RNA–Protein interactions for RNA: ENST00000397998.7

CSGALNACT1-202, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 2

Gene CSGALNACT1, Length 3,962 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-202ENST00000397998 TRPA1O75762 1119 aa11.7□□□□□ -0.54
CSGALNACT1-202ENST00000397998 EIF3EP60228 445 aaKnown RBP11.7□□□□□ -0.54
CSGALNACT1-202ENST00000397998 YWHAEP62258 255 aaKnown RBP11.7□□□□□ -0.54
CSGALNACT1-202ENST00000397998 KCNT1Q5JUK3 1230 aa11.7□□□□□ -0.54
CSGALNACT1-202ENST00000397998 MFSD5Q6N075 450 aa11.7□□□□□ -0.54
CSGALNACT1-202ENST00000397998 PTF1AQ7RTS3 328 aa11.7□□□□□ -0.54
CSGALNACT1-202ENST00000397998 RASSF3Q86WH2 238 aa11.7□□□□□ -0.54
CSGALNACT1-202ENST00000397998 TTC8Q8TAM2 541 aa11.7□□□□□ -0.54
CSGALNACT1-202ENST00000397998 JDP2Q8WYK2 163 aa11.7□□□□□ -0.54
CSGALNACT1-202ENST00000397998 HSD17B14Q9BPX1 270 aa11.7□□□□□ -0.54
CSGALNACT1-202ENST00000397998 WDR18Q9BV38 432 aa11.7□□□□□ -0.54
CSGALNACT1-202ENST00000397998 POLR3FQ9H1D9 316 aaPredicted RBP11.7□□□□□ -0.54
CSGALNACT1-202ENST00000397998 CYP39A1Q9NYL5 469 aa11.7□□□□□ -0.54
CSGALNACT1-202ENST00000397998 XPO7Q9UIA9 1087 aaKnown RBP11.7□□□□□ -0.54
CSGALNACT1-202ENST00000397998 ECE2O60344 883 aa11.7□□□□□ -0.54
CSGALNACT1-202ENST00000397998 RFC5P40937 340 aa11.7□□□□□ -0.54
CSGALNACT1-202ENST00000397998 PSMC1P62191 440 aaKnown RBP11.7□□□□□ -0.54
CSGALNACT1-202ENST00000397998 ATP13A4Q4VNC1 1196 aa11.7□□□□□ -0.54
CSGALNACT1-202ENST00000397998 PPP6R3Q5H9R7 873 aaPredicted RBP11.7□□□□□ -0.54
CSGALNACT1-202ENST00000397998 RNF43Q68DV7 783 aa11.7□□□□□ -0.54
CSGALNACT1-202ENST00000397998 OR6B2Q6IFH4 312 aa11.7□□□□□ -0.54
CSGALNACT1-202ENST00000397998 PPP1R2P3Q6NXS1 205 aa11.7□□□□□ -0.54
CSGALNACT1-202ENST00000397998 PIP4K2CQ8TBX8 421 aa11.7□□□□□ -0.54
CSGALNACT1-202ENST00000397998 ZNF75CPQ92670 426 aaPredicted RBP11.7□□□□□ -0.54
CSGALNACT1-202ENST00000397998 MTBPQ96DY7 904 aa11.7□□□□□ -0.54
CSGALNACT1-202ENST00000397998 ZNF668Q96K58 619 aaPredicted RBP11.7□□□□□ -0.54
CSGALNACT1-202ENST00000397998 R3HDM2Q9Y2K5 976 aaKnown RBP11.7□□□□□ -0.54
CSGALNACT1-202ENST00000397998 PIK3CDO00329 1044 aa11.7□□□□□ -0.54
CSGALNACT1-202ENST00000397998 PFDN1O60925 122 aa11.7□□□□□ -0.54
CSGALNACT1-202ENST00000397998 SRGAP2CP0DJJ0 459 aa11.7□□□□□ -0.54
CSGALNACT1-202ENST00000397998 MYL2P10916 166 aa11.7□□□□□ -0.54
CSGALNACT1-202ENST00000397998 NPR1P16066 1061 aa11.7□□□□□ -0.54
CSGALNACT1-202ENST00000397998 TAC1P20366 129 aa11.7□□□□□ -0.54
CSGALNACT1-202ENST00000397998 PSMC4P43686 418 aa11.7□□□□□ -0.54
CSGALNACT1-202ENST00000397998 PTDSS1P48651 473 aaKnown RBP11.7□□□□□ -0.54
CSGALNACT1-202ENST00000397998 CLK2P49760 499 aaKnown RBP11.7□□□□□ -0.54
CSGALNACT1-202ENST00000397998 RARRES1P49788 294 aa11.7□□□□□ -0.54
CSGALNACT1-202ENST00000397998 PAPOLAP51003 745 aaKnown RBP11.7□□□□□ -0.54
CSGALNACT1-202ENST00000397998 KRT76Q01546 638 aa11.7□□□□□ -0.54
CSGALNACT1-202ENST00000397998 SEZ6Q53EL9 994 aa11.7□□□□□ -0.54
CSGALNACT1-202ENST00000397998 RABGAP1LQ5R372 815 aa11.7□□□□□ -0.54
CSGALNACT1-202ENST00000397998 TCP10LQ8TDR4 215 aa11.7□□□□□ -0.54
CSGALNACT1-202ENST00000397998 PAFAH2Q99487 392 aa11.7□□□□□ -0.54
CSGALNACT1-202ENST00000397998 C10orf88Q9H8K7 445 aa11.7□□□□□ -0.54
CSGALNACT1-202ENST00000397998 SEPT10Q9P0V9 454 aa11.7□□□□□ -0.54
CSGALNACT1-202ENST00000397998 GAKO14976 1311 aa11.69□□□□□ -0.54
CSGALNACT1-202ENST00000397998 KIF3CO14782 793 aa11.69□□□□□ -0.54
CSGALNACT1-202ENST00000397998 ATP9AO75110 1047 aa11.69□□□□□ -0.54
CSGALNACT1-202ENST00000397998 KRT38O76015 456 aa11.69□□□□□ -0.54
CSGALNACT1-202ENST00000397998 TFDP1Q14186 410 aa11.69□□□□□ -0.54
CSGALNACT1-202ENST00000397998 CDAN1Q8IWY9 1227 aa11.69□□□□□ -0.54
CSGALNACT1-202ENST00000397998 FBXO36Q8NEA4 188 aa11.69□□□□□ -0.54
CSGALNACT1-202ENST00000397998 PARD3BQ8TEW8 1205 aa11.69□□□□□ -0.54
CSGALNACT1-202ENST00000397998 SHCBP1LQ9BZQ2 653 aa11.69□□□□□ -0.54
CSGALNACT1-202ENST00000397998 KIAA1586Q9HCI6 787 aa11.69□□□□□ -0.54
CSGALNACT1-202ENST00000397998 ARMCX1Q9P291 453 aa11.69□□□□□ -0.54
CSGALNACT1-202ENST00000397998 FSCN2O14926 492 aa11.69□□□□□ -0.54
CSGALNACT1-202ENST00000397998 CFLARO15519 480 aa11.69□□□□□ -0.54
CSGALNACT1-202ENST00000397998 PSAPP07602 524 aa11.69□□□□□ -0.54
CSGALNACT1-202ENST00000397998 RBP3P10745 1247 aa11.69□□□□□ -0.54
CSGALNACT1-202ENST00000397998 SERPINB3P29508 390 aa11.69□□□□□ -0.54
CSGALNACT1-202ENST00000397998 HOXD13P35453 343 aa11.69□□□□□ -0.54
CSGALNACT1-202ENST00000397998 NPTX2P47972 431 aa11.69□□□□□ -0.54
CSGALNACT1-202ENST00000397998 MAP7D1Q3KQU3 841 aa11.69□□□□□ -0.54
CSGALNACT1-202ENST00000397998 CYP4A22Q5TCH4 519 aa11.69□□□□□ -0.54
CSGALNACT1-202ENST00000397998 C1orf228Q6PIY5 440 aa11.69□□□□□ -0.54
CSGALNACT1-202ENST00000397998 FAM71AQ8IYT1 594 aa11.69□□□□□ -0.54
CSGALNACT1-202ENST00000397998 CYP4X1Q8N118 509 aa11.69□□□□□ -0.54
CSGALNACT1-202ENST00000397998 DEPDC1BQ8WUY9 529 aa11.69□□□□□ -0.54
CSGALNACT1-202ENST00000397998 ALKBH8Q96BT7 664 aaKnown RBP11.69□□□□□ -0.54
CSGALNACT1-202ENST00000397998 WWP1Q9H0M0 922 aa11.69□□□□□ -0.54
CSGALNACT1-202ENST00000397998 APOBEC2Q9Y235 224 aaKnown RBP11.69□□□□□ -0.54
CSGALNACT1-202ENST00000397998 MTO1Q9Y2Z2 717 aaKnown RBP11.69□□□□□ -0.54
CSGALNACT1-202ENST00000397998 PCDHA10Q9Y5I2 948 aa11.69□□□□□ -0.54
CSGALNACT1-202ENST00000397998 INO80B-WBP1J3KQ70 363 aa11.69□□□□□ -0.54
CSGALNACT1-202ENST00000397998 PSTPIP1O43586 416 aa11.69□□□□□ -0.54
CSGALNACT1-202ENST00000397998 PRPSAP2O60256 369 aa11.69□□□□□ -0.54
CSGALNACT1-202ENST00000397998 ADRB2P07550 413 aa11.69□□□□□ -0.54
CSGALNACT1-202ENST00000397998 KRT7P08729 469 aa11.69□□□□□ -0.54
CSGALNACT1-202ENST00000397998 TBXAS1P24557 533 aaPredicted RBP11.69□□□□□ -0.54
CSGALNACT1-202ENST00000397998 RANBP1P43487 201 aa11.69□□□□□ -0.54
CSGALNACT1-202ENST00000397998 PEX5P50542 639 aa11.69□□□□□ -0.54
CSGALNACT1-202ENST00000397998 ZNF200P98182 395 aaPredicted RBP11.69□□□□□ -0.54
CSGALNACT1-202ENST00000397998 CCDC14Q49A88 953 aa11.69□□□□□ -0.54
CSGALNACT1-202ENST00000397998 MFSD7Q6UXD7 560 aa11.69□□□□□ -0.54
CSGALNACT1-202ENST00000397998 FAM228AQ86W67 206 aa11.69□□□□□ -0.54
CSGALNACT1-202ENST00000397998 NLGN1Q8N2Q7 840 aa11.69□□□□□ -0.54
CSGALNACT1-202ENST00000397998 FAM71DQ8N9W8 422 aa11.69□□□□□ -0.54
CSGALNACT1-202ENST00000397998 TMEM143Q96AN5 459 aa11.69□□□□□ -0.54
CSGALNACT1-202ENST00000397998 CRAMP1Q96RY5 1269 aa11.69□□□□□ -0.54
CSGALNACT1-202ENST00000397998 INO80BQ9C086 356 aaPredicted RBP11.69□□□□□ -0.54
CSGALNACT1-202ENST00000397998 RAB6BQ9NRW1 208 aa11.69□□□□□ -0.54
CSGALNACT1-202ENST00000397998 VAV3Q9UKW4 847 aa11.69□□□□□ -0.54
CSGALNACT1-202ENST00000397998 PCDHAC2Q9Y5I4 1007 aa11.69□□□□□ -0.54
CSGALNACT1-202ENST00000397998 hCG_2014768A0A024R1R8 64 aa11.69□□□□□ -0.54
CSGALNACT1-202ENST00000397998 NOP56O00567 594 aaKnown RBP11.69□□□□□ -0.54
CSGALNACT1-202ENST00000397998 DNALI1O14645 258 aaPredicted RBP11.69□□□□□ -0.54
CSGALNACT1-202ENST00000397998 BANF1O75531 89 aa11.69□□□□□ -0.54
CSGALNACT1-202ENST00000397998 PSMD10O75832 226 aa11.69□□□□□ -0.54
CSGALNACT1-202ENST00000397998 KRT3P12035 628 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms