RNA–Protein interactions for RNA: ENST00000397417.6

IFT140-202, Transcript of intraflagellar transport 140, humanhuman

TSL 5

Gene IFT140, Length 4,023 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-202ENST00000397417 ACVR2BQ13705 512 aa11.77□□□□□ -0.53
IFT140-202ENST00000397417 BEND6Q5SZJ8 279 aaPredicted RBP11.77□□□□□ -0.53
IFT140-202ENST00000397417 BSNDQ8WZ55 320 aa11.77□□□□□ -0.53
IFT140-202ENST00000397417 KRT35Q92764 455 aa11.77□□□□□ -0.53
IFT140-202ENST00000397417 LPPQ93052 612 aa11.77□□□□□ -0.53
IFT140-202ENST00000397417 MCUR1Q96AQ8 359 aa11.77□□□□□ -0.53
IFT140-202ENST00000397417 PABPC5Q96DU9 382 aaKnown RBP11.77□□□□□ -0.53
IFT140-202ENST00000397417 EDEM3Q9BZQ6 932 aa11.77□□□□□ -0.53
IFT140-202ENST00000397417 GOLGA2P5Q9HBQ8 144 aa11.77□□□□□ -0.53
IFT140-202ENST00000397417 TRPC7Q9HCX4 862 aa11.77□□□□□ -0.53
IFT140-202ENST00000397417 IP6K2Q9UHH9 426 aa11.77□□□□□ -0.53
IFT140-202ENST00000397417 GRID2IPA4D2P6 1211 aa11.76□□□□□ -0.53
IFT140-202ENST00000397417 CXCL11O14625 94 aa11.76□□□□□ -0.53
IFT140-202ENST00000397417 SPTLC1O15269 473 aa11.76□□□□□ -0.53
IFT140-202ENST00000397417 NCAM1P13591 858 aa11.76□□□□□ -0.53
IFT140-202ENST00000397417 PMS2P54278 862 aa11.76□□□□□ -0.53
IFT140-202ENST00000397417 EMBQ6PCB8 327 aa11.76□□□□□ -0.53
IFT140-202ENST00000397417 NOP9Q86U38 636 aaKnown RBP11.76□□□□□ -0.53
IFT140-202ENST00000397417 SCUBE3Q8IX30 993 aa11.76□□□□□ -0.53
IFT140-202ENST00000397417 SPATA18Q8TC71 538 aa11.76□□□□□ -0.53
IFT140-202ENST00000397417 VPS11Q9H270 941 aa11.76□□□□□ -0.53
IFT140-202ENST00000397417 ANKZF1Q9H8Y5 726 aa11.76□□□□□ -0.53
IFT140-202ENST00000397417 PHRF1Q9P1Y6 1649 aaKnown RBP11.76□□□□□ -0.53
IFT140-202ENST00000397417 FANCGO15287 622 aa11.76□□□□□ -0.53
IFT140-202ENST00000397417 EPHB1P54762 984 aa11.76□□□□□ -0.53
IFT140-202ENST00000397417 PCSK7Q16549 785 aa11.76□□□□□ -0.53
IFT140-202ENST00000397417 NOTUMQ6P988 496 aa11.76□□□□□ -0.53
IFT140-202ENST00000397417 MPZL3Q6UWV2 235 aa11.76□□□□□ -0.53
IFT140-202ENST00000397417 PDZD4Q76G19 769 aaPredicted RBP11.76□□□□□ -0.53
IFT140-202ENST00000397417 VPS52Q8N1B4 723 aa11.76□□□□□ -0.53
IFT140-202ENST00000397417 FAM71DQ8N9W8 422 aa11.76□□□□□ -0.53
IFT140-202ENST00000397417 GIMAP7Q8NHV1 300 aa11.76□□□□□ -0.53
IFT140-202ENST00000397417 PPP4R1Q8TF05 950 aa11.76□□□□□ -0.53
IFT140-202ENST00000397417 ALKBH8Q96BT7 664 aaKnown RBP11.76□□□□□ -0.53
IFT140-202ENST00000397417 RBM41Q96IZ5 413 aaKnown RBP11.76□□□□□ -0.53
IFT140-202ENST00000397417 GAD1Q99259 594 aa11.76□□□□□ -0.53
IFT140-202ENST00000397417 RNPEPQ9H4A4 650 aa11.76□□□□□ -0.53
IFT140-202ENST00000397417 SARS2Q9NP81 518 aaKnown RBP11.76□□□□□ -0.53
IFT140-202ENST00000397417 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.76□□□□□ -0.53
IFT140-202ENST00000397417 VAV3Q9UKW4 847 aa11.76□□□□□ -0.53
IFT140-202ENST00000397417 VGLL3A8MV65 326 aa11.76□□□□□ -0.53
IFT140-202ENST00000397417 H3BQF6 201 aa11.76□□□□□ -0.53
IFT140-202ENST00000397417 PDE2AO00408 941 aaPredicted RBP11.76□□□□□ -0.53
IFT140-202ENST00000397417 GIPC1O14908 333 aa11.76□□□□□ -0.53
IFT140-202ENST00000397417 STAMBPO95630 424 aa11.76□□□□□ -0.53
IFT140-202ENST00000397417 MARCKSL1P49006 195 aa11.76□□□□□ -0.53
IFT140-202ENST00000397417 SULT1E1P49888 294 aa11.76□□□□□ -0.53
IFT140-202ENST00000397417 SEC24CP53992 1094 aa11.76□□□□□ -0.53
IFT140-202ENST00000397417 BTBD8Q5XKL5 378 aa11.76□□□□□ -0.53
IFT140-202ENST00000397417 HEATR6Q6AI08 1181 aaKnown RBP11.76□□□□□ -0.53
IFT140-202ENST00000397417 THEM5Q8N1Q8 247 aa11.76□□□□□ -0.53
IFT140-202ENST00000397417 ATP2A3Q93084 1043 aa11.76□□□□□ -0.53
IFT140-202ENST00000397417 CACNG4Q9UBN1 327 aa11.76□□□□□ -0.53
IFT140-202ENST00000397417 CHMP2BQ9UQN3 213 aa11.76□□□□□ -0.53
IFT140-202ENST00000397417 TELO2Q9Y4R8 837 aa11.76□□□□□ -0.53
IFT140-202ENST00000397417 FRMPD4Q14CM0 1322 aa11.76□□□□□ -0.53
IFT140-202ENST00000397417 C17orf102A2RUQ5 167 aa11.76□□□□□ -0.53
IFT140-202ENST00000397417 GLI1P08151 1106 aa11.76□□□□□ -0.53
IFT140-202ENST00000397417 C6orf163Q5TEZ5 329 aa11.76□□□□□ -0.53
IFT140-202ENST00000397417 CENPUQ71F23 418 aa11.76□□□□□ -0.53
IFT140-202ENST00000397417 JAMLQ86YT9 394 aa11.76□□□□□ -0.53
IFT140-202ENST00000397417 MDM1Q8TC05 714 aa11.76□□□□□ -0.53
IFT140-202ENST00000397417 ZNF606Q8WXB4 792 aa11.76□□□□□ -0.53
IFT140-202ENST00000397417 TRAF3IP3Q9Y228 551 aa11.76□□□□□ -0.53
IFT140-202ENST00000397417 LACTBL1A8MY62 500 aa11.75□□□□□ -0.53
IFT140-202ENST00000397417 BTBD19C9JJ37 291 aa11.75□□□□□ -0.53
IFT140-202ENST00000397417 CAPSQ13938 189 aa11.75□□□□□ -0.53
IFT140-202ENST00000397417 CCNI2Q6ZMN8 369 aaPredicted RBP11.75□□□□□ -0.53
IFT140-202ENST00000397417 PALB2Q86YC2 1186 aa11.75□□□□□ -0.53
IFT140-202ENST00000397417 TMEM161BQ8NDZ6 487 aa11.75□□□□□ -0.53
IFT140-202ENST00000397417 HIPK4Q8NE63 616 aa11.75□□□□□ -0.53
IFT140-202ENST00000397417 OR6P1Q8NGX9 317 aa11.75□□□□□ -0.53
IFT140-202ENST00000397417 CCT6BQ92526 530 aa11.75□□□□□ -0.53
IFT140-202ENST00000397417 RUNDC3BQ96NL0 473 aa11.75□□□□□ -0.53
IFT140-202ENST00000397417 MRIQ9BWK5 157 aa11.75□□□□□ -0.53
IFT140-202ENST00000397417 UBP1Q9NZI7 540 aa11.75□□□□□ -0.53
IFT140-202ENST00000397417 KLHL14Q9P2G3 628 aa11.75□□□□□ -0.53
IFT140-202ENST00000397417 INTUQ9ULD6 942 aa11.75□□□□□ -0.53
IFT140-202ENST00000397417 STRIP2Q9ULQ0 834 aa11.75□□□□□ -0.53
IFT140-202ENST00000397417 SIK3Q9Y2K2 1263 aa11.75□□□□□ -0.53
IFT140-202ENST00000397417 UBIAD1Q9Y5Z9 338 aa11.75□□□□□ -0.53
IFT140-202ENST00000397417 XIRP1Q702N8 1843 aaKnown RBP11.75□□□□□ -0.53
IFT140-202ENST00000397417 A0A0G2JND7 137 aa11.75□□□□□ -0.53
IFT140-202ENST00000397417 ARHGAP42A6NI28 874 aa11.75□□□□□ -0.53
IFT140-202ENST00000397417 ADCY3O60266 1144 aa11.75□□□□□ -0.53
IFT140-202ENST00000397417 ONECUT3O60422 494 aaPredicted RBP11.75□□□□□ -0.53
IFT140-202ENST00000397417 BRAFP15056 766 aa11.75□□□□□ -0.53
IFT140-202ENST00000397417 ZNF200P98182 395 aaPredicted RBP11.75□□□□□ -0.53
IFT140-202ENST00000397417 CDR2Q01850 454 aa11.75□□□□□ -0.53
IFT140-202ENST00000397417 LMNB2Q03252 620 aa11.75□□□□□ -0.53
IFT140-202ENST00000397417 MAP7D1Q3KQU3 841 aa11.75□□□□□ -0.53
IFT140-202ENST00000397417 FBXO25Q8TCJ0 367 aa11.75□□□□□ -0.53
IFT140-202ENST00000397417 WHAMMQ8TF30 809 aa11.75□□□□□ -0.53
IFT140-202ENST00000397417 LRRC15Q8TF66 581 aa11.75□□□□□ -0.53
IFT140-202ENST00000397417 HNRNPLLQ8WVV9 542 aaKnown RBP11.75□□□□□ -0.53
IFT140-202ENST00000397417 FAM81BQ96LP2 452 aa11.75□□□□□ -0.53
IFT140-202ENST00000397417 ZNF512Q96ME7 567 aaPredicted RBP11.75□□□□□ -0.53
IFT140-202ENST00000397417 TMEM121Q9BTD3 319 aa11.75□□□□□ -0.53
IFT140-202ENST00000397417 TMEM253P0C7T8 217 aa11.75□□□□□ -0.53
IFT140-202ENST00000397417 ETFBP38117 255 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms