RNA–Protein interactions for RNA: ENST00000397204.8

CAPN3-208, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-208ENST00000397204 TTC38Q5R3I4 469 aa9.57□□□□□ -0.88
CAPN3-208ENST00000397204 TSSK4Q6SA08 328 aa9.57□□□□□ -0.88
CAPN3-208ENST00000397204 PDZD4Q76G19 769 aaPredicted RBP9.57□□□□□ -0.88
CAPN3-208ENST00000397204 MFSD6LQ8IWD5 586 aa9.57□□□□□ -0.88
CAPN3-208ENST00000397204 CEP120Q8N960 986 aa9.57□□□□□ -0.88
CAPN3-208ENST00000397204 IGSF22Q8N9C0 903 aa9.57□□□□□ -0.88
CAPN3-208ENST00000397204 FBXO18Q8NFZ0 1043 aa9.57□□□□□ -0.88
CAPN3-208ENST00000397204 DEPDC1BQ8WUY9 529 aa9.57□□□□□ -0.88
CAPN3-208ENST00000397204 FAM3CQ92520 227 aa9.57□□□□□ -0.88
CAPN3-208ENST00000397204 TCEAL4Q96EI5 215 aa9.57□□□□□ -0.88
CAPN3-208ENST00000397204 C8orf76Q96K31 380 aa9.57□□□□□ -0.88
CAPN3-208ENST00000397204 SUSD3Q96L08 255 aa9.57□□□□□ -0.88
CAPN3-208ENST00000397204 ZMAT2Q96NC0 199 aaKnown RBP9.57□□□□□ -0.88
CAPN3-208ENST00000397204 LLPHQ9BRT6 129 aaKnown RBP9.57□□□□□ -0.88
CAPN3-208ENST00000397204 TARS2Q9BW92 718 aaKnown RBP9.57□□□□□ -0.88
CAPN3-208ENST00000397204 OXCT2Q9BYC2 517 aaPredicted RBP9.57□□□□□ -0.88
CAPN3-208ENST00000397204 RAB34Q9BZG1 259 aa9.57□□□□□ -0.88
CAPN3-208ENST00000397204 CHRDQ9H2X0 955 aa9.57□□□□□ -0.88
CAPN3-208ENST00000397204 LMAN1LQ9HAT1 526 aa9.57□□□□□ -0.88
CAPN3-208ENST00000397204 ZNF334Q9HCZ1 680 aaPredicted RBP9.57□□□□□ -0.88
CAPN3-208ENST00000397204 KMT5AQ9NQR1 393 aa9.57□□□□□ -0.88
CAPN3-208ENST00000397204 DDX19AQ9NUU7 478 aaKnown RBP9.57□□□□□ -0.88
CAPN3-208ENST00000397204 CNTN3Q9P232 1028 aa9.57□□□□□ -0.88
CAPN3-208ENST00000397204 ARHGAP28Q9P2N2 729 aa9.57□□□□□ -0.88
CAPN3-208ENST00000397204 AFF4Q9UHB7 1163 aaKnown RBP9.57□□□□□ -0.88
CAPN3-208ENST00000397204 FBXL5Q9UKA1 691 aa9.57□□□□□ -0.88
CAPN3-208ENST00000397204 SMG5Q9UPR3 1016 aaKnown RBP9.57□□□□□ -0.88
CAPN3-208ENST00000397204 INSL5Q9Y5Q6 135 aa9.57□□□□□ -0.88
CAPN3-208ENST00000397204 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.57□□□□□ -0.88
CAPN3-208ENST00000397204 CNOT1A5YKK6 2376 aaKnown RBP9.57□□□□□ -0.88
CAPN3-208ENST00000397204 CFAP99D6REC4 459 aa9.56□□□□□ -0.88
CAPN3-208ENST00000397204 ZNF263O14978 683 aa9.56□□□□□ -0.88
CAPN3-208ENST00000397204 PROZP22891 400 aa9.56□□□□□ -0.88
CAPN3-208ENST00000397204 GDI1P31150 447 aa9.56□□□□□ -0.88
CAPN3-208ENST00000397204 CCR2P41597 374 aa9.56□□□□□ -0.88
CAPN3-208ENST00000397204 CXCL12P48061 93 aa9.56□□□□□ -0.88
CAPN3-208ENST00000397204 CCR3P51677 355 aa9.56□□□□□ -0.88
CAPN3-208ENST00000397204 EPHA5P54756 1037 aa9.56□□□□□ -0.88
CAPN3-208ENST00000397204 DMP1Q13316 513 aaPredicted RBP9.56□□□□□ -0.88
CAPN3-208ENST00000397204 QPCTQ16769 361 aa9.56□□□□□ -0.88
CAPN3-208ENST00000397204 KRT79Q5XKE5 535 aa9.56□□□□□ -0.88
CAPN3-208ENST00000397204 ZNF280DQ6N043 979 aa9.56□□□□□ -0.88
CAPN3-208ENST00000397204 C1orf228Q6PIY5 440 aa9.56□□□□□ -0.88
CAPN3-208ENST00000397204 MPZL3Q6UWV2 235 aa9.56□□□□□ -0.88
CAPN3-208ENST00000397204 DAW1Q8N136 415 aa9.56□□□□□ -0.88
CAPN3-208ENST00000397204 KCTD17Q8N5Z5 321 aa9.56□□□□□ -0.88
CAPN3-208ENST00000397204 MSANTD3Q96H12 275 aa9.56□□□□□ -0.88
CAPN3-208ENST00000397204 DRC1Q96MC2 740 aa9.56□□□□□ -0.88
CAPN3-208ENST00000397204 ZSWIM3Q96MP5 696 aa9.56□□□□□ -0.88
CAPN3-208ENST00000397204 RTKNQ9BST9 563 aa9.56□□□□□ -0.88
CAPN3-208ENST00000397204 TIPINQ9BVW5 301 aa9.56□□□□□ -0.88
CAPN3-208ENST00000397204 PLEKHA5Q9HAU0 1116 aa9.56□□□□□ -0.88
CAPN3-208ENST00000397204 CEP72Q9P209 647 aa9.56□□□□□ -0.88
CAPN3-208ENST00000397204 GMEB2Q9UKD1 530 aa9.56□□□□□ -0.88
CAPN3-208ENST00000397204 RAB23Q9ULC3 237 aa9.56□□□□□ -0.88
CAPN3-208ENST00000397204 NOL7Q9UMY1 257 aaKnown RBP9.56□□□□□ -0.88
CAPN3-208ENST00000397204 NDRG2Q9UN36 371 aaKnown RBP9.56□□□□□ -0.88
CAPN3-208ENST00000397204 LIMCH1Q9UPQ0 1083 aa9.56□□□□□ -0.88
CAPN3-208ENST00000397204 NOTCH4Q99466 2003 aa9.56□□□□□ -0.88
CAPN3-208ENST00000397204 ARID2Q68CP9 1835 aa9.56□□□□□ -0.88
CAPN3-208ENST00000397204 LAD1O00515 517 aa9.55□□□□□ -0.88
CAPN3-208ENST00000397204 ABLIM1O14639 778 aa9.55□□□□□ -0.88
CAPN3-208ENST00000397204 LRP3O75074 770 aa9.55□□□□□ -0.88
CAPN3-208ENST00000397204 HIP1RO75146 1068 aa9.55□□□□□ -0.88
CAPN3-208ENST00000397204 MOSPD3O75425 235 aa9.55□□□□□ -0.88
CAPN3-208ENST00000397204 TOM1L1O75674 476 aa9.55□□□□□ -0.88
CAPN3-208ENST00000397204 OAZ2O95190 189 aa9.55□□□□□ -0.88
CAPN3-208ENST00000397204 RETP07949 1114 aa9.55□□□□□ -0.88
CAPN3-208ENST00000397204 TDGF1P13385 188 aa9.55□□□□□ -0.88
CAPN3-208ENST00000397204 CNR2P34972 360 aa9.55□□□□□ -0.88
CAPN3-208ENST00000397204 SMTNP53814 917 aa9.55□□□□□ -0.88
CAPN3-208ENST00000397204 TWF1Q12792 350 aa9.55□□□□□ -0.88
CAPN3-208ENST00000397204 FOXC1Q12948 553 aa9.55□□□□□ -0.88
CAPN3-208ENST00000397204 STRN3Q13033 797 aa9.55□□□□□ -0.88
CAPN3-208ENST00000397204 GNL2Q13823 731 aaKnown RBP9.55□□□□□ -0.88
CAPN3-208ENST00000397204 GRM2Q14416 872 aa9.55□□□□□ -0.88
CAPN3-208ENST00000397204 SLC10A6Q3KNW5 377 aa9.55□□□□□ -0.88
CAPN3-208ENST00000397204 LAIR1Q6GTX8 287 aa9.55□□□□□ -0.88
CAPN3-208ENST00000397204 RINT1Q6NUQ1 792 aa9.55□□□□□ -0.88
CAPN3-208ENST00000397204 VITQ6UXI7 678 aa9.55□□□□□ -0.88
CAPN3-208ENST00000397204 C1orf186Q6ZWK4 172 aa9.55□□□□□ -0.88
CAPN3-208ENST00000397204 TAS1R3Q7RTX0 852 aa9.55□□□□□ -0.88
CAPN3-208ENST00000397204 SNX29Q8TEQ0 813 aa9.55□□□□□ -0.88
CAPN3-208ENST00000397204 C18orf25Q96B23 403 aaPredicted RBP9.55□□□□□ -0.88
CAPN3-208ENST00000397204 TBC1D32Q96NH3 1257 aa9.55□□□□□ -0.88
CAPN3-208ENST00000397204 C8orf33Q9H7E9 229 aaPredicted RBP9.55□□□□□ -0.88
CAPN3-208ENST00000397204 ASAH2Q9NR71 780 aa9.55□□□□□ -0.88
CAPN3-208ENST00000397204 CDV3Q9UKY7 258 aaKnown RBP9.55□□□□□ -0.88
CAPN3-208ENST00000397204 USP18Q9UMW8 372 aa9.55□□□□□ -0.88
CAPN3-208ENST00000397204 PIAS3Q9Y6X2 628 aa9.55□□□□□ -0.88
CAPN3-208ENST00000397204 CHD6Q8TD26 2715 aa9.54□□□□□ -0.88
CAPN3-208ENST00000397204 SFI1A8K8P3 1242 aa9.54□□□□□ -0.88
CAPN3-208ENST00000397204 E9PMD0 336 aa9.54□□□□□ -0.88
CAPN3-208ENST00000397204 M0QZQ0 153 aa9.54□□□□□ -0.88
CAPN3-208ENST00000397204 CHADO15335 359 aa9.54□□□□□ -0.88
CAPN3-208ENST00000397204 SLC16A4O15374 487 aa9.54□□□□□ -0.88
CAPN3-208ENST00000397204 CLDN3O15551 220 aa9.54□□□□□ -0.88
CAPN3-208ENST00000397204 GDF9O60383 454 aa9.54□□□□□ -0.88
CAPN3-208ENST00000397204 FOXD2O60548 495 aaPredicted RBP9.54□□□□□ -0.88
CAPN3-208ENST00000397204 CLTAP09496 248 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms