RNA–Protein interactions for RNA: ENST00000398043.2

APTR-201, Transcript of Alu-mediated CDKN1A/p21 transcriptional regulator, humanhuman

TSL 1 (best)

Gene APTR, Length 528 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTR-201ENST00000398043 LRRC52Q8N7C0 313 aa18.02■□□□□ 0.48
APTR-201ENST00000398043 TDRD5Q8NAT2 981 aaKnown RBP18.02■□□□□ 0.48
APTR-201ENST00000398043 RDH13Q8NBN7 331 aa18.02■□□□□ 0.48
APTR-201ENST00000398043 SPATA20Q8TB22 786 aa18.02■□□□□ 0.48
APTR-201ENST00000398043 GOLGA5Q8TBA6 731 aa18.02■□□□□ 0.48
APTR-201ENST00000398043 PLEKHO2Q8TD55 490 aa18.02■□□□□ 0.48
APTR-201ENST00000398043 NOC3LQ8WTT2 800 aaKnown RBP18.02■□□□□ 0.48
APTR-201ENST00000398043 TSHZ2Q9NRE2 1034 aa18.02■□□□□ 0.48
APTR-201ENST00000398043 AFF4Q9UHB7 1163 aaKnown RBP18.02■□□□□ 0.48
APTR-201ENST00000398043 MAFFQ9ULX9 164 aa18.02■□□□□ 0.48
APTR-201ENST00000398043 AGAP1Q9UPQ3 857 aa18.02■□□□□ 0.48
APTR-201ENST00000398043 TRAF3IP3Q9Y228 551 aa18.02■□□□□ 0.48
APTR-201ENST00000398043 OR6C75A6NL08 312 aa18.01■□□□□ 0.47
APTR-201ENST00000398043 CYB561D2O14569 222 aa18.01■□□□□ 0.47
APTR-201ENST00000398043 CCL16O15467 120 aa18.01■□□□□ 0.47
APTR-201ENST00000398043 GPR37L1O60883 481 aa18.01■□□□□ 0.47
APTR-201ENST00000398043 OR4Q2P0C623 313 aa18.01■□□□□ 0.47
APTR-201ENST00000398043 PNPLA4P41247 253 aa18.01■□□□□ 0.47
APTR-201ENST00000398043 ARPP19P56211 112 aa18.01■□□□□ 0.47
APTR-201ENST00000398043 GPR17Q13304 367 aa18.01■□□□□ 0.47
APTR-201ENST00000398043 PNOCQ13519 176 aa18.01■□□□□ 0.47
APTR-201ENST00000398043 MYBPC2Q14324 1141 aa18.01■□□□□ 0.47
APTR-201ENST00000398043 SV2CQ496J9 727 aa18.01■□□□□ 0.47
APTR-201ENST00000398043 OTOP3Q7RTS5 596 aa18.01■□□□□ 0.47
APTR-201ENST00000398043 LIMS2Q7Z4I7 341 aa18.01■□□□□ 0.47
APTR-201ENST00000398043 PLCD3Q8N3E9 789 aa18.01■□□□□ 0.47
APTR-201ENST00000398043 CSGALNACT2Q8N6G5 542 aa18.01■□□□□ 0.47
APTR-201ENST00000398043 OR10T2Q8NGX3 314 aa18.01■□□□□ 0.47
APTR-201ENST00000398043 ZNF516Q92618 1163 aa18.01■□□□□ 0.47
APTR-201ENST00000398043 ZNF560Q96MR9 790 aa18.01■□□□□ 0.47
APTR-201ENST00000398043 TIGD1Q96MW7 591 aa18.01■□□□□ 0.47
APTR-201ENST00000398043 MYADMQ96S97 322 aa18.01■□□□□ 0.47
APTR-201ENST00000398043 TMEM209Q96SK2 561 aa18.01■□□□□ 0.47
APTR-201ENST00000398043 C1QTNF1Q9BXJ1 281 aa18.01■□□□□ 0.47
APTR-201ENST00000398043 GDAP2Q9NXN4 497 aa18.01■□□□□ 0.47
APTR-201ENST00000398043 DNMT3BQ9UBC3 853 aaKnown RBP18.01■□□□□ 0.47
APTR-201ENST00000398043 GOLGA6L4A6NEF3 574 aa18■□□□□ 0.47
APTR-201ENST00000398043 TMEM191BP0C7N4 346 aa18■□□□□ 0.47
APTR-201ENST00000398043 CLDN10P78369 228 aa18■□□□□ 0.47
APTR-201ENST00000398043 NTHL1P78549 312 aa18■□□□□ 0.47
APTR-201ENST00000398043 ADCY1Q08828 1119 aa18■□□□□ 0.47
APTR-201ENST00000398043 PTPN21Q16825 1174 aa18■□□□□ 0.47
APTR-201ENST00000398043 DUOXA2Q1HG44 320 aa18■□□□□ 0.47
APTR-201ENST00000398043 WSCD1Q658N2 575 aa18■□□□□ 0.47
APTR-201ENST00000398043 GRASPQ7Z6J2 395 aaPredicted RBP18■□□□□ 0.47
APTR-201ENST00000398043 USP37Q86T82 979 aa18■□□□□ 0.47
APTR-201ENST00000398043 ELOA2Q8IYF1 753 aaPredicted RBP18■□□□□ 0.47
APTR-201ENST00000398043 GUF1Q8N442 669 aaKnown RBP18■□□□□ 0.47
APTR-201ENST00000398043 EDAQ92838 391 aa18■□□□□ 0.47
APTR-201ENST00000398043 CGRRF1Q99675 332 aa18■□□□□ 0.47
APTR-201ENST00000398043 CRISPLD1Q9H336 500 aa18■□□□□ 0.47
APTR-201ENST00000398043 PIDD1Q9HB75 910 aa18■□□□□ 0.47
APTR-201ENST00000398043 HCFC1R1Q9NWW0 138 aa18■□□□□ 0.47
APTR-201ENST00000398043 DSEQ9UL01 958 aa18■□□□□ 0.47
APTR-201ENST00000398043 INSL5Q9Y5Q6 135 aa18■□□□□ 0.47
APTR-201ENST00000398043 ZNF638Q14966 1978 aaKnown RBP17.99■□□□□ 0.47
APTR-201ENST00000398043 GADD45BO75293 160 aaPredicted RBP17.99■□□□□ 0.47
APTR-201ENST00000398043 NR3C1P04150 777 aa17.99■□□□□ 0.47
APTR-201ENST00000398043 CPB1P15086 417 aa17.99■□□□□ 0.47
APTR-201ENST00000398043 CASP4P49662 377 aa17.99■□□□□ 0.47
APTR-201ENST00000398043 RBP5P82980 135 aa17.99■□□□□ 0.47
APTR-201ENST00000398043 ZXDAP98168 799 aa17.99■□□□□ 0.47
APTR-201ENST00000398043 NFIL3Q16649 462 aa17.99■□□□□ 0.47
APTR-201ENST00000398043 ZCWPW2Q504Y3 356 aa17.99■□□□□ 0.47
APTR-201ENST00000398043 TRAPPC11Q7Z392 1133 aa17.99■□□□□ 0.47
APTR-201ENST00000398043 ANKRD36BP1Q96IX9 119 aa17.99■□□□□ 0.47
APTR-201ENST00000398043 ZCWPW1Q9H0M4 648 aa17.99■□□□□ 0.47
APTR-201ENST00000398043 AVENQ9NQS1 362 aaPredicted RBP17.99■□□□□ 0.47
APTR-201ENST00000398043 CHMP5Q9NZZ3 219 aa17.99■□□□□ 0.47
APTR-201ENST00000398043 EPS15L1Q9UBC2 864 aa17.99■□□□□ 0.47
APTR-201ENST00000398043 LIMD1Q9UGP4 676 aa17.99■□□□□ 0.47
APTR-201ENST00000398043 L1RE1Q9UN81 338 aa17.99■□□□□ 0.47
APTR-201ENST00000398043 ZDBF2Q9HCK1 2354 aa17.98■□□□□ 0.47
APTR-201ENST00000398043 ANAPC1Q9H1A4 1944 aa17.98■□□□□ 0.47
APTR-201ENST00000398043 EXOC3O60645 756 aa17.98■□□□□ 0.47
APTR-201ENST00000398043 XYLBO75191 536 aa17.98■□□□□ 0.47
APTR-201ENST00000398043 CST3P01034 146 aaPredicted RBP17.98■□□□□ 0.47
APTR-201ENST00000398043 MCCD1P59942 119 aaPredicted RBP17.98■□□□□ 0.47
APTR-201ENST00000398043 CENPPQ6IPU0 288 aa17.98■□□□□ 0.47
APTR-201ENST00000398043 LRRTM3Q86VH5 581 aa17.98■□□□□ 0.47
APTR-201ENST00000398043 PDCL2Q8N4E4 241 aa17.98■□□□□ 0.47
APTR-201ENST00000398043 PARD3BQ8TEW8 1205 aa17.98■□□□□ 0.47
APTR-201ENST00000398043 CCDC47Q96A33 483 aaKnown RBP17.98■□□□□ 0.47
APTR-201ENST00000398043 ACSF2Q96CM8 615 aaPredicted RBP17.98■□□□□ 0.47
APTR-201ENST00000398043 GSDMAQ96QA5 445 aa17.98■□□□□ 0.47
APTR-201ENST00000398043 LRFN3Q9BTN0 628 aa17.98■□□□□ 0.47
APTR-201ENST00000398043 CYP4F11Q9HBI6 524 aa17.98■□□□□ 0.47
APTR-201ENST00000398043 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.98■□□□□ 0.47
APTR-201ENST00000398043 MAPK8IP1Q9UQF2 711 aa17.98■□□□□ 0.47
APTR-201ENST00000398043 PCDHA5Q9Y5H7 936 aa17.98■□□□□ 0.47
APTR-201ENST00000398043 KMT2EQ8IZD2 1858 aa17.98■□□□□ 0.47
APTR-201ENST00000398043 MTMR11A4FU01 709 aa17.97■□□□□ 0.47
APTR-201ENST00000398043 FAM86C2PA6NEL3 165 aa17.97■□□□□ 0.47
APTR-201ENST00000398043 PRRG1O14668 218 aa17.97■□□□□ 0.47
APTR-201ENST00000398043 PRPF40AO75400 957 aaKnown RBP17.97■□□□□ 0.47
APTR-201ENST00000398043 TNNC2P02585 160 aa17.97■□□□□ 0.47
APTR-201ENST00000398043 ASGR2P07307 311 aa17.97■□□□□ 0.47
APTR-201ENST00000398043 DLATP10515 647 aaKnown RBP17.97■□□□□ 0.47
APTR-201ENST00000398043 FSHRP23945 695 aa17.97■□□□□ 0.47
APTR-201ENST00000398043 ELF1P32519 619 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms