RNA–Protein interactions for RNA: ENST00000396551.7

TRIM39-205, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,249 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-205ENST00000396551 CALCOCO2Q13137 446 aa17.58■□□□□ 0.41
TRIM39-205ENST00000396551 ATP13A4Q4VNC1 1196 aa17.58■□□□□ 0.41
TRIM39-205ENST00000396551 MPZL3Q6UWV2 235 aa17.58■□□□□ 0.41
TRIM39-205ENST00000396551 TSHZ1Q6ZSZ6 1077 aa17.58■□□□□ 0.41
TRIM39-205ENST00000396551 CCDC25Q86WR0 208 aa17.58■□□□□ 0.41
TRIM39-205ENST00000396551 CDCA5Q96FF9 252 aa17.58■□□□□ 0.41
TRIM39-205ENST00000396551 NLRP4Q96MN2 994 aa17.58■□□□□ 0.41
TRIM39-205ENST00000396551 XYLT2Q9H1B5 865 aa17.58■□□□□ 0.41
TRIM39-205ENST00000396551 C2orf40Q9H1Z8 148 aa17.58■□□□□ 0.41
TRIM39-205ENST00000396551 FZD8Q9H461 694 aa17.58■□□□□ 0.41
TRIM39-205ENST00000396551 MINDY3Q9H8M7 445 aa17.58■□□□□ 0.41
TRIM39-205ENST00000396551 NEU2Q9Y3R4 380 aa17.58■□□□□ 0.41
TRIM39-205ENST00000396551 TLDC2A0PJX2 215 aa17.58■□□□□ 0.4
TRIM39-205ENST00000396551 PAEPP09466 180 aa17.58■□□□□ 0.4
TRIM39-205ENST00000396551 WEE2P0C1S8 567 aa17.58■□□□□ 0.4
TRIM39-205ENST00000396551 MAN1A1P33908 653 aa17.58■□□□□ 0.4
TRIM39-205ENST00000396551 OSTNP61366 133 aa17.58■□□□□ 0.4
TRIM39-205ENST00000396551 TFAMQ00059 246 aaKnown RBP17.58■□□□□ 0.4
TRIM39-205ENST00000396551 BYSLQ13895 437 aaKnown RBP17.58■□□□□ 0.4
TRIM39-205ENST00000396551 SCARA5Q6ZMJ2 495 aa17.58■□□□□ 0.4
TRIM39-205ENST00000396551 TMEM130Q8N3G9 435 aa17.58■□□□□ 0.4
TRIM39-205ENST00000396551 WDTC1Q8N5D0 677 aa17.58■□□□□ 0.4
TRIM39-205ENST00000396551 EPS8L3Q8TE67 593 aaKnown RBP17.58■□□□□ 0.4
TRIM39-205ENST00000396551 TFAP2BQ92481 460 aa17.58■□□□□ 0.4
TRIM39-205ENST00000396551 OSBPL8Q9BZF1 889 aa17.58■□□□□ 0.4
TRIM39-205ENST00000396551 TMEM191CA6NGB0 347 aa17.57■□□□□ 0.4
TRIM39-205ENST00000396551 SMIM23A6NLE4 172 aa17.57■□□□□ 0.4
TRIM39-205ENST00000396551 TMEM191BP0C7N4 346 aa17.57■□□□□ 0.4
TRIM39-205ENST00000396551 ASPAP45381 313 aa17.57■□□□□ 0.4
TRIM39-205ENST00000396551 CLCN3P51790 818 aa17.57■□□□□ 0.4
TRIM39-205ENST00000396551 KCTD2Q14681 263 aa17.57■□□□□ 0.4
TRIM39-205ENST00000396551 SGSM1Q2NKQ1 1148 aa17.57■□□□□ 0.4
TRIM39-205ENST00000396551 ATF7IP2Q5U623 682 aa17.57■□□□□ 0.4
TRIM39-205ENST00000396551 GPAT2Q6NUI2 795 aa17.57■□□□□ 0.4
TRIM39-205ENST00000396551 TMEM192Q8IY95 271 aa17.57■□□□□ 0.4
TRIM39-205ENST00000396551 MDM1Q8TC05 714 aa17.57■□□□□ 0.4
TRIM39-205ENST00000396551 MPHOSPH6Q99547 160 aaKnown RBP17.57■□□□□ 0.4
TRIM39-205ENST00000396551 TMEM109Q9BVC6 243 aa17.57■□□□□ 0.4
TRIM39-205ENST00000396551 CDC42EP4Q9H3Q1 356 aaKnown RBP17.57■□□□□ 0.4
TRIM39-205ENST00000396551 KLHL11Q9NVR0 708 aa17.57■□□□□ 0.4
TRIM39-205ENST00000396551 ACKR2O00590 384 aa17.57■□□□□ 0.4
TRIM39-205ENST00000396551 TRAPPC3O43617 180 aa17.57■□□□□ 0.4
TRIM39-205ENST00000396551 FAM107AO95990 144 aa17.57■□□□□ 0.4
TRIM39-205ENST00000396551 IFI35P80217 286 aaPredicted RBP17.57■□□□□ 0.4
TRIM39-205ENST00000396551 OGDHQ02218 1023 aa17.57■□□□□ 0.4
TRIM39-205ENST00000396551 ADCY2Q08462 1091 aa17.57■□□□□ 0.4
TRIM39-205ENST00000396551 PPIL2Q13356 520 aa17.57■□□□□ 0.4
TRIM39-205ENST00000396551 PPP1R2P3Q6NXS1 205 aa17.57■□□□□ 0.4
TRIM39-205ENST00000396551 EXD1Q8NHP7 514 aa17.57■□□□□ 0.4
TRIM39-205ENST00000396551 RAPGEF5Q92565 580 aa17.57■□□□□ 0.4
TRIM39-205ENST00000396551 SNF8Q96H20 258 aa17.57■□□□□ 0.4
TRIM39-205ENST00000396551 DDX23Q9BUQ8 820 aaKnown RBP17.57■□□□□ 0.4
TRIM39-205ENST00000396551 IQCF3P0C7M6 154 aa17.57■□□□□ 0.4
TRIM39-205ENST00000396551 SURF1Q15526 300 aa17.57■□□□□ 0.4
TRIM39-205ENST00000396551 SYDE1Q6ZW31 735 aaPredicted RBP17.57■□□□□ 0.4
TRIM39-205ENST00000396551 ATL2Q8NHH9 583 aa17.57■□□□□ 0.4
TRIM39-205ENST00000396551 ADAM7Q9H2U9 754 aa17.57■□□□□ 0.4
TRIM39-205ENST00000396551 RNF181Q9P0P0 153 aa17.57■□□□□ 0.4
TRIM39-205ENST00000396551 IP6K2Q9UHH9 426 aa17.57■□□□□ 0.4
TRIM39-205ENST00000396551 ZSWIM8A7E2V4 1837 aa17.56■□□□□ 0.4
TRIM39-205ENST00000396551 INO80B-WBP1J3KQ70 363 aa17.56■□□□□ 0.4
TRIM39-205ENST00000396551 TXNP10599 105 aaKnown RBP17.56■□□□□ 0.4
TRIM39-205ENST00000396551 ITIH2P19823 946 aa17.56■□□□□ 0.4
TRIM39-205ENST00000396551 SSR1P43307 286 aaKnown RBP17.56■□□□□ 0.4
TRIM39-205ENST00000396551 ITGA8P53708 1063 aa17.56■□□□□ 0.4
TRIM39-205ENST00000396551 MBTD1Q05BQ5 628 aa17.56■□□□□ 0.4
TRIM39-205ENST00000396551 TRPC3Q13507 836 aa17.56■□□□□ 0.4
TRIM39-205ENST00000396551 EFCAB12Q6NXP0 572 aa17.56■□□□□ 0.4
TRIM39-205ENST00000396551 GRK7Q8WTQ7 553 aa17.56■□□□□ 0.4
TRIM39-205ENST00000396551 OPTNQ96CV9 577 aa17.56■□□□□ 0.4
TRIM39-205ENST00000396551 CCDC114Q96M63 670 aa17.56■□□□□ 0.4
TRIM39-205ENST00000396551 INO80BQ9C086 356 aaPredicted RBP17.56■□□□□ 0.4
TRIM39-205ENST00000396551 POLIQ9UNA4 740 aa17.56■□□□□ 0.4
TRIM39-205ENST00000396551 CCNG2Q16589 344 aa17.56■□□□□ 0.4
TRIM39-205ENST00000396551 ZNF699Q32M78 642 aa17.56■□□□□ 0.4
TRIM39-205ENST00000396551 WDR78Q5VTH9 848 aa17.56■□□□□ 0.4
TRIM39-205ENST00000396551 EXOC8Q8IYI6 725 aa17.56■□□□□ 0.4
TRIM39-205ENST00000396551 MCEEQ96PE7 176 aa17.56■□□□□ 0.4
TRIM39-205ENST00000396551 CDT1Q9H211 546 aa17.56■□□□□ 0.4
TRIM39-205ENST00000396551 RNPEPQ9H4A4 650 aa17.56■□□□□ 0.4
TRIM39-205ENST00000396551 GMNCA6NCL1 334 aa17.55■□□□□ 0.4
TRIM39-205ENST00000396551 PI4K2BG5E9Z4 385 aa17.55■□□□□ 0.4
TRIM39-205ENST00000396551 LSM8O95777 96 aaKnown RBP17.55■□□□□ 0.4
TRIM39-205ENST00000396551 TTLL12Q14166 644 aaPredicted RBP17.55■□□□□ 0.4
TRIM39-205ENST00000396551 PPP1R15BQ5SWA1 713 aa17.55■□□□□ 0.4
TRIM39-205ENST00000396551 FAM107BQ9H098 131 aa17.55■□□□□ 0.4
TRIM39-205ENST00000396551 SMARCAD1Q9H4L7 1026 aa17.55■□□□□ 0.4
TRIM39-205ENST00000396551 B4GALT4O60513 344 aa17.55■□□□□ 0.4
TRIM39-205ENST00000396551 CALB1P05937 261 aa17.55■□□□□ 0.4
TRIM39-205ENST00000396551 CDH5P33151 784 aaPredicted RBP17.55■□□□□ 0.4
TRIM39-205ENST00000396551 SLCO1A2P46721 670 aa17.55■□□□□ 0.4
TRIM39-205ENST00000396551 TNFAIP8L3Q5GJ75 292 aa17.55■□□□□ 0.4
TRIM39-205ENST00000396551 B4GALNT4Q76KP1 1039 aa17.55■□□□□ 0.4
TRIM39-205ENST00000396551 F8VP50 259 aa17.55■□□□□ 0.4
TRIM39-205ENST00000396551 RGS16O15492 202 aaPredicted RBP17.55■□□□□ 0.4
TRIM39-205ENST00000396551 MEFVO15553 781 aaPredicted RBP17.55■□□□□ 0.4
TRIM39-205ENST00000396551 HBP1O60381 514 aa17.55■□□□□ 0.4
TRIM39-205ENST00000396551 GAS8O95995 478 aa17.55■□□□□ 0.4
TRIM39-205ENST00000396551 CXCL8P10145 99 aa17.55■□□□□ 0.4
TRIM39-205ENST00000396551 VPS41P49754 854 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms