RNA–Protein interactions for RNA: ENST00000398417.6

SMAD4-202, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-202ENST00000398417 KNL1Q8NG31 2342 aa5.2□□□□□ -1.58
SMAD4-202ENST00000398417 F8VP50 259 aa5.2□□□□□ -1.58
SMAD4-202ENST00000398417 GZMAP12544 262 aa5.2□□□□□ -1.58
SMAD4-202ENST00000398417 SESN3P58005 492 aa5.2□□□□□ -1.58
SMAD4-202ENST00000398417 NCOA4Q13772 614 aa5.2□□□□□ -1.58
SMAD4-202ENST00000398417 TFDP1Q14186 410 aa5.2□□□□□ -1.58
SMAD4-202ENST00000398417 VSTM1Q6UX27 236 aa5.2□□□□□ -1.58
SMAD4-202ENST00000398417 ZC3H18Q86VM9 953 aaKnown RBP5.2□□□□□ -1.58
SMAD4-202ENST00000398417 SLC9A9Q8IVB4 645 aa5.2□□□□□ -1.58
SMAD4-202ENST00000398417 TRAPPC12Q8WVT3 735 aa5.2□□□□□ -1.58
SMAD4-202ENST00000398417 TLCD1Q96CP7 247 aa5.2□□□□□ -1.58
SMAD4-202ENST00000398417 KIAA1683Q9H0B3 1180 aa5.2□□□□□ -1.58
SMAD4-202ENST00000398417 YY1AP1Q9H869 796 aa5.2□□□□□ -1.58
SMAD4-202ENST00000398417 KIF1AQ12756 1690 aa5.2□□□□□ -1.58
SMAD4-202ENST00000398417 DNALI1O14645 258 aaPredicted RBP5.2□□□□□ -1.58
SMAD4-202ENST00000398417 HAUS5O94927 633 aa5.2□□□□□ -1.58
SMAD4-202ENST00000398417 GLRA2P23416 452 aa5.2□□□□□ -1.58
SMAD4-202ENST00000398417 YARSP54577 528 aaKnown RBP5.2□□□□□ -1.58
SMAD4-202ENST00000398417 SMTNL2Q2TAL5 461 aa5.2□□□□□ -1.58
SMAD4-202ENST00000398417 ZNF667Q5HYK9 610 aa5.2□□□□□ -1.58
SMAD4-202ENST00000398417 ENOSF1Q7L5Y1 443 aa5.2□□□□□ -1.58
SMAD4-202ENST00000398417 TRPM8Q7Z2W7 1104 aa5.2□□□□□ -1.58
SMAD4-202ENST00000398417 CCDC60Q8IWA6 550 aaPredicted RBP5.2□□□□□ -1.58
SMAD4-202ENST00000398417 PPP1R13LQ8WUF5 828 aa5.2□□□□□ -1.58
SMAD4-202ENST00000398417 SEPT1Q8WYJ6 367 aa5.2□□□□□ -1.58
SMAD4-202ENST00000398417 N4BP2L2Q92802 583 aaPredicted RBP5.2□□□□□ -1.58
SMAD4-202ENST00000398417 NLRP4Q96MN2 994 aa5.2□□□□□ -1.58
SMAD4-202ENST00000398417 PARVAQ9NVD7 372 aa5.2□□□□□ -1.58
SMAD4-202ENST00000398417 RPTORQ8N122 1335 aa5.2□□□□□ -1.58
SMAD4-202ENST00000398417 VWA5AO00534 786 aa5.2□□□□□ -1.58
SMAD4-202ENST00000398417 DIAPH2O60879 1101 aa5.2□□□□□ -1.58
SMAD4-202ENST00000398417 NQO1P15559 274 aaKnown RBP5.2□□□□□ -1.58
SMAD4-202ENST00000398417 DSG3P32926 999 aa5.2□□□□□ -1.58
SMAD4-202ENST00000398417 ARL4CP56559 192 aa5.2□□□□□ -1.58
SMAD4-202ENST00000398417 YWHAEP62258 255 aaKnown RBP5.2□□□□□ -1.58
SMAD4-202ENST00000398417 NOMO3P69849 1222 aa5.2□□□□□ -1.58
SMAD4-202ENST00000398417 PSMD6Q15008 389 aa5.2□□□□□ -1.58
SMAD4-202ENST00000398417 C1orf220Q5T0J3 134 aa5.2□□□□□ -1.58
SMAD4-202ENST00000398417 MIS12Q9H081 205 aa5.2□□□□□ -1.58
SMAD4-202ENST00000398417 RNF19AQ9NV58 838 aa5.2□□□□□ -1.58
SMAD4-202ENST00000398417 MYPNQ86TC9 1320 aa5.2□□□□□ -1.58
SMAD4-202ENST00000398417 CST8O60676 142 aa5.2□□□□□ -1.58
SMAD4-202ENST00000398417 TCF4P15884 667 aa5.2□□□□□ -1.58
SMAD4-202ENST00000398417 TCF7P36402 384 aaPredicted RBP5.2□□□□□ -1.58
SMAD4-202ENST00000398417 POU5F1Q01860 360 aaKnown RBP5.2□□□□□ -1.58
SMAD4-202ENST00000398417 ERMARDQ5T6L9 678 aa5.2□□□□□ -1.58
SMAD4-202ENST00000398417 TMEM130Q8N3G9 435 aa5.2□□□□□ -1.58
SMAD4-202ENST00000398417 PPM1NQ8N819 430 aa5.2□□□□□ -1.58
SMAD4-202ENST00000398417 LMO3Q8TAP4 145 aa5.2□□□□□ -1.58
SMAD4-202ENST00000398417 COPS5Q92905 334 aa5.2□□□□□ -1.58
SMAD4-202ENST00000398417 SENP7Q9BQF6 1050 aa5.2□□□□□ -1.58
SMAD4-202ENST00000398417 DEFB129Q9H1M3 183 aa5.2□□□□□ -1.58
SMAD4-202ENST00000398417 KIF9Q9HAQ2 790 aa5.2□□□□□ -1.58
SMAD4-202ENST00000398417 SLC38A10Q9HBR0 1119 aa5.2□□□□□ -1.58
SMAD4-202ENST00000398417 XPNPEP1Q9NQW7 623 aa5.2□□□□□ -1.58
SMAD4-202ENST00000398417 DNM1LO00429 736 aa5.2□□□□□ -1.58
SMAD4-202ENST00000398417 CSDE1O75534 798 aaKnown RBP5.2□□□□□ -1.58
SMAD4-202ENST00000398417 RNF8O76064 485 aa5.2□□□□□ -1.58
SMAD4-202ENST00000398417 KRT3P12035 628 aa5.2□□□□□ -1.58
SMAD4-202ENST00000398417 ADSSP30520 456 aa5.2□□□□□ -1.58
SMAD4-202ENST00000398417 LMNB2Q03252 620 aa5.2□□□□□ -1.58
SMAD4-202ENST00000398417 CCNG2Q16589 344 aa5.2□□□□□ -1.58
SMAD4-202ENST00000398417 DALRD3Q5D0E6 543 aaKnown RBP5.2□□□□□ -1.58
SMAD4-202ENST00000398417 ANGEL2Q5VTE6 544 aaKnown RBP5.2□□□□□ -1.58
SMAD4-202ENST00000398417 KCNV1Q6PIU1 500 aa5.2□□□□□ -1.58
SMAD4-202ENST00000398417 NPNTQ6UXI9 565 aa5.2□□□□□ -1.58
SMAD4-202ENST00000398417 FBXO36Q8NEA4 188 aa5.2□□□□□ -1.58
SMAD4-202ENST00000398417 SERPINB12Q96P63 405 aa5.2□□□□□ -1.58
SMAD4-202ENST00000398417 ADPGKQ9BRR6 497 aa5.2□□□□□ -1.58
SMAD4-202ENST00000398417 SLC12A6Q9UHW9 1150 aa5.2□□□□□ -1.58
SMAD4-202ENST00000398417 EVPLQ92817 2033 aa5.2□□□□□ -1.58
SMAD4-202ENST00000398417 ZWINTO95229 277 aa5.2□□□□□ -1.58
SMAD4-202ENST00000398417 EGFRP00533 1210 aa5.2□□□□□ -1.58
SMAD4-202ENST00000398417 NUDT17P0C025 328 aa5.2□□□□□ -1.58
SMAD4-202ENST00000398417 POLR2BP30876 1174 aaKnown RBP5.2□□□□□ -1.58
SMAD4-202ENST00000398417 PCK1P35558 622 aa5.2□□□□□ -1.58
SMAD4-202ENST00000398417 GCLCP48506 637 aaPredicted RBP5.2□□□□□ -1.58
SMAD4-202ENST00000398417 DNAJC3Q13217 504 aa5.2□□□□□ -1.58
SMAD4-202ENST00000398417 NEDD9Q14511 834 aa5.2□□□□□ -1.58
SMAD4-202ENST00000398417 PPP2R5DQ14738 602 aa5.2□□□□□ -1.58
SMAD4-202ENST00000398417 ZNF699Q32M78 642 aa5.2□□□□□ -1.58
SMAD4-202ENST00000398417 ZNF568Q3ZCX4 644 aa5.2□□□□□ -1.58
SMAD4-202ENST00000398417 DLK2Q6UY11 383 aa5.2□□□□□ -1.58
SMAD4-202ENST00000398417 SYDE1Q6ZW31 735 aaPredicted RBP5.2□□□□□ -1.58
SMAD4-202ENST00000398417 C12orf56Q8IXR9 622 aa5.2□□□□□ -1.58
SMAD4-202ENST00000398417 ZNF516Q92618 1163 aa5.2□□□□□ -1.58
SMAD4-202ENST00000398417 ERP27Q96DN0 273 aa5.2□□□□□ -1.58
SMAD4-202ENST00000398417 FHDC1Q9C0D6 1143 aaPredicted RBP5.2□□□□□ -1.58
SMAD4-202ENST00000398417 GEMIN8Q9NWZ8 242 aaKnown RBP5.2□□□□□ -1.58
SMAD4-202ENST00000398417 SAE1Q9UBE0 346 aaPredicted RBP5.2□□□□□ -1.58
SMAD4-202ENST00000398417 AGAP1Q9UPQ3 857 aa5.2□□□□□ -1.58
SMAD4-202ENST00000398417 ZNF536O15090 1300 aa5.2□□□□□ -1.58
SMAD4-202ENST00000398417 A8MUI8 341 aa5.19□□□□□ -1.58
SMAD4-202ENST00000398417 MAP3K6O95382 1288 aa5.19□□□□□ -1.58
SMAD4-202ENST00000398417 GJB1P08034 283 aa5.19□□□□□ -1.58
SMAD4-202ENST00000398417 GARTP22102 1010 aa5.19□□□□□ -1.58
SMAD4-202ENST00000398417 PHBP35232 272 aa5.19□□□□□ -1.58
SMAD4-202ENST00000398417 LVRNQ6Q4G3 990 aa5.19□□□□□ -1.58
SMAD4-202ENST00000398417 NIPA1Q7RTP0 329 aa5.19□□□□□ -1.58
SMAD4-202ENST00000398417 TRIM50Q86XT4 487 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms