RNA–Protein interactions for RNA: ENST00000396364.7

FXN-202, Transcript of frataxin, humanhuman

TSL 5 BASIC

Gene FXN, Length 980 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-202ENST00000396364 TPM3P06753 285 aa22.86■■□□□ 1.25
FXN-202ENST00000396364 COPB1P53618 953 aaKnown RBP22.86■■□□□ 1.25
FXN-202ENST00000396364 DSG1Q02413 1049 aa22.86■■□□□ 1.25
FXN-202ENST00000396364 EXOC3L4Q17RC7 722 aa22.86■■□□□ 1.25
FXN-202ENST00000396364 CD300LGQ6UXG3 332 aa22.86■■□□□ 1.25
FXN-202ENST00000396364 THEM5Q8N1Q8 247 aa22.86■■□□□ 1.25
FXN-202ENST00000396364 TTC39CQ8N584 583 aa22.86■■□□□ 1.25
FXN-202ENST00000396364 NT5C1BQ96P26 610 aa22.86■■□□□ 1.25
FXN-202ENST00000396364 EMILIN2Q9BXX0 1053 aa22.86■■□□□ 1.25
FXN-202ENST00000396364 XYLT2Q9H1B5 865 aa22.86■■□□□ 1.25
FXN-202ENST00000396364 PRDM12Q9H4Q4 367 aa22.86■■□□□ 1.25
FXN-202ENST00000396364 GCNT4Q9P109 453 aa22.86■■□□□ 1.25
FXN-202ENST00000396364 FSD2A1L4K1 749 aa22.85■■□□□ 1.25
FXN-202ENST00000396364 I3L4J1 428 aa22.85■■□□□ 1.25
FXN-202ENST00000396364 SPTLC1O15269 473 aa22.85■■□□□ 1.25
FXN-202ENST00000396364 CYP11A1P05108 521 aa22.85■■□□□ 1.25
FXN-202ENST00000396364 OVOS1Q6IE37 1185 aa22.85■■□□□ 1.25
FXN-202ENST00000396364 ZNF280DQ6N043 979 aa22.85■■□□□ 1.25
FXN-202ENST00000396364 RNF214Q8ND24 703 aa22.85■■□□□ 1.25
FXN-202ENST00000396364 RIN2Q8WYP3 895 aaPredicted RBP22.85■■□□□ 1.25
FXN-202ENST00000396364 PIK3R5Q8WYR1 880 aa22.85■■□□□ 1.25
FXN-202ENST00000396364 NIF3L1Q9GZT8 377 aa22.85■■□□□ 1.25
FXN-202ENST00000396364 HSD3B7Q9H2F3 369 aa22.85■■□□□ 1.25
FXN-202ENST00000396364 FAM124BQ9H5Z6 455 aaPredicted RBP22.85■■□□□ 1.25
FXN-202ENST00000396364 IRAK3Q9Y616 596 aa22.85■■□□□ 1.25
FXN-202ENST00000396364 CXCL14O95715 111 aa22.84■■□□□ 1.25
FXN-202ENST00000396364 ATP1A3P13637 1013 aa22.84■■□□□ 1.25
FXN-202ENST00000396364 TBXAS1P24557 533 aaPredicted RBP22.84■■□□□ 1.25
FXN-202ENST00000396364 TKTP29401 623 aaKnown RBP22.84■■□□□ 1.25
FXN-202ENST00000396364 LHX1P48742 406 aa22.84■■□□□ 1.25
FXN-202ENST00000396364 YWHAEP62258 255 aaKnown RBP22.84■■□□□ 1.25
FXN-202ENST00000396364 GRIN2CQ14957 1233 aa22.84■■□□□ 1.25
FXN-202ENST00000396364 PSMD5Q16401 504 aa22.84■■□□□ 1.25
FXN-202ENST00000396364 MIIPQ5JXC2 388 aa22.84■■□□□ 1.25
FXN-202ENST00000396364 TMEM130Q8N3G9 435 aa22.84■■□□□ 1.25
FXN-202ENST00000396364 EHBP1Q8NDI1 1231 aa22.84■■□□□ 1.25
FXN-202ENST00000396364 VN1R3Q9BXE9 311 aa22.84■■□□□ 1.25
FXN-202ENST00000396364 CYP3A43Q9HB55 503 aa22.84■■□□□ 1.25
FXN-202ENST00000396364 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP22.83■■□□□ 1.25
FXN-202ENST00000396364 EPOPA6NHQ4 379 aa22.83■■□□□ 1.25
FXN-202ENST00000396364 LGALS16A8MUM7 142 aa22.83■■□□□ 1.25
FXN-202ENST00000396364 C2CD2LO14523 706 aa22.83■■□□□ 1.25
FXN-202ENST00000396364 FXR1P51114 621 aaKnown RBP eCLIP22.83■■□□□ 1.25
FXN-202ENST00000396364 VARS2Q5ST30 1063 aaKnown RBP22.83■■□□□ 1.25
FXN-202ENST00000396364 KIAA0319Q5VV43 1072 aa22.83■■□□□ 1.25
FXN-202ENST00000396364 PLPP4Q5VZY2 271 aa22.83■■□□□ 1.25
FXN-202ENST00000396364 ADGRF2Q8IZF7 708 aa22.83■■□□□ 1.25
FXN-202ENST00000396364 DEFB123Q8N688 67 aa22.83■■□□□ 1.25
FXN-202ENST00000396364 MRPL43Q8N983 215 aaKnown RBP22.83■■□□□ 1.25
FXN-202ENST00000396364 SEMA4DQ92854 862 aa22.83■■□□□ 1.25
FXN-202ENST00000396364 FAM161BQ96MY7 647 aa22.83■■□□□ 1.25
FXN-202ENST00000396364 PI4K2AQ9BTU6 479 aa22.83■■□□□ 1.25
FXN-202ENST00000396364 SNX25Q9H3E2 840 aa22.83■■□□□ 1.25
FXN-202ENST00000396364 RFXAPO00287 272 aa22.82■■□□□ 1.24
FXN-202ENST00000396364 FSCN2O14926 492 aa22.82■■□□□ 1.24
FXN-202ENST00000396364 TACC1O75410 805 aa22.82■■□□□ 1.24
FXN-202ENST00000396364 OAZ2O95190 189 aa22.82■■□□□ 1.24
FXN-202ENST00000396364 ADH1AP07327 375 aa22.82■■□□□ 1.24
FXN-202ENST00000396364 ERVFC1P60507 584 aa22.82■■□□□ 1.24
FXN-202ENST00000396364 UBXN1Q04323 297 aa22.82■■□□□ 1.24
FXN-202ENST00000396364 PTPN14Q15678 1187 aa22.82■■□□□ 1.24
FXN-202ENST00000396364 RTP2Q5QGT7 225 aa22.82■■□□□ 1.24
FXN-202ENST00000396364 TAS1R1Q7RTX1 841 aa22.82■■□□□ 1.24
FXN-202ENST00000396364 INTS2Q9H0H0 1204 aaKnown RBP22.82■■□□□ 1.24
FXN-202ENST00000396364 FNIP2Q9P278 1114 aa22.82■■□□□ 1.24
FXN-202ENST00000396364 BACE2Q9Y5Z0 518 aa22.82■■□□□ 1.24
FXN-202ENST00000396364 OR6C75A6NL08 312 aa22.81■■□□□ 1.24
FXN-202ENST00000396364 CBFA2T2O43439 604 aa22.81■■□□□ 1.24
FXN-202ENST00000396364 POU3F3P20264 500 aaPredicted RBP22.81■■□□□ 1.24
FXN-202ENST00000396364 IGFBP4P22692 258 aa22.81■■□□□ 1.24
FXN-202ENST00000396364 IGFBP6P24592 240 aaPredicted RBP22.81■■□□□ 1.24
FXN-202ENST00000396364 DNAJB1P25685 340 aa22.81■■□□□ 1.24
FXN-202ENST00000396364 PCSK1P29120 753 aa22.81■■□□□ 1.24
FXN-202ENST00000396364 CTXN3Q4LDR2 81 aa22.81■■□□□ 1.24
FXN-202ENST00000396364 WSCD1Q658N2 575 aa22.81■■□□□ 1.24
FXN-202ENST00000396364 TRIM65Q6PJ69 517 aa22.81■■□□□ 1.24
FXN-202ENST00000396364 ENOSF1Q7L5Y1 443 aa22.81■■□□□ 1.24
FXN-202ENST00000396364 PPFIBP1Q86W92 1011 aa22.81■■□□□ 1.24
FXN-202ENST00000396364 PDCL2Q8N4E4 241 aa22.81■■□□□ 1.24
FXN-202ENST00000396364 PCMTD1Q96MG8 357 aaPredicted RBP22.81■■□□□ 1.24
FXN-202ENST00000396364 CRACR2AQ9BSW2 395 aa22.81■■□□□ 1.24
FXN-202ENST00000396364 NSUN3Q9H649 340 aaKnown RBP22.81■■□□□ 1.24
FXN-202ENST00000396364 MTRRQ9UBK8 725 aa22.81■■□□□ 1.24
FXN-202ENST00000396364 L1RE1Q9UN81 338 aa22.81■■□□□ 1.24
FXN-202ENST00000396364 TIMM13Q9Y5L4 95 aaPredicted RBP22.81■■□□□ 1.24
FXN-202ENST00000396364 VWA8A3KMH1 1905 aa22.8■■□□□ 1.24
FXN-202ENST00000396364 MYO9BQ13459 2157 aa22.8■■□□□ 1.24
FXN-202ENST00000396364 CSPG5O95196 566 aa22.8■■□□□ 1.24
FXN-202ENST00000396364 RFX1P22670 979 aa22.8■■□□□ 1.24
FXN-202ENST00000396364 WARSP23381 471 aaKnown RBP22.8■■□□□ 1.24
FXN-202ENST00000396364 NDUFV1P49821 464 aa22.8■■□□□ 1.24
FXN-202ENST00000396364 FANCCQ00597 558 aa22.8■■□□□ 1.24
FXN-202ENST00000396364 SOWAHAQ2M3V2 549 aa22.8■■□□□ 1.24
FXN-202ENST00000396364 SPOPLQ6IQ16 392 aa22.8■■□□□ 1.24
FXN-202ENST00000396364 ELMSAN1Q6PJG2 1045 aa22.8■■□□□ 1.24
FXN-202ENST00000396364 PPM1KQ8N3J5 372 aa22.8■■□□□ 1.24
FXN-202ENST00000396364 LNX1Q8TBB1 728 aaPredicted RBP22.8■■□□□ 1.24
FXN-202ENST00000396364 B3GALT6Q96L58 329 aa22.8■■□□□ 1.24
FXN-202ENST00000396364 CDCA3Q99618 268 aaPredicted RBP22.8■■□□□ 1.24
FXN-202ENST00000396364 RXFP1Q9HBX9 757 aa22.8■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms