RNA–Protein interactions for RNA: ENST00000396594.7

GNE-202, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 5,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-202ENST00000396594 IL10P22301 178 aa16.39■□□□□ 0.21
GNE-202ENST00000396594 NME3Q13232 169 aa16.39■□□□□ 0.21
GNE-202ENST00000396594 ARHGEF7Q14155 803 aa16.39■□□□□ 0.21
GNE-202ENST00000396594 METTL7BQ6UX53 244 aa16.39■□□□□ 0.21
GNE-202ENST00000396594 PPP1R16BQ96T49 567 aa16.39■□□□□ 0.21
GNE-202ENST00000396594 MRPL9Q9BYD2 267 aaKnown RBP16.39■□□□□ 0.21
GNE-202ENST00000396594 RGL1Q9NZL6 768 aa16.39■□□□□ 0.21
GNE-202ENST00000396594 HOXB8P17481 243 aaPredicted RBP16.38■□□□□ 0.21
GNE-202ENST00000396594 CUL2Q13617 745 aa16.38■□□□□ 0.21
GNE-202ENST00000396594 TAF2Q6P1X5 1199 aa16.38■□□□□ 0.21
GNE-202ENST00000396594 FOXR2Q6PJQ5 311 aa16.38■□□□□ 0.21
GNE-202ENST00000396594 NLRP9Q7RTR0 991 aa16.38■□□□□ 0.21
GNE-202ENST00000396594 TXNRD3Q86VQ6 643 aa16.38■□□□□ 0.21
GNE-202ENST00000396594 PPIL6Q8IXY8 311 aa16.38■□□□□ 0.21
GNE-202ENST00000396594 VCPIP1Q96JH7 1222 aa16.38■□□□□ 0.21
GNE-202ENST00000396594 OLFM3Q96PB7 478 aa16.38■□□□□ 0.21
GNE-202ENST00000396594 GNL1P36915 607 aaPredicted RBP16.38■□□□□ 0.21
GNE-202ENST00000396594 OSCP1Q8WVF1 389 aa16.38■□□□□ 0.21
GNE-202ENST00000396594 SNX5Q9Y5X3 404 aa16.38■□□□□ 0.21
GNE-202ENST00000396594 SLCO1A2P46721 670 aa16.38■□□□□ 0.21
GNE-202ENST00000396594 DMTNQ08495 405 aa16.38■□□□□ 0.21
GNE-202ENST00000396594 AASDHQ4L235 1098 aaPredicted RBP16.38■□□□□ 0.21
GNE-202ENST00000396594 SYTL3Q4VX76 610 aa16.38■□□□□ 0.21
GNE-202ENST00000396594 ITIH5Q86UX2 942 aa16.38■□□□□ 0.21
GNE-202ENST00000396594 RNF168Q8IYW5 571 aaPredicted RBP16.38■□□□□ 0.21
GNE-202ENST00000396594 RMDN1Q96DB5 314 aa16.38■□□□□ 0.21
GNE-202ENST00000396594 HPDLQ96IR7 371 aa16.38■□□□□ 0.21
GNE-202ENST00000396594 TRIM4Q9C037 500 aa16.38■□□□□ 0.21
GNE-202ENST00000396594 WDR70Q9NW82 654 aa16.38■□□□□ 0.21
GNE-202ENST00000396594 PSD3Q9NYI0 1048 aa16.38■□□□□ 0.21
GNE-202ENST00000396594 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.38■□□□□ 0.21
GNE-202ENST00000396594 PCSK1NQ9UHG2 260 aa16.38■□□□□ 0.21
GNE-202ENST00000396594 POLIQ9UNA4 740 aa16.38■□□□□ 0.21
GNE-202ENST00000396594 MEGF6O75095 1541 aa16.38■□□□□ 0.21
GNE-202ENST00000396594 PLSCR1O15162 318 aa16.38■□□□□ 0.21
GNE-202ENST00000396594 SEC31AO94979 1220 aaKnown RBP16.38■□□□□ 0.21
GNE-202ENST00000396594 HUNKP57058 714 aa16.38■□□□□ 0.21
GNE-202ENST00000396594 USP50Q70EL3 339 aaPredicted RBP16.38■□□□□ 0.21
GNE-202ENST00000396594 ATP5BP06576 529 aaKnown RBP16.37■□□□□ 0.21
GNE-202ENST00000396594 BCAT1P54687 386 aa16.37■□□□□ 0.21
GNE-202ENST00000396594 MYL6P60660 151 aa16.37■□□□□ 0.21
GNE-202ENST00000396594 ACAP1Q15027 740 aa16.37■□□□□ 0.21
GNE-202ENST00000396594 C16orf89Q6UX73 402 aa16.37■□□□□ 0.21
GNE-202ENST00000396594 PCYOX1LQ8NBM8 494 aa16.37■□□□□ 0.21
GNE-202ENST00000396594 TBCBQ99426 244 aa16.37■□□□□ 0.21
GNE-202ENST00000396594 HEMGNQ9BXL5 484 aa16.37■□□□□ 0.21
GNE-202ENST00000396594 AGPAT3Q9NRZ7 376 aa16.37■□□□□ 0.21
GNE-202ENST00000396594 ARHGEF38Q9NXL2 777 aa16.37■□□□□ 0.21
GNE-202ENST00000396594 ARL2BPQ9Y2Y0 163 aa16.37■□□□□ 0.21
GNE-202ENST00000396594 TTC39BQ5VTQ0 682 aaPredicted RBP16.37■□□□□ 0.21
GNE-202ENST00000396594 TGS1Q96RS0 853 aaKnown RBP16.37■□□□□ 0.21
GNE-202ENST00000396594 RANBP17Q9H2T7 1088 aaKnown RBP16.37■□□□□ 0.21
GNE-202ENST00000396594 GOLPH3Q9H4A6 298 aa16.37■□□□□ 0.21
GNE-202ENST00000396594 MROH1Q8NDA8 1641 aa16.37■□□□□ 0.21
GNE-202ENST00000396594 LCP1P13796 627 aa16.37■□□□□ 0.21
GNE-202ENST00000396594 GUCY1A2P33402 732 aa16.37■□□□□ 0.21
GNE-202ENST00000396594 PRKAA2P54646 552 aa16.37■□□□□ 0.21
GNE-202ENST00000396594 NAA20P61599 178 aa16.37■□□□□ 0.21
GNE-202ENST00000396594 RPS6P62753 249 aaKnown RBP16.37■□□□□ 0.21
GNE-202ENST00000396594 SPON2Q9BUD6 331 aa16.37■□□□□ 0.21
GNE-202ENST00000396594 MSH4O15457 936 aa16.37■□□□□ 0.21
GNE-202ENST00000396594 TCF7P36402 384 aaPredicted RBP16.37■□□□□ 0.21
GNE-202ENST00000396594 RENBPP51606 427 aa16.37■□□□□ 0.21
GNE-202ENST00000396594 DCAF6Q58WW2 860 aa16.37■□□□□ 0.21
GNE-202ENST00000396594 FBXO38Q6PIJ6 1188 aa16.37■□□□□ 0.21
GNE-202ENST00000396594 NCLNQ969V3 563 aa16.37■□□□□ 0.21
GNE-202ENST00000396594 OSBPL8Q9BZF1 889 aa16.37■□□□□ 0.21
GNE-202ENST00000396594 MTO1Q9Y2Z2 717 aaKnown RBP16.37■□□□□ 0.21
GNE-202ENST00000396594 RSPH10B2B2RC85 870 aa16.36■□□□□ 0.21
GNE-202ENST00000396594 MSCO60682 206 aa16.36■□□□□ 0.21
GNE-202ENST00000396594 SLC4A1P02730 911 aa16.36■□□□□ 0.21
GNE-202ENST00000396594 SNRPAP09012 282 aaKnown RBP16.36■□□□□ 0.21
GNE-202ENST00000396594 RSPH10BP0C881 870 aa16.36■□□□□ 0.21
GNE-202ENST00000396594 PDAP1Q13442 181 aaKnown RBP16.36■□□□□ 0.21
GNE-202ENST00000396594 TAS2R42Q7RTR8 314 aa16.36■□□□□ 0.21
GNE-202ENST00000396594 AGGF1Q8N302 714 aaeCLIP16.36■□□□□ 0.211e-7■□□□□ 11.2
GNE-202ENST00000396594 STX19Q8N4C7 294 aa16.36■□□□□ 0.21
GNE-202ENST00000396594 SH3KBP1Q96B97 665 aa16.36■□□□□ 0.21
GNE-202ENST00000396594 KCNK16Q96T55 309 aa16.36■□□□□ 0.21
GNE-202ENST00000396594 GRID1Q9ULK0 1009 aa16.36■□□□□ 0.21
GNE-202ENST00000396594 IPPQ9Y573 584 aa16.36■□□□□ 0.21
GNE-202ENST00000396594 CDY2AQ9Y6F7 541 aa16.36■□□□□ 0.21
GNE-202ENST00000396594 CDY1Q9Y6F8 540 aa16.36■□□□□ 0.21
GNE-202ENST00000396594 ZNF200P98182 395 aaPredicted RBP16.36■□□□□ 0.21
GNE-202ENST00000396594 RARS2Q5T160 578 aaKnown RBP16.36■□□□□ 0.21
GNE-202ENST00000396594 NFRKBQ6P4R8 1299 aa16.36■□□□□ 0.21
GNE-202ENST00000396594 ZPBP2Q6X784 338 aa16.36■□□□□ 0.21
GNE-202ENST00000396594 ATG4CQ96DT6 458 aa16.36■□□□□ 0.21
GNE-202ENST00000396594 ISCUQ9H1K1 167 aa16.36■□□□□ 0.21
GNE-202ENST00000396594 ASB7Q9H672 318 aa16.36■□□□□ 0.21
GNE-202ENST00000396594 ZDHHC9Q9Y397 364 aa16.36■□□□□ 0.21
GNE-202ENST00000396594 PP2D1A8MPX8 630 aa16.36■□□□□ 0.21
GNE-202ENST00000396594 KCNN4O15554 427 aa16.36■□□□□ 0.21
GNE-202ENST00000396594 NDUFS3O75489 264 aa16.36■□□□□ 0.21
GNE-202ENST00000396594 MAGEA9P43362 315 aa16.36■□□□□ 0.21
GNE-202ENST00000396594 OR6P1Q8NGX9 317 aa16.36■□□□□ 0.21
GNE-202ENST00000396594 HNRNPLLQ8WVV9 542 aaKnown RBP16.36■□□□□ 0.21
GNE-202ENST00000396594 DNAJC7Q99615 494 aa16.36■□□□□ 0.21
GNE-202ENST00000396594 CPVLQ9H3G5 476 aa16.36■□□□□ 0.21
GNE-202ENST00000396594 DPP3Q9NY33 737 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms