RNA–Protein interactions for RNA: ENST00000397906.6

TTC28-201, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TTC28, Length 11,795 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-201ENST00000397906 ZNF185O15231 689 aa11.9□□□□□ -0.5
TTC28-201ENST00000397906 CKBP12277 381 aa11.9□□□□□ -0.5
TTC28-201ENST00000397906 ESRRGP62508 458 aa11.9□□□□□ -0.5
TTC28-201ENST00000397906 CTXN3Q4LDR2 81 aa11.9□□□□□ -0.5
TTC28-201ENST00000397906 CACUL1Q86Y37 369 aa11.9□□□□□ -0.5
TTC28-201ENST00000397906 ASPSCR1Q9BZE9 553 aa11.9□□□□□ -0.5
TTC28-201ENST00000397906 EEF1DP29692 281 aaKnown RBP11.9□□□□□ -0.5
TTC28-201ENST00000397906 CYP2C19P33261 490 aa11.9□□□□□ -0.5
TTC28-201ENST00000397906 KLK7P49862 253 aa11.9□□□□□ -0.5
TTC28-201ENST00000397906 AARS2Q5JTZ9 985 aaKnown RBP11.9□□□□□ -0.5
TTC28-201ENST00000397906 PCSK9Q8NBP7 692 aaKnown RBP11.9□□□□□ -0.5
TTC28-201ENST00000397906 NAF1Q96HR8 494 aaKnown RBP11.9□□□□□ -0.5
TTC28-201ENST00000397906 MTA3Q9BTC8 594 aa11.9□□□□□ -0.5
TTC28-201ENST00000397906 ING2Q9H160 280 aa11.9□□□□□ -0.5
TTC28-201ENST00000397906 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.9□□□□□ -0.5
TTC28-201ENST00000397906 AMACRQ9UHK6 382 aa11.9□□□□□ -0.5
TTC28-201ENST00000397906 TRAF3IP3Q9Y228 551 aa11.9□□□□□ -0.5
TTC28-201ENST00000397906 ACADMP11310 421 aa11.9□□□□□ -0.5
TTC28-201ENST00000397906 CLCN6P51797 869 aa11.9□□□□□ -0.5
TTC28-201ENST00000397906 NUP93Q8N1F7 819 aa11.9□□□□□ -0.5
TTC28-201ENST00000397906 MAP10Q9P2G4 905 aa11.9□□□□□ -0.5
TTC28-201ENST00000397906 MAP3K6O95382 1288 aa11.9□□□□□ -0.5
TTC28-201ENST00000397906 MYL4P12829 197 aa11.9□□□□□ -0.5
TTC28-201ENST00000397906 AARSP49588 968 aaKnown RBP eCLIP11.9□□□□□ -0.5
TTC28-201ENST00000397906 LIMA1Q9UHB6 759 aaKnown RBP11.9□□□□□ -0.5
TTC28-201ENST00000397906 CNTNAP5Q8WYK1 1306 aa11.9□□□□□ -0.5
TTC28-201ENST00000397906 ATP1A1P05023 1023 aaKnown RBP11.9□□□□□ -0.5
TTC28-201ENST00000397906 RUSC1Q9BVN2 902 aa11.9□□□□□ -0.5
TTC28-201ENST00000397906 MAFGO15525 162 aa11.9□□□□□ -0.5
TTC28-201ENST00000397906 GGCXP38435 758 aa11.9□□□□□ -0.5
TTC28-201ENST00000397906 NR1H3Q13133 447 aa11.9□□□□□ -0.5
TTC28-201ENST00000397906 RCOR2Q8IZ40 523 aa11.9□□□□□ -0.5
TTC28-201ENST00000397906 RAD18Q9NS91 495 aa11.9□□□□□ -0.5
TTC28-201ENST00000397906 H7C4K7 107 aa11.9□□□□□ -0.51
TTC28-201ENST00000397906 AP1G2O75843 785 aa11.9□□□□□ -0.51
TTC28-201ENST00000397906 STILQ15468 1287 aa11.9□□□□□ -0.51
TTC28-201ENST00000397906 TMC7Q7Z402 723 aa11.9□□□□□ -0.51
TTC28-201ENST00000397906 FBXO32Q969P5 355 aa11.9□□□□□ -0.51
TTC28-201ENST00000397906 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.9□□□□□ -0.51
TTC28-201ENST00000397906 PCDHB12Q9Y5F1 795 aa11.9□□□□□ -0.51
TTC28-201ENST00000397906 CHRM3P20309 590 aa11.89□□□□□ -0.51
TTC28-201ENST00000397906 GCKP35557 465 aa11.89□□□□□ -0.51
TTC28-201ENST00000397906 TMEM132BQ14DG7 1078 aa11.89□□□□□ -0.51
TTC28-201ENST00000397906 TBX20Q9UMR3 447 aa11.89□□□□□ -0.51
TTC28-201ENST00000397906 GPR75-ASB3A0A0A6YYF3 556 aa11.89□□□□□ -0.51
TTC28-201ENST00000397906 M0QYT0 321 aa11.89□□□□□ -0.51
TTC28-201ENST00000397906 CYP2C8P10632 490 aa11.89□□□□□ -0.51
TTC28-201ENST00000397906 ACO1P21399 889 aaKnown RBP11.89□□□□□ -0.51
TTC28-201ENST00000397906 SOAT1P35610 550 aa11.89□□□□□ -0.51
TTC28-201ENST00000397906 EXOSC10Q01780 885 aaKnown RBP11.89□□□□□ -0.51
TTC28-201ENST00000397906 C1orf146Q5VVC0 180 aa11.89□□□□□ -0.51
TTC28-201ENST00000397906 ANGPTL2Q9UKU9 493 aa11.89□□□□□ -0.51
TTC28-201ENST00000397906 ASS1P00966 412 aaKnown RBP11.89□□□□□ -0.51
TTC28-201ENST00000397906 GPD1P21695 349 aa11.89□□□□□ -0.51
TTC28-201ENST00000397906 RFX3P48380 749 aa11.89□□□□□ -0.51
TTC28-201ENST00000397906 SETD4Q9NVD3 440 aa11.89□□□□□ -0.51
TTC28-201ENST00000397906 PDS5AQ29RF7 1337 aaKnown RBP11.89□□□□□ -0.51
TTC28-201ENST00000397906 LUC7L3O95232 432 aaKnown RBP11.89□□□□□ -0.51
TTC28-201ENST00000397906 KPNA1P52294 538 aaPredicted RBP11.89□□□□□ -0.51
TTC28-201ENST00000397906 USP10Q14694 798 aaKnown RBP11.89□□□□□ -0.51
TTC28-201ENST00000397906 GJB7Q6PEY0 223 aa11.89□□□□□ -0.51
TTC28-201ENST00000397906 SCFD1Q8WVM8 642 aa11.89□□□□□ -0.51
TTC28-201ENST00000397906 RPRD1AQ96P16 312 aaPredicted RBP11.89□□□□□ -0.51
TTC28-201ENST00000397906 PTPRMP28827 1452 aa11.89□□□□□ -0.51
TTC28-201ENST00000397906 MAP3K7CLP57077 242 aa11.89□□□□□ -0.51
TTC28-201ENST00000397906 MTF1Q14872 753 aa11.89□□□□□ -0.51
TTC28-201ENST00000397906 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.89□□□□□ -0.51
TTC28-201ENST00000397906 ACOT1Q86TX2 421 aa11.89□□□□□ -0.51
TTC28-201ENST00000397906 TBKBP1A7MCY6 615 aa11.89□□□□□ -0.51
TTC28-201ENST00000397906 SHCBP1Q8NEM2 672 aa11.89□□□□□ -0.51
TTC28-201ENST00000397906 TUBB6Q9BUF5 446 aa11.89□□□□□ -0.51
TTC28-201ENST00000397906 ZC3H13Q5T200 1668 aaKnown RBP11.89□□□□□ -0.51
TTC28-201ENST00000397906 ABCA9Q8IUA7 1624 aa11.89□□□□□ -0.51
TTC28-201ENST00000397906 C5orf58C9J3I9 102 aa11.89□□□□□ -0.51
TTC28-201ENST00000397906 POMCP01189 267 aa11.89□□□□□ -0.51
TTC28-201ENST00000397906 UCHL3P15374 230 aa11.89□□□□□ -0.51
TTC28-201ENST00000397906 OOSP2Q86WS3 158 aa11.89□□□□□ -0.51
TTC28-201ENST00000397906 FAM136AQ96C01 138 aa11.89□□□□□ -0.51
TTC28-201ENST00000397906 ARHGEF26Q96DR7 871 aa11.89□□□□□ -0.51
TTC28-201ENST00000397906 NRBF2Q96F24 287 aa11.89□□□□□ -0.51
TTC28-201ENST00000397906 TMEM60Q9H2L4 133 aa11.89□□□□□ -0.51
TTC28-201ENST00000397906 WDCPQ9H6R7 721 aa11.89□□□□□ -0.51
TTC28-201ENST00000397906 MZF1P28698 734 aaPredicted RBP11.89□□□□□ -0.51
TTC28-201ENST00000397906 PRKCQQ04759 706 aa11.89□□□□□ -0.51
TTC28-201ENST00000397906 B4GALNT2Q8NHY0 566 aa11.89□□□□□ -0.51
TTC28-201ENST00000397906 USP31Q70CQ4 1352 aa11.89□□□□□ -0.51
TTC28-201ENST00000397906 SPATA18Q8TC71 538 aa11.89□□□□□ -0.51
TTC28-201ENST00000397906 GPRASP2Q96D09 838 aa11.88□□□□□ -0.51
TTC28-201ENST00000397906 FBXL21Q9UKT6 434 aa11.88□□□□□ -0.51
TTC28-201ENST00000397906 CYB561D2O14569 222 aa11.88□□□□□ -0.51
TTC28-201ENST00000397906 CENPAP49450 140 aa11.88□□□□□ -0.51
TTC28-201ENST00000397906 PIGHQ14442 188 aaPredicted RBP11.88□□□□□ -0.51
TTC28-201ENST00000397906 NFKBIZQ9BYH8 718 aa11.88□□□□□ -0.51
TTC28-201ENST00000397906 DDIT4Q9NX09 232 aa11.88□□□□□ -0.51
TTC28-201ENST00000397906 BRAFP15056 766 aa11.88□□□□□ -0.51
TTC28-201ENST00000397906 AVPR1AP37288 418 aa11.88□□□□□ -0.51
TTC28-201ENST00000397906 ACADSBP45954 432 aa11.88□□□□□ -0.51
TTC28-201ENST00000397906 EMBQ6PCB8 327 aa11.88□□□□□ -0.51
TTC28-201ENST00000397906 OTUB1Q96FW1 271 aaPredicted RBP11.88□□□□□ -0.51
TTC28-201ENST00000397906 TASP1Q9H6P5 420 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms