RNA–Protein interactions for RNA: ENST00000397477.2

CPSF1P1-201, Transcript of cleavage and polyadenylation specific factor 1 pseudogene 1, humanhuman

BASIC

Gene CPSF1P1, Length 3,730 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1P1-201ENST00000397477 ANKRD31Q8N7Z5 1873 aa11.06□□□□□ -0.64
CPSF1P1-201ENST00000397477 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.06□□□□□ -0.64
CPSF1P1-201ENST00000397477 NSRP1Q9H0G5 558 aaKnown RBP11.06□□□□□ -0.64
CPSF1P1-201ENST00000397477 PDGFCQ9NRA1 345 aa11.06□□□□□ -0.64
CPSF1P1-201ENST00000397477 FGFR1OP2Q9NVK5 253 aa11.06□□□□□ -0.64
CPSF1P1-201ENST00000397477 GRHL1Q9NZI5 618 aa11.06□□□□□ -0.64
CPSF1P1-201ENST00000397477 MROH7Q68CQ1 1323 aa11.05□□□□□ -0.64
CPSF1P1-201ENST00000397477 RASA4BC9J798 803 aa11.05□□□□□ -0.64
CPSF1P1-201ENST00000397477 ATP2A1O14983 1001 aa11.05□□□□□ -0.64
CPSF1P1-201ENST00000397477 RASA4O43374 803 aa11.05□□□□□ -0.64
CPSF1P1-201ENST00000397477 RPS6KA5O75582 802 aa11.05□□□□□ -0.64
CPSF1P1-201ENST00000397477 PROSCO94903 275 aa11.05□□□□□ -0.64
CPSF1P1-201ENST00000397477 VNN1O95497 513 aa11.05□□□□□ -0.64
CPSF1P1-201ENST00000397477 PTGIRP43119 386 aa11.05□□□□□ -0.64
CPSF1P1-201ENST00000397477 NFX1Q12986 1120 aaKnown RBP11.05□□□□□ -0.64
CPSF1P1-201ENST00000397477 AGBL2Q5U5Z8 902 aa11.05□□□□□ -0.64
CPSF1P1-201ENST00000397477 BSPRYQ5W0U4 402 aa11.05□□□□□ -0.64
CPSF1P1-201ENST00000397477 KCTD6Q8NC69 237 aa11.05□□□□□ -0.64
CPSF1P1-201ENST00000397477 RDM1Q8NG50 284 aa11.05□□□□□ -0.64
CPSF1P1-201ENST00000397477 TBC1D31Q96DN5 1066 aa11.05□□□□□ -0.64
CPSF1P1-201ENST00000397477 SENP7Q9BQF6 1050 aa11.05□□□□□ -0.64
CPSF1P1-201ENST00000397477 SYT11Q9BT88 431 aa11.05□□□□□ -0.64
CPSF1P1-201ENST00000397477 NGRNQ9NPE2 291 aaKnown RBP11.05□□□□□ -0.64
CPSF1P1-201ENST00000397477 MAP3K20Q9NYL2 800 aaKnown RBP11.05□□□□□ -0.64
CPSF1P1-201ENST00000397477 ARHGAP28Q9P2N2 729 aa11.05□□□□□ -0.64
CPSF1P1-201ENST00000397477 DNPEPQ9ULA0 475 aa11.05□□□□□ -0.64
CPSF1P1-201ENST00000397477 SCINQ9Y6U3 715 aa11.05□□□□□ -0.64
CPSF1P1-201ENST00000397477 PPFIA2O75334 1257 aa11.05□□□□□ -0.64
CPSF1P1-201ENST00000397477 CYP2C8P10632 490 aa11.05□□□□□ -0.64
CPSF1P1-201ENST00000397477 YARSP54577 528 aaKnown RBP11.05□□□□□ -0.64
CPSF1P1-201ENST00000397477 MAMLD1Q13495 774 aa11.05□□□□□ -0.64
CPSF1P1-201ENST00000397477 AMHR2Q16671 573 aa11.05□□□□□ -0.64
CPSF1P1-201ENST00000397477 EEF1DP3Q658K8 133 aa11.05□□□□□ -0.64
CPSF1P1-201ENST00000397477 XRRA1Q6P2D8 792 aa11.05□□□□□ -0.64
CPSF1P1-201ENST00000397477 TBC1D1Q86TI0 1168 aaPredicted RBP11.05□□□□□ -0.64
CPSF1P1-201ENST00000397477 SLC16A10Q8TF71 515 aa11.05□□□□□ -0.64
CPSF1P1-201ENST00000397477 HVCN1Q96D96 273 aa11.05□□□□□ -0.64
CPSF1P1-201ENST00000397477 FHDC1Q9C0D6 1143 aaPredicted RBP11.05□□□□□ -0.64
CPSF1P1-201ENST00000397477 H0YGN5 161 aa11.05□□□□□ -0.64
CPSF1P1-201ENST00000397477 M0QYV0 167 aa11.05□□□□□ -0.64
CPSF1P1-201ENST00000397477 TULP2O00295 520 aa11.05□□□□□ -0.64
CPSF1P1-201ENST00000397477 ITGB3P05106 788 aa11.05□□□□□ -0.64
CPSF1P1-201ENST00000397477 KRT3P12035 628 aa11.05□□□□□ -0.64
CPSF1P1-201ENST00000397477 TBXAS1P24557 533 aaPredicted RBP11.05□□□□□ -0.64
CPSF1P1-201ENST00000397477 ATF7IP2Q5U623 682 aa11.05□□□□□ -0.64
CPSF1P1-201ENST00000397477 HIBCHQ6NVY1 386 aaPredicted RBP11.05□□□□□ -0.64
CPSF1P1-201ENST00000397477 CD302Q8IX05 232 aa11.05□□□□□ -0.64
CPSF1P1-201ENST00000397477 CTAGE3PQ8IX95 158 aa11.05□□□□□ -0.64
CPSF1P1-201ENST00000397477 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.05□□□□□ -0.64
CPSF1P1-201ENST00000397477 GPATCH11Q8N954 259 aa11.05□□□□□ -0.64
CPSF1P1-201ENST00000397477 MMP19Q99542 508 aa11.05□□□□□ -0.64
CPSF1P1-201ENST00000397477 DCLK3Q9C098 648 aa11.05□□□□□ -0.64
CPSF1P1-201ENST00000397477 HAPLN2Q9GZV7 340 aa11.05□□□□□ -0.64
CPSF1P1-201ENST00000397477 HAUS2Q9NVX0 235 aa11.05□□□□□ -0.64
CPSF1P1-201ENST00000397477 TJP2Q9UDY2 1190 aa11.05□□□□□ -0.64
CPSF1P1-201ENST00000397477 KCNG1Q9UIX4 513 aa11.05□□□□□ -0.64
CPSF1P1-201ENST00000397477 HEY1Q9Y5J3 304 aa11.05□□□□□ -0.64
CPSF1P1-201ENST00000397477 NFS1Q9Y697 457 aa11.05□□□□□ -0.64
CPSF1P1-201ENST00000397477 ADCY3O60266 1144 aa11.04□□□□□ -0.64
CPSF1P1-201ENST00000397477 C4BPAP04003 597 aaKnown RBP11.04□□□□□ -0.64
CPSF1P1-201ENST00000397477 SNRPFP62306 86 aaKnown RBP11.04□□□□□ -0.64
CPSF1P1-201ENST00000397477 PDIA2Q13087 525 aaKnown RBP11.04□□□□□ -0.64
CPSF1P1-201ENST00000397477 PPP6R3Q5H9R7 873 aaPredicted RBP11.04□□□□□ -0.64
CPSF1P1-201ENST00000397477 MORC4Q8TE76 937 aa11.04□□□□□ -0.64
CPSF1P1-201ENST00000397477 FAM81BQ96LP2 452 aa11.04□□□□□ -0.64
CPSF1P1-201ENST00000397477 CGRRF1Q99675 332 aa11.04□□□□□ -0.64
CPSF1P1-201ENST00000397477 MIS12Q9H081 205 aa11.04□□□□□ -0.64
CPSF1P1-201ENST00000397477 CNOT10Q9H9A5 744 aaKnown RBP11.04□□□□□ -0.64
CPSF1P1-201ENST00000397477 EFCC1Q9HA90 598 aa11.04□□□□□ -0.64
CPSF1P1-201ENST00000397477 ZDHHC18Q9NUE0 388 aa11.04□□□□□ -0.64
CPSF1P1-201ENST00000397477 IKBKGQ9Y6K9 419 aa11.04□□□□□ -0.64
CPSF1P1-201ENST00000397477 H7C0C1 242 aa11.04□□□□□ -0.64
CPSF1P1-201ENST00000397477 RNF8O76064 485 aa11.04□□□□□ -0.64
CPSF1P1-201ENST00000397477 RARGP13631 454 aa11.04□□□□□ -0.64
CPSF1P1-201ENST00000397477 ATP5OP48047 213 aa11.04□□□□□ -0.64
CPSF1P1-201ENST00000397477 IREB2P48200 963 aaKnown RBP11.04□□□□□ -0.64
CPSF1P1-201ENST00000397477 ZNF280AP59817 542 aaPredicted RBP11.04□□□□□ -0.64
CPSF1P1-201ENST00000397477 GRM1Q13255 1194 aa11.04□□□□□ -0.64
CPSF1P1-201ENST00000397477 TXNRD3NBQ6F5E7 133 aa11.04□□□□□ -0.64
CPSF1P1-201ENST00000397477 TMEM192Q8IY95 271 aa11.04□□□□□ -0.64
CPSF1P1-201ENST00000397477 FAM49BQ9NUQ9 324 aa11.04□□□□□ -0.64
CPSF1P1-201ENST00000397477 GPRC5DQ9NZD1 345 aa11.04□□□□□ -0.64
CPSF1P1-201ENST00000397477 TOM1L1O75674 476 aa11.04□□□□□ -0.64
CPSF1P1-201ENST00000397477 TJP3O95049 919 aa11.04□□□□□ -0.64
CPSF1P1-201ENST00000397477 EDN1P05305 212 aa11.04□□□□□ -0.64
CPSF1P1-201ENST00000397477 ZNF286BP0CG31 522 aa11.04□□□□□ -0.64
CPSF1P1-201ENST00000397477 FNTAP49354 379 aa11.04□□□□□ -0.64
CPSF1P1-201ENST00000397477 GLRA4Q5JXX5 417 aa11.04□□□□□ -0.64
CPSF1P1-201ENST00000397477 FAM102AQ5T9C2 384 aaPredicted RBP11.04□□□□□ -0.64
CPSF1P1-201ENST00000397477 C1orf228Q6PIY5 440 aa11.04□□□□□ -0.64
CPSF1P1-201ENST00000397477 PALM2Q8IXS6 379 aa11.04□□□□□ -0.64
CPSF1P1-201ENST00000397477 DDX1Q92499 740 aaKnown RBP11.04□□□□□ -0.64
CPSF1P1-201ENST00000397477 TRIM6Q9C030 488 aaPredicted RBP11.04□□□□□ -0.64
CPSF1P1-201ENST00000397477 NIF3L1Q9GZT8 377 aa11.04□□□□□ -0.64
CPSF1P1-201ENST00000397477 ASCC2Q9H1I8 757 aaPredicted RBP11.04□□□□□ -0.64
CPSF1P1-201ENST00000397477 IP6K2Q9UHH9 426 aa11.04□□□□□ -0.64
CPSF1P1-201ENST00000397477 NENFQ9UMX5 172 aa11.04□□□□□ -0.64
CPSF1P1-201ENST00000397477 AGAP1Q9UPQ3 857 aa11.04□□□□□ -0.64
CPSF1P1-201ENST00000397477 NEU2Q9Y3R4 380 aa11.04□□□□□ -0.64
CPSF1P1-201ENST00000397477 TRAPPC3O43617 180 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms