RNA–Protein interactions for RNA: ENST00000396653.2

AP1S3-202, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 4 BASIC

Gene AP1S3, Length 589 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-202ENST00000396653 OXCT2Q9BYC2 517 aaPredicted RBP17.64■□□□□ 0.41
AP1S3-202ENST00000396653 MRPL17Q9NRX2 175 aaKnown RBP17.64■□□□□ 0.41
AP1S3-202ENST00000396653 MTMR10Q9NXD2 777 aa17.64■□□□□ 0.41
AP1S3-202ENST00000396653 LIMA1Q9UHB6 759 aaKnown RBP17.64■□□□□ 0.41
AP1S3-202ENST00000396653 CHD7Q9P2D1 2997 aa17.64■□□□□ 0.41
AP1S3-202ENST00000396653 H7C4K7 107 aa17.63■□□□□ 0.41
AP1S3-202ENST00000396653 CYB561D2O14569 222 aa17.63■□□□□ 0.41
AP1S3-202ENST00000396653 HUS1O60921 280 aa17.63■□□□□ 0.41
AP1S3-202ENST00000396653 TPM2P07951 284 aa17.63■□□□□ 0.41
AP1S3-202ENST00000396653 P4HA1P13674 534 aa17.63■□□□□ 0.41
AP1S3-202ENST00000396653 IRS1P35568 1242 aa17.63■□□□□ 0.41
AP1S3-202ENST00000396653 TNNC1P63316 161 aa17.63■□□□□ 0.41
AP1S3-202ENST00000396653 NOP14P78316 857 aaKnown RBP17.63■□□□□ 0.41
AP1S3-202ENST00000396653 MRPL58Q14197 206 aaKnown RBP17.63■□□□□ 0.41
AP1S3-202ENST00000396653 ADGRE1Q14246 886 aa17.63■□□□□ 0.41
AP1S3-202ENST00000396653 KRT31Q15323 416 aa17.63■□□□□ 0.41
AP1S3-202ENST00000396653 MIIPQ5JXC2 388 aa17.63■□□□□ 0.41
AP1S3-202ENST00000396653 VARS2Q5ST30 1063 aaKnown RBP17.63■□□□□ 0.41
AP1S3-202ENST00000396653 PLPP4Q5VZY2 271 aa17.63■□□□□ 0.41
AP1S3-202ENST00000396653 CEP57Q86XR8 500 aa17.63■□□□□ 0.41
AP1S3-202ENST00000396653 MRPL43Q8N983 215 aaKnown RBP17.63■□□□□ 0.41
AP1S3-202ENST00000396653 PPP2R3CQ969Q6 453 aa17.63■□□□□ 0.41
AP1S3-202ENST00000396653 GUCD1Q96NT3 240 aa17.63■□□□□ 0.41
AP1S3-202ENST00000396653 CDX2Q99626 313 aaPredicted RBP17.63■□□□□ 0.41
AP1S3-202ENST00000396653 NDST4Q9H3R1 872 aa17.63■□□□□ 0.41
AP1S3-202ENST00000396653 RXFP1Q9HBX9 757 aa17.63■□□□□ 0.41
AP1S3-202ENST00000396653 FNIP2Q9P278 1114 aa17.63■□□□□ 0.41
AP1S3-202ENST00000396653 MTRRQ9UBK8 725 aa17.63■□□□□ 0.41
AP1S3-202ENST00000396653 SNX9Q9Y5X1 595 aa17.63■□□□□ 0.41
AP1S3-202ENST00000396653 BACE2Q9Y5Z0 518 aa17.63■□□□□ 0.41
AP1S3-202ENST00000396653 MYO7AQ13402 2215 aa17.62■□□□□ 0.41
AP1S3-202ENST00000396653 FSD2A1L4K1 749 aa17.62■□□□□ 0.41
AP1S3-202ENST00000396653 C2orf71A6NGG8 1288 aa17.62■□□□□ 0.41
AP1S3-202ENST00000396653 LRRC10BA6NIK2 292 aa17.62■□□□□ 0.41
AP1S3-202ENST00000396653 GOLGA6L19H0YKK7 550 aa17.62■□□□□ 0.41
AP1S3-202ENST00000396653 TACC1O75410 805 aa17.62■□□□□ 0.41
AP1S3-202ENST00000396653 OAZ2O95190 189 aa17.62■□□□□ 0.41
AP1S3-202ENST00000396653 CDK11BP21127 795 aaKnown RBP17.62■□□□□ 0.41
AP1S3-202ENST00000396653 YWHAHQ04917 246 aaPredicted RBP17.62■□□□□ 0.41
AP1S3-202ENST00000396653 PSMD5Q16401 504 aa17.62■□□□□ 0.41
AP1S3-202ENST00000396653 WDR72Q3MJ13 1102 aa17.62■□□□□ 0.41
AP1S3-202ENST00000396653 WDR44Q5JSH3 913 aa17.62■□□□□ 0.41
AP1S3-202ENST00000396653 ZNF280DQ6N043 979 aa17.62■□□□□ 0.41
AP1S3-202ENST00000396653 LUZP1Q86V48 1076 aa17.62■□□□□ 0.41
AP1S3-202ENST00000396653 LNX1Q8TBB1 728 aaPredicted RBP17.62■□□□□ 0.41
AP1S3-202ENST00000396653 MICAL1Q8TDZ2 1067 aa17.62■□□□□ 0.41
AP1S3-202ENST00000396653 RIN2Q8WYP3 895 aaPredicted RBP17.62■□□□□ 0.41
AP1S3-202ENST00000396653 SEMA4DQ92854 862 aa17.62■□□□□ 0.41
AP1S3-202ENST00000396653 FAM124BQ9H5Z6 455 aaPredicted RBP17.62■□□□□ 0.41
AP1S3-202ENST00000396653 NSUN3Q9H649 340 aaKnown RBP17.62■□□□□ 0.41
AP1S3-202ENST00000396653 TAB2Q9NYJ8 693 aa17.62■□□□□ 0.41
AP1S3-202ENST00000396653 L1RE1Q9UN81 338 aa17.62■□□□□ 0.41
AP1S3-202ENST00000396653 MTCH2Q9Y6C9 303 aa17.62■□□□□ 0.41
AP1S3-202ENST00000396653 MTCL1Q9Y4B5 1905 aaKnown RBP17.62■□□□□ 0.41
AP1S3-202ENST00000396653 PLXNA3P51805 1871 aa17.61■□□□□ 0.41
AP1S3-202ENST00000396653 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.61■□□□□ 0.41
AP1S3-202ENST00000396653 CXCL14O95715 111 aa17.61■□□□□ 0.41
AP1S3-202ENST00000396653 COPB1P53618 953 aaKnown RBP17.61■□□□□ 0.41
AP1S3-202ENST00000396653 OVOS1Q6IE37 1185 aa17.61■□□□□ 0.41
AP1S3-202ENST00000396653 METTL23Q86XA0 190 aa17.61■□□□□ 0.41
AP1S3-202ENST00000396653 ADGRF2Q8IZF7 708 aa17.61■□□□□ 0.41
AP1S3-202ENST00000396653 PDCL2Q8N4E4 241 aa17.61■□□□□ 0.41
AP1S3-202ENST00000396653 LMO3Q8TAP4 145 aa17.61■□□□□ 0.41
AP1S3-202ENST00000396653 B3GALT6Q96L58 329 aa17.61■□□□□ 0.41
AP1S3-202ENST00000396653 CDCA3Q99618 268 aaPredicted RBP17.61■□□□□ 0.41
AP1S3-202ENST00000396653 EMILIN2Q9BXX0 1053 aa17.61■□□□□ 0.41
AP1S3-202ENST00000396653 NIF3L1Q9GZT8 377 aa17.61■□□□□ 0.41
AP1S3-202ENST00000396653 PRRC2BQ5JSZ5 2229 aaKnown RBP17.61■□□□□ 0.41
AP1S3-202ENST00000396653 TBC1D4O60343 1298 aa17.6■□□□□ 0.41
AP1S3-202ENST00000396653 C1RP00736 705 aa17.6■□□□□ 0.41
AP1S3-202ENST00000396653 ATP1A3P13637 1013 aa17.6■□□□□ 0.41
AP1S3-202ENST00000396653 WARSP23381 471 aaKnown RBP17.6■□□□□ 0.41
AP1S3-202ENST00000396653 LHX1P48742 406 aa17.6■□□□□ 0.41
AP1S3-202ENST00000396653 NDUFV1P49821 464 aa17.6■□□□□ 0.41
AP1S3-202ENST00000396653 SOWAHAQ2M3V2 549 aa17.6■□□□□ 0.41
AP1S3-202ENST00000396653 WSCD1Q658N2 575 aa17.6■□□□□ 0.41
AP1S3-202ENST00000396653 PRSS55Q6UWB4 352 aaPredicted RBP17.6■□□□□ 0.41
AP1S3-202ENST00000396653 GBP6Q6ZN66 633 aa17.6■□□□□ 0.41
AP1S3-202ENST00000396653 APTXQ7Z2E3 356 aaKnown RBP17.6■□□□□ 0.41
AP1S3-202ENST00000396653 EHBP1Q8NDI1 1231 aa17.6■□□□□ 0.41
AP1S3-202ENST00000396653 AUTS2Q8WXX7 1259 aa17.6■□□□□ 0.41
AP1S3-202ENST00000396653 MYLIPQ8WY64 445 aa17.6■□□□□ 0.41
AP1S3-202ENST00000396653 PI4K2AQ9BTU6 479 aa17.6■□□□□ 0.41
AP1S3-202ENST00000396653 BCO2Q9BYV7 579 aa17.6■□□□□ 0.41
AP1S3-202ENST00000396653 CYP3A43Q9HB55 503 aa17.6■□□□□ 0.41
AP1S3-202ENST00000396653 APOBEC3GQ9HC16 384 aaKnown RBP17.6■□□□□ 0.41
AP1S3-202ENST00000396653 GCNT4Q9P109 453 aa17.6■□□□□ 0.41
AP1S3-202ENST00000396653 NXF1Q9UBU9 619 aaKnown RBP17.6■□□□□ 0.41
AP1S3-202ENST00000396653 OR6C75A6NL08 312 aa17.59■□□□□ 0.41
AP1S3-202ENST00000396653 LGALS16A8MUM7 142 aa17.59■□□□□ 0.41
AP1S3-202ENST00000396653 HIDE1A8MVS5 230 aa17.59■□□□□ 0.41
AP1S3-202ENST00000396653 C2CD2LO14523 706 aa17.59■□□□□ 0.41
AP1S3-202ENST00000396653 GABRDO14764 452 aa17.59■□□□□ 0.41
AP1S3-202ENST00000396653 CLSTN1O94985 981 aa17.59■□□□□ 0.41
AP1S3-202ENST00000396653 ADH1AP07327 375 aa17.59■□□□□ 0.41
AP1S3-202ENST00000396653 ASPAP45381 313 aa17.59■□□□□ 0.41
AP1S3-202ENST00000396653 DUSP6Q16828 381 aa17.59■□□□□ 0.41
AP1S3-202ENST00000396653 EXOC3L4Q17RC7 722 aa17.59■□□□□ 0.41
AP1S3-202ENST00000396653 CTXN3Q4LDR2 81 aa17.59■□□□□ 0.41
AP1S3-202ENST00000396653 SPOPLQ6IQ16 392 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms