RNA–Protein interactions for RNA: ENST00000397108.8

FGFR1-208, Transcript of fibroblast growth factor receptor 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene FGFR1, Length 2,870 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-208ENST00000397108 VPS36Q86VN1 386 aa12.48□□□□□ -0.41
FGFR1-208ENST00000397108 MAGEB18Q96M61 343 aa12.48□□□□□ -0.41
FGFR1-208ENST00000397108 TRAPPC9Q96Q05 1148 aa12.48□□□□□ -0.41
FGFR1-208ENST00000397108 AMNQ9BXJ7 453 aa12.48□□□□□ -0.41
FGFR1-208ENST00000397108 UNC93B1Q9H1C4 597 aa12.48□□□□□ -0.41
FGFR1-208ENST00000397108 DCLRE1BQ9H816 532 aa12.48□□□□□ -0.41
FGFR1-208ENST00000397108 BARHL2Q9NY43 387 aa12.48□□□□□ -0.41
FGFR1-208ENST00000397108 USP20Q9Y2K6 914 aa12.48□□□□□ -0.41
FGFR1-208ENST00000397108 PNMA6FA0A0J9YX94 578 aa12.48□□□□□ -0.41
FGFR1-208ENST00000397108 PPP1R11O60927 126 aaPredicted RBP12.48□□□□□ -0.41
FGFR1-208ENST00000397108 PHF2O75151 1096 aa12.48□□□□□ -0.41
FGFR1-208ENST00000397108 TDP2O95551 362 aa12.48□□□□□ -0.41
FGFR1-208ENST00000397108 PRKAR2AP13861 404 aaKnown RBP12.48□□□□□ -0.41
FGFR1-208ENST00000397108 CACNB2Q08289 660 aaPredicted RBP12.48□□□□□ -0.41
FGFR1-208ENST00000397108 CALCRLQ16602 461 aa12.48□□□□□ -0.41
FGFR1-208ENST00000397108 CNPY1Q3B7I2 92 aa12.48□□□□□ -0.41
FGFR1-208ENST00000397108 DYDC2Q96IM9 177 aa12.48□□□□□ -0.41
FGFR1-208ENST00000397108 PIGSQ96S52 555 aa12.48□□□□□ -0.41
FGFR1-208ENST00000397108 TMEM109Q9BVC6 243 aa12.48□□□□□ -0.41
FGFR1-208ENST00000397108 TMEM106CQ9BVX2 250 aa12.48□□□□□ -0.41
FGFR1-208ENST00000397108 THAP2Q9H0W7 228 aa12.48□□□□□ -0.41
FGFR1-208ENST00000397108 MMADHCQ9H3L0 296 aaPredicted RBP12.48□□□□□ -0.41
FGFR1-208ENST00000397108 SH3GLB2Q9NR46 395 aa12.48□□□□□ -0.41
FGFR1-208ENST00000397108 LNPEPQ9UIQ6 1025 aa12.48□□□□□ -0.41
FGFR1-208ENST00000397108 PHTF1Q9UMS5 762 aa12.48□□□□□ -0.41
FGFR1-208ENST00000397108 MAPK13O15264 365 aa12.47□□□□□ -0.41
FGFR1-208ENST00000397108 VPS41P49754 854 aa12.47□□□□□ -0.41
FGFR1-208ENST00000397108 NEK3P51956 506 aa12.47□□□□□ -0.41
FGFR1-208ENST00000397108 TMEM62Q0P6H9 643 aa12.47□□□□□ -0.41
FGFR1-208ENST00000397108 KPNB1Q14974 876 aaKnown RBP12.47□□□□□ -0.41
FGFR1-208ENST00000397108 CROCCP2Q86T23 111 aa12.47□□□□□ -0.41
FGFR1-208ENST00000397108 CPNE8Q86YQ8 564 aa12.47□□□□□ -0.41
FGFR1-208ENST00000397108 DNAJC19Q96DA6 116 aa12.47□□□□□ -0.41
FGFR1-208ENST00000397108 MIPEPQ99797 713 aa12.47□□□□□ -0.41
FGFR1-208ENST00000397108 DMAP1Q9NPF5 467 aaPredicted RBP12.47□□□□□ -0.41
FGFR1-208ENST00000397108 PAK6Q9NQU5 681 aaPredicted RBP12.47□□□□□ -0.41
FGFR1-208ENST00000397108 TTC7AQ9ULT0 858 aaPredicted RBP12.47□□□□□ -0.41
FGFR1-208ENST00000397108 COG5Q9UP83 839 aa12.47□□□□□ -0.41
FGFR1-208ENST00000397108 BZW2Q9Y6E2 419 aaKnown RBP12.47□□□□□ -0.41
FGFR1-208ENST00000397108 KIAA0100Q14667 2235 aaKnown RBP12.47□□□□□ -0.41
FGFR1-208ENST00000397108 LRRC37A2A6NM11 1700 aa12.47□□□□□ -0.41
FGFR1-208ENST00000397108 E9PMD0 336 aa12.47□□□□□ -0.41
FGFR1-208ENST00000397108 MYCP01106 439 aaPredicted RBP12.47□□□□□ -0.41
FGFR1-208ENST00000397108 WDR4P57081 412 aaKnown RBP12.47□□□□□ -0.41
FGFR1-208ENST00000397108 WASHC2DQ5SRD0 308 aa12.47□□□□□ -0.41
FGFR1-208ENST00000397108 DPY19L2P1Q6NXN4 242 aa12.47□□□□□ -0.41
FGFR1-208ENST00000397108 NSMFQ6X4W1 530 aa12.47□□□□□ -0.41
FGFR1-208ENST00000397108 PALB2Q86YC2 1186 aa12.47□□□□□ -0.41
FGFR1-208ENST00000397108 APLFQ8IW19 511 aaPredicted RBP12.47□□□□□ -0.41
FGFR1-208ENST00000397108 KBTBD2Q8IY47 623 aa12.47□□□□□ -0.41
FGFR1-208ENST00000397108 SCFD1Q8WVM8 642 aa12.47□□□□□ -0.41
FGFR1-208ENST00000397108 CTNNBL1Q8WYA6 563 aaPredicted RBP12.47□□□□□ -0.41
FGFR1-208ENST00000397108 MRRFQ96E11 262 aaKnown RBP12.47□□□□□ -0.41
FGFR1-208ENST00000397108 RNF208Q9H0X6 261 aa12.47□□□□□ -0.41
FGFR1-208ENST00000397108 CARD9Q9H257 536 aa12.47□□□□□ -0.41
FGFR1-208ENST00000397108 MRPL11Q9Y3B7 192 aaKnown RBP12.47□□□□□ -0.41
FGFR1-208ENST00000397108 TBX10O75333 385 aa12.46□□□□□ -0.41
FGFR1-208ENST00000397108 MARK3P27448 753 aa12.46□□□□□ -0.41
FGFR1-208ENST00000397108 DRG2P55039 364 aaKnown RBP12.46□□□□□ -0.41
FGFR1-208ENST00000397108 DEUP1Q05D60 604 aa12.46□□□□□ -0.41
FGFR1-208ENST00000397108 ACSBG2Q5FVE4 666 aa12.46□□□□□ -0.41
FGFR1-208ENST00000397108 KRT79Q5XKE5 535 aa12.46□□□□□ -0.41
FGFR1-208ENST00000397108 MAMDC4Q6UXC1 1216 aa12.46□□□□□ -0.41
FGFR1-208ENST00000397108 ARHGEF18Q6ZSZ5 1173 aa12.46□□□□□ -0.41
FGFR1-208ENST00000397108 PLEKHG4BQ96PX9 1271 aa12.46□□□□□ -0.41
FGFR1-208ENST00000397108 TINF2Q9BSI4 451 aa12.46□□□□□ -0.41
FGFR1-208ENST00000397108 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.46□□□□□ -0.418e-12■■□□□ 12.6
FGFR1-208ENST00000397108 ZWILCHQ9H900 591 aa12.46□□□□□ -0.41
FGFR1-208ENST00000397108 HMX1Q9NP08 348 aaPredicted RBP12.46□□□□□ -0.41
FGFR1-208ENST00000397108 STK17AQ9UEE5 414 aa12.46□□□□□ -0.41
FGFR1-208ENST00000397108 PCDHA3Q9Y5H8 950 aa12.46□□□□□ -0.41
FGFR1-208ENST00000397108 NUMBLQ9Y6R0 609 aa12.46□□□□□ -0.41
FGFR1-208ENST00000397108 SYNGAP1Q96PV0 1343 aa12.46□□□□□ -0.41
FGFR1-208ENST00000397108 MAGEA13PA6NCF6 341 aa12.46□□□□□ -0.42
FGFR1-208ENST00000397108 CAPN15O75808 1086 aa12.46□□□□□ -0.42
FGFR1-208ENST00000397108 GNA14O95837 355 aa12.46□□□□□ -0.42
FGFR1-208ENST00000397108 GJB1P08034 283 aa12.46□□□□□ -0.42
FGFR1-208ENST00000397108 INHBCP55103 352 aa12.46□□□□□ -0.42
FGFR1-208ENST00000397108 SOX10P56693 466 aa12.46□□□□□ -0.42
FGFR1-208ENST00000397108 CNTN2Q02246 1040 aa12.46□□□□□ -0.42
FGFR1-208ENST00000397108 CCDC15Q0P6D6 951 aa12.46□□□□□ -0.42
FGFR1-208ENST00000397108 CALCOCO2Q13137 446 aa12.46□□□□□ -0.42
FGFR1-208ENST00000397108 GIT2Q14161 759 aa12.46□□□□□ -0.42
FGFR1-208ENST00000397108 CMPK2Q5EBM0 449 aa12.46□□□□□ -0.42
FGFR1-208ENST00000397108 LRRC74BQ6ZQY2 392 aa12.46□□□□□ -0.42
FGFR1-208ENST00000397108 C4orf50Q6ZRC1 276 aa12.46□□□□□ -0.42
FGFR1-208ENST00000397108 MYLK4Q86YV6 388 aaPredicted RBP12.46□□□□□ -0.42
FGFR1-208ENST00000397108 RFFLQ8WZ73 363 aa12.46□□□□□ -0.42
FGFR1-208ENST00000397108 PTPRN2Q92932 1015 aa12.46□□□□□ -0.42
FGFR1-208ENST00000397108 ART4Q93070 314 aa12.46□□□□□ -0.42
FGFR1-208ENST00000397108 CEP63Q96MT8 703 aa12.46□□□□□ -0.42
FGFR1-208ENST00000397108 SERPINB12Q96P63 405 aa12.46□□□□□ -0.42
FGFR1-208ENST00000397108 ROPN1BQ9BZX4 212 aaPredicted RBP12.46□□□□□ -0.42
FGFR1-208ENST00000397108 ROPN1Q9HAT0 212 aaPredicted RBP12.46□□□□□ -0.42
FGFR1-208ENST00000397108 AAASQ9NRG9 546 aa12.46□□□□□ -0.42
FGFR1-208ENST00000397108 NAALADL1Q9UQQ1 740 aa12.46□□□□□ -0.42
FGFR1-208ENST00000397108 PCDHA1Q9Y5I3 950 aa12.46□□□□□ -0.42
FGFR1-208ENST00000397108 ALG6Q9Y672 507 aa12.46□□□□□ -0.42
FGFR1-208ENST00000397108 WASF2Q9Y6W5 498 aa12.46□□□□□ -0.42
FGFR1-208ENST00000397108 BRCA2P51587 3418 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms