RNA–Protein interactions for RNA: ENST00000397408.5

TSPAN4-206, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-206ENST00000397408 APOL5Q9BWW9 433 aa22.81■■□□□ 1.24
TSPAN4-206ENST00000397408 MAN1C1Q9NR34 630 aa22.81■■□□□ 1.24
TSPAN4-206ENST00000397408 DSEQ9UL01 958 aa22.81■■□□□ 1.24
TSPAN4-206ENST00000397408 TBC1D4O60343 1298 aa22.8■■□□□ 1.24
TSPAN4-206ENST00000397408 OAZ2O95190 189 aa22.8■■□□□ 1.24
TSPAN4-206ENST00000397408 CYP11A1P05108 521 aa22.8■■□□□ 1.24
TSPAN4-206ENST00000397408 SPATA31D3P0C874 917 aa22.8■■□□□ 1.24
TSPAN4-206ENST00000397408 ARPP19P56211 112 aa22.8■■□□□ 1.24
TSPAN4-206ENST00000397408 TRPC3Q13507 836 aa22.8■■□□□ 1.24
TSPAN4-206ENST00000397408 RAB33AQ14088 237 aa22.8■■□□□ 1.24
TSPAN4-206ENST00000397408 SLC8B1Q6J4K2 584 aa22.8■■□□□ 1.24
TSPAN4-206ENST00000397408 SPATA31D4Q6ZUB0 917 aa22.8■■□□□ 1.24
TSPAN4-206ENST00000397408 SMRP1Q8NCR6 262 aa22.8■■□□□ 1.24
TSPAN4-206ENST00000397408 SNX9Q9Y5X1 595 aa22.8■■□□□ 1.24
TSPAN4-206ENST00000397408 IKBKBO14920 756 aa22.79■■□□□ 1.24
TSPAN4-206ENST00000397408 CST3P01034 146 aaPredicted RBP22.79■■□□□ 1.24
TSPAN4-206ENST00000397408 C4BPAP04003 597 aaKnown RBP22.79■■□□□ 1.24
TSPAN4-206ENST00000397408 HOXB8P17481 243 aaPredicted RBP22.79■■□□□ 1.24
TSPAN4-206ENST00000397408 ROR1Q01973 937 aa22.79■■□□□ 1.24
TSPAN4-206ENST00000397408 ENPEPQ07075 957 aa22.79■■□□□ 1.24
TSPAN4-206ENST00000397408 SMAD4Q13485 552 aaKnown RBP22.79■■□□□ 1.24
TSPAN4-206ENST00000397408 WSCD1Q658N2 575 aa22.79■■□□□ 1.24
TSPAN4-206ENST00000397408 PTCRAQ6ISU1 281 aaPredicted RBP22.79■■□□□ 1.24
TSPAN4-206ENST00000397408 LILRA6Q6PI73 481 aa22.79■■□□□ 1.24
TSPAN4-206ENST00000397408 FOXR2Q6PJQ5 311 aa22.79■■□□□ 1.24
TSPAN4-206ENST00000397408 METTL23Q86XA0 190 aa22.79■■□□□ 1.24
TSPAN4-206ENST00000397408 MLKLQ8NB16 471 aa22.79■■□□□ 1.24
TSPAN4-206ENST00000397408 CEP63Q96MT8 703 aa22.79■■□□□ 1.24
TSPAN4-206ENST00000397408 FBXW11Q9UKB1 542 aa22.79■■□□□ 1.24
TSPAN4-206ENST00000397408 C1RP00736 705 aa22.78■■□□□ 1.24
TSPAN4-206ENST00000397408 MYL6P60660 151 aa22.78■■□□□ 1.24
TSPAN4-206ENST00000397408 DPCR1Q3MIW9 517 aa22.78■■□□□ 1.24
TSPAN4-206ENST00000397408 ZACNQ401N2 412 aa22.78■■□□□ 1.24
TSPAN4-206ENST00000397408 ELMSAN1Q6PJG2 1045 aa22.78■■□□□ 1.24
TSPAN4-206ENST00000397408 C12orf76Q8N812 135 aaPredicted RBP22.78■■□□□ 1.24
TSPAN4-206ENST00000397408 KREMEN2Q8NCW0 462 aa22.78■■□□□ 1.24
TSPAN4-206ENST00000397408 MMRN2Q9H8L6 949 aa22.78■■□□□ 1.24
TSPAN4-206ENST00000397408 SFXN1Q9H9B4 322 aa22.78■■□□□ 1.24
TSPAN4-206ENST00000397408 GDAP2Q9NXN4 497 aa22.78■■□□□ 1.24
TSPAN4-206ENST00000397408 DPP7Q9UHL4 492 aa22.78■■□□□ 1.24
TSPAN4-206ENST00000397408 L1RE1Q9UN81 338 aa22.78■■□□□ 1.24
TSPAN4-206ENST00000397408 WDR27A2RRH5 827 aa22.77■■□□□ 1.24
TSPAN4-206ENST00000397408 MBTPS2O43462 519 aa22.77■■□□□ 1.24
TSPAN4-206ENST00000397408 HUS1O60921 280 aa22.77■■□□□ 1.24
TSPAN4-206ENST00000397408 CLSTN1O94985 981 aa22.77■■□□□ 1.24
TSPAN4-206ENST00000397408 GCLMP48507 274 aa22.77■■□□□ 1.24
TSPAN4-206ENST00000397408 NLRP12P59046 1061 aa22.77■■□□□ 1.24
TSPAN4-206ENST00000397408 PPP3CAQ08209 521 aa22.77■■□□□ 1.24
TSPAN4-206ENST00000397408 NCOA4Q13772 614 aa22.77■■□□□ 1.24
TSPAN4-206ENST00000397408 PUS10Q3MIT2 529 aaKnown RBP22.77■■□□□ 1.24
TSPAN4-206ENST00000397408 DCAF17Q5H9S7 520 aaPredicted RBP22.77■■□□□ 1.24
TSPAN4-206ENST00000397408 RARS2Q5T160 578 aaKnown RBP22.77■■□□□ 1.24
TSPAN4-206ENST00000397408 CCDC183Q5T5S1 534 aa22.77■■□□□ 1.24
TSPAN4-206ENST00000397408 RBM43Q6ZSC3 357 aaKnown RBP22.77■■□□□ 1.24
TSPAN4-206ENST00000397408 SV2AQ7L0J3 742 aa22.77■■□□□ 1.24
TSPAN4-206ENST00000397408 PDCL2Q8N4E4 241 aa22.77■■□□□ 1.24
TSPAN4-206ENST00000397408 PLEKHA4Q9H4M7 779 aa22.77■■□□□ 1.24
TSPAN4-206ENST00000397408 RWDD2AQ9UIY3 292 aa22.77■■□□□ 1.24
TSPAN4-206ENST00000397408 GRXCR2A6NFK2 248 aa22.76■■□□□ 1.23
TSPAN4-206ENST00000397408 OR6C75A6NL08 312 aa22.76■■□□□ 1.23
TSPAN4-206ENST00000397408 VNN1O95497 513 aa22.76■■□□□ 1.23
TSPAN4-206ENST00000397408 CPB1P15086 417 aa22.76■■□□□ 1.23
TSPAN4-206ENST00000397408 TJAP1Q5JTD0 557 aa22.76■■□□□ 1.23
TSPAN4-206ENST00000397408 LIN9Q5TKA1 542 aa22.76■■□□□ 1.23
TSPAN4-206ENST00000397408 C15orf39Q6ZRI6 1047 aa22.76■■□□□ 1.23
TSPAN4-206ENST00000397408 TOP6BLQ8N6T0 577 aa22.76■■□□□ 1.23
TSPAN4-206ENST00000397408 SYAP1Q96A49 352 aaPredicted RBP22.76■■□□□ 1.23
TSPAN4-206ENST00000397408 OXCT2Q9BYC2 517 aaPredicted RBP22.76■■□□□ 1.23
TSPAN4-206ENST00000397408 S1PR5Q9H228 398 aa22.76■■□□□ 1.23
TSPAN4-206ENST00000397408 ARMCX3Q9UH62 379 aaPredicted RBP22.76■■□□□ 1.23
TSPAN4-206ENST00000397408 USP15Q9Y4E8 981 aaPredicted RBP22.76■■□□□ 1.23
TSPAN4-206ENST00000397408 MTCL1Q9Y4B5 1905 aaKnown RBP22.76■■□□□ 1.23
TSPAN4-206ENST00000397408 OR4Q2P0C623 313 aa22.75■■□□□ 1.23
TSPAN4-206ENST00000397408 IL9P15248 144 aa22.75■■□□□ 1.23
TSPAN4-206ENST00000397408 ATICP31939 592 aa22.75■■□□□ 1.23
TSPAN4-206ENST00000397408 PIK3CAP42336 1068 aa22.75■■□□□ 1.23
TSPAN4-206ENST00000397408 ZNF699Q32M78 642 aa22.75■■□□□ 1.23
TSPAN4-206ENST00000397408 CCDC40Q4G0X9 1142 aa22.75■■□□□ 1.23
TSPAN4-206ENST00000397408 TCERG1LQ5VWI1 586 aa22.75■■□□□ 1.23
TSPAN4-206ENST00000397408 TMC5Q6UXY8 1006 aa22.75■■□□□ 1.23
TSPAN4-206ENST00000397408 FILIP1Q7Z7B0 1213 aa22.75■■□□□ 1.23
TSPAN4-206ENST00000397408 ADGRF2Q8IZF7 708 aa22.75■■□□□ 1.23
TSPAN4-206ENST00000397408 OR10T2Q8NGX3 314 aa22.75■■□□□ 1.23
TSPAN4-206ENST00000397408 HDAC7Q8WUI4 952 aa22.75■■□□□ 1.23
TSPAN4-206ENST00000397408 RTP3Q9BQQ7 232 aa22.75■■□□□ 1.23
TSPAN4-206ENST00000397408 XYLT2Q9H1B5 865 aa22.75■■□□□ 1.23
TSPAN4-206ENST00000397408 TMEM8AQ9HCN3 771 aa22.75■■□□□ 1.23
TSPAN4-206ENST00000397408 A0A0C4DFX4 3053 aa22.75■■□□□ 1.23
TSPAN4-206ENST00000397408 RFPL2O75678 378 aa22.74■■□□□ 1.23
TSPAN4-206ENST00000397408 STAU1O95793 577 aaKnown RBP22.74■■□□□ 1.23
TSPAN4-206ENST00000397408 BMP1P13497 986 aa22.74■■□□□ 1.23
TSPAN4-206ENST00000397408 MCCD1P59942 119 aaPredicted RBP22.74■■□□□ 1.23
TSPAN4-206ENST00000397408 TNNC1P63316 161 aa22.74■■□□□ 1.23
TSPAN4-206ENST00000397408 ITIH3Q06033 890 aa22.74■■□□□ 1.23
TSPAN4-206ENST00000397408 SOWAHAQ2M3V2 549 aa22.74■■□□□ 1.23
TSPAN4-206ENST00000397408 THEM5Q8N1Q8 247 aa22.74■■□□□ 1.23
TSPAN4-206ENST00000397408 TMEM86AQ8N2M4 240 aa22.74■■□□□ 1.23
TSPAN4-206ENST00000397408 ZNF461Q8TAF7 563 aa22.74■■□□□ 1.23
TSPAN4-206ENST00000397408 FEZF2Q8TBJ5 459 aa22.74■■□□□ 1.23
TSPAN4-206ENST00000397408 TMEM209Q96SK2 561 aa22.74■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms