RNA–Protein interactions for RNA: ENST00000398005.3

HMGN2P39-201, Transcript of high mobility group nucleosomal binding domain 2 pseudogene 39, humanhuman

BASIC

Gene HMGN2P39, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN2P39-201ENST00000398005 ANKRD1Q15327 319 aa2.35□□□□□ -2.03
HMGN2P39-201ENST00000398005 RPS6KA2Q15349 733 aa2.35□□□□□ -2.03
HMGN2P39-201ENST00000398005 UBE3CQ15386 1083 aa2.35□□□□□ -2.03
HMGN2P39-201ENST00000398005 TARBP2Q15633 366 aaKnown RBP2.35□□□□□ -2.03
HMGN2P39-201ENST00000398005 AOC3Q16853 763 aa2.35□□□□□ -2.03
HMGN2P39-201ENST00000398005 TMEM266Q2M3C6 531 aa2.35□□□□□ -2.03
HMGN2P39-201ENST00000398005 CTXN3Q4LDR2 81 aa2.35□□□□□ -2.03
HMGN2P39-201ENST00000398005 DNAJC21Q5F1R6 531 aaKnown RBP2.35□□□□□ -2.03
HMGN2P39-201ENST00000398005 PRRT3Q5FWE3 981 aa2.35□□□□□ -2.03
HMGN2P39-201ENST00000398005 SLC10A5Q5PT55 438 aa2.35□□□□□ -2.03
HMGN2P39-201ENST00000398005 UBXN11Q5T124 520 aa2.35□□□□□ -2.03
HMGN2P39-201ENST00000398005 ATPAF1Q5TC12 328 aaPredicted RBP2.35□□□□□ -2.03
HMGN2P39-201ENST00000398005 ATG16L1Q676U5 607 aa2.35□□□□□ -2.03
HMGN2P39-201ENST00000398005 NFRKBQ6P4R8 1299 aa2.35□□□□□ -2.03
HMGN2P39-201ENST00000398005 ZNF449Q6P9G9 518 aa2.35□□□□□ -2.03
HMGN2P39-201ENST00000398005 SLC22A25Q6T423 547 aa2.35□□□□□ -2.03
HMGN2P39-201ENST00000398005 SEZ6L2Q6UXD5 910 aa2.35□□□□□ -2.03
HMGN2P39-201ENST00000398005 TMTC3Q6ZXV5 915 aa2.35□□□□□ -2.03
HMGN2P39-201ENST00000398005 FAM214BQ7L5A3 538 aa2.35□□□□□ -2.03
HMGN2P39-201ENST00000398005 CCDC91Q7Z6B0 441 aa2.35□□□□□ -2.03
HMGN2P39-201ENST00000398005 DNAJB7Q7Z6W7 309 aaPredicted RBP2.35□□□□□ -2.03
HMGN2P39-201ENST00000398005 NBPF11Q86T75 865 aa2.35□□□□□ -2.03
HMGN2P39-201ENST00000398005 CABP7Q86V35 215 aa2.35□□□□□ -2.03
HMGN2P39-201ENST00000398005 MICU3Q86XE3 530 aa2.35□□□□□ -2.03
HMGN2P39-201ENST00000398005 ARMC8Q8IUR7 673 aa2.35□□□□□ -2.03
HMGN2P39-201ENST00000398005 SLC44A2Q8IWA5 706 aaPredicted RBP2.35□□□□□ -2.03
HMGN2P39-201ENST00000398005 LMNTD2Q8IXW0 634 aa2.35□□□□□ -2.03
HMGN2P39-201ENST00000398005 RPAP2Q8IXW5 612 aaPredicted RBP2.35□□□□□ -2.03
HMGN2P39-201ENST00000398005 YAF2Q8IY57 180 aa2.35□□□□□ -2.03
HMGN2P39-201ENST00000398005 CEP57L1Q8IYX8 460 aa2.35□□□□□ -2.03
HMGN2P39-201ENST00000398005 TRMT2AQ8IZ69 625 aaKnown RBP2.35□□□□□ -2.03
HMGN2P39-201ENST00000398005 TOR1AIP2Q8NFQ8 470 aa2.35□□□□□ -2.03
HMGN2P39-201ENST00000398005 OR6Y1Q8NGX8 325 aa2.35□□□□□ -2.03
HMGN2P39-201ENST00000398005 SCAMP5Q8TAC9 235 aa2.35□□□□□ -2.03
HMGN2P39-201ENST00000398005 KCNG4Q8TDN1 519 aa2.35□□□□□ -2.03
HMGN2P39-201ENST00000398005 TBC1D22AQ8WUA7 517 aa2.35□□□□□ -2.03
HMGN2P39-201ENST00000398005 BCL7CQ8WUZ0 217 aaPredicted RBP2.35□□□□□ -2.03
HMGN2P39-201ENST00000398005 SEC14L1Q92503 715 aa2.35□□□□□ -2.03
HMGN2P39-201ENST00000398005 MAML1Q92585 1016 aa2.35□□□□□ -2.03
HMGN2P39-201ENST00000398005 CUL5Q93034 780 aa2.35□□□□□ -2.03
HMGN2P39-201ENST00000398005 CCDC47Q96A33 483 aaKnown RBP2.35□□□□□ -2.03
HMGN2P39-201ENST00000398005 SH3KBP1Q96B97 665 aa2.35□□□□□ -2.03
HMGN2P39-201ENST00000398005 C3orf49Q96BT1 292 aa2.35□□□□□ -2.03
HMGN2P39-201ENST00000398005 CALML4Q96GE6 196 aa2.35□□□□□ -2.03
HMGN2P39-201ENST00000398005 MRGPRX4Q96LA9 322 aa2.35□□□□□ -2.03
HMGN2P39-201ENST00000398005 HEXIM2Q96MH2 286 aaKnown RBP2.35□□□□□ -2.03
HMGN2P39-201ENST00000398005 HSPA12BQ96MM6 686 aa2.35□□□□□ -2.03
HMGN2P39-201ENST00000398005 TWNKQ96RR1 684 aa2.35□□□□□ -2.03
HMGN2P39-201ENST00000398005 JMJD8Q96S16 334 aa2.35□□□□□ -2.03
HMGN2P39-201ENST00000398005 MXD3Q9BW11 206 aa2.35□□□□□ -2.03
HMGN2P39-201ENST00000398005 KRTAP4-7Q9BYR0 210 aa2.35□□□□□ -2.03
HMGN2P39-201ENST00000398005 OSBPL6Q9BZF3 934 aa2.35□□□□□ -2.03
HMGN2P39-201ENST00000398005 ARHGAP39Q9C0H5 1083 aa2.35□□□□□ -2.03
HMGN2P39-201ENST00000398005 AP5M1Q9H0R1 490 aa2.35□□□□□ -2.03
HMGN2P39-201ENST00000398005 PCDHAC1Q9H158 963 aa2.35□□□□□ -2.03
HMGN2P39-201ENST00000398005 CHST8Q9H2A9 424 aa2.35□□□□□ -2.03
HMGN2P39-201ENST00000398005 ADAM7Q9H2U9 754 aa2.35□□□□□ -2.03
HMGN2P39-201ENST00000398005 MRPL46Q9H2W6 279 aaKnown RBP2.35□□□□□ -2.03
HMGN2P39-201ENST00000398005 PABPC3Q9H361 631 aaKnown RBP2.35□□□□□ -2.03
HMGN2P39-201ENST00000398005 EPS8L2Q9H6S3 715 aa2.35□□□□□ -2.03
HMGN2P39-201ENST00000398005 AKTIPQ9H8T0 292 aa2.35□□□□□ -2.03
HMGN2P39-201ENST00000398005 CHODLQ9H9P2 273 aa2.35□□□□□ -2.03
HMGN2P39-201ENST00000398005 SMURF2Q9HAU4 748 aa2.35□□□□□ -2.03
HMGN2P39-201ENST00000398005 MKNK2Q9HBH9 465 aa2.35□□□□□ -2.03
HMGN2P39-201ENST00000398005 TMEM8AQ9HCN3 771 aa2.35□□□□□ -2.03
HMGN2P39-201ENST00000398005 CCDC177Q9NQR7 707 aaPredicted RBP2.35□□□□□ -2.03
HMGN2P39-201ENST00000398005 PRDM8Q9NQV8 689 aa2.35□□□□□ -2.03
HMGN2P39-201ENST00000398005 ABCF3Q9NUQ8 709 aa2.35□□□□□ -2.03
HMGN2P39-201ENST00000398005 SEPT11Q9NVA2 429 aaKnown RBP2.35□□□□□ -2.03
HMGN2P39-201ENST00000398005 TMOD4Q9NZQ9 345 aa2.35□□□□□ -2.03
HMGN2P39-201ENST00000398005 TNFRSF10DQ9UBN6 386 aa2.35□□□□□ -2.03
HMGN2P39-201ENST00000398005 MID2Q9UJV3 735 aa2.35□□□□□ -2.03
HMGN2P39-201ENST00000398005 USP21Q9UK80 565 aa2.35□□□□□ -2.03
HMGN2P39-201ENST00000398005 ZNF215Q9UL58 517 aaPredicted RBP2.35□□□□□ -2.03
HMGN2P39-201ENST00000398005 TMCC3Q9ULS5 477 aa2.35□□□□□ -2.03
HMGN2P39-201ENST00000398005 TMEM5Q9Y2B1 443 aa2.35□□□□□ -2.03
HMGN2P39-201ENST00000398005 ZNF711Q9Y462 761 aa2.35□□□□□ -2.03
HMGN2P39-201ENST00000398005 HS3ST4Q9Y661 456 aa2.35□□□□□ -2.03
HMGN2P39-201ENST00000398005 CYP46A1Q9Y6A2 500 aa2.35□□□□□ -2.03
HMGN2P39-201ENST00000398005 SOS1Q07889 1333 aaPredicted RBP2.35□□□□□ -2.03
HMGN2P39-201ENST00000398005 RPTORQ8N122 1335 aa2.35□□□□□ -2.03
HMGN2P39-201ENST00000398005 MYBBP1AQ9BQG0 1328 aaKnown RBP2.35□□□□□ -2.03
HMGN2P39-201ENST00000398005 KAT6BQ8WYB5 2073 aa2.35□□□□□ -2.03
HMGN2P39-201ENST00000398005 LMTK3Q96Q04 1460 aa2.34□□□□□ -2.03
HMGN2P39-201ENST00000398005 A0A0A6YYJ9 748 aa2.34□□□□□ -2.03
HMGN2P39-201ENST00000398005 TCRBV5S2A0A599 114 aa2.34□□□□□ -2.03
HMGN2P39-201ENST00000398005 CCDC78A2IDD5 438 aa2.34□□□□□ -2.03
HMGN2P39-201ENST00000398005 MBD3L4A6NDZ8 208 aaPredicted RBP2.34□□□□□ -2.03
HMGN2P39-201ENST00000398005 MBD3L3A6NE82 208 aaPredicted RBP2.34□□□□□ -2.03
HMGN2P39-201ENST00000398005 TMEM233B4DJY2 109 aa2.34□□□□□ -2.03
HMGN2P39-201ENST00000398005 E7EVH7 732 aa2.34□□□□□ -2.03
HMGN2P39-201ENST00000398005 MYO1CO00159 1063 aa2.34□□□□□ -2.03
HMGN2P39-201ENST00000398005 RAB27BO00194 218 aa2.34□□□□□ -2.03
HMGN2P39-201ENST00000398005 F2RL2O00254 374 aa2.34□□□□□ -2.03
HMGN2P39-201ENST00000398005 IGF2BP3O00425 579 aaKnown RBP eCLIP2.34□□□□□ -2.03
HMGN2P39-201ENST00000398005 FYB1O15117 783 aa2.34□□□□□ -2.03
HMGN2P39-201ENST00000398005 HYAL3O43820 417 aaPredicted RBP2.34□□□□□ -2.03
HMGN2P39-201ENST00000398005 PHF2O75151 1096 aa2.34□□□□□ -2.03
HMGN2P39-201ENST00000398005 TGDSO95455 350 aa2.34□□□□□ -2.03
HMGN2P39-201ENST00000398005 SGPL1O95470 568 aa2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms