RNA–Protein interactions for RNA: ENST00000395969.6

VPS41-203, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5 BASIC

Gene VPS41, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-203ENST00000395969 CAPSQ13938 189 aa5.71□□□□□ -1.5
VPS41-203ENST00000395969 SPA17Q15506 151 aa5.71□□□□□ -1.5
VPS41-203ENST00000395969 TBC1D25Q3MII6 688 aa5.71□□□□□ -1.5
VPS41-203ENST00000395969 AGBL2Q5U5Z8 902 aa5.71□□□□□ -1.5
VPS41-203ENST00000395969 LRRC38Q5VT99 294 aa5.71□□□□□ -1.5
VPS41-203ENST00000395969 EGFLAMQ63HQ2 1017 aa5.71□□□□□ -1.5
VPS41-203ENST00000395969 MFN1Q8IWA4 741 aa5.71□□□□□ -1.5
VPS41-203ENST00000395969 LNX1Q8TBB1 728 aaPredicted RBP5.71□□□□□ -1.5
VPS41-203ENST00000395969 ASAP3Q8TDY4 903 aa5.71□□□□□ -1.5
VPS41-203ENST00000395969 RFFLQ8WZ73 363 aa5.71□□□□□ -1.5
VPS41-203ENST00000395969 RAPGEF5Q92565 580 aa5.71□□□□□ -1.5
VPS41-203ENST00000395969 CENPTQ96BT3 561 aa5.71□□□□□ -1.5
VPS41-203ENST00000395969 MAML3Q96JK9 1138 aa5.71□□□□□ -1.5
VPS41-203ENST00000395969 NOX5Q96PH1 765 aa5.71□□□□□ -1.5
VPS41-203ENST00000395969 PLIN2Q99541 437 aa5.71□□□□□ -1.5
VPS41-203ENST00000395969 IFIH1Q9BYX4 1025 aaKnown RBP5.71□□□□□ -1.5
VPS41-203ENST00000395969 HAPLN2Q9GZV7 340 aa5.71□□□□□ -1.5
VPS41-203ENST00000395969 ADAMTS10Q9H324 1103 aa5.71□□□□□ -1.5
VPS41-203ENST00000395969 CYP3A43Q9HB55 503 aa5.71□□□□□ -1.5
VPS41-203ENST00000395969 PRMT7Q9NVM4 692 aaPredicted RBP5.71□□□□□ -1.5
VPS41-203ENST00000395969 NOP53Q9NZM5 478 aaKnown RBP5.71□□□□□ -1.5
VPS41-203ENST00000395969 GCNT4Q9P109 453 aa5.71□□□□□ -1.5
VPS41-203ENST00000395969 BAIAP2L1Q9UHR4 511 aa5.71□□□□□ -1.5
VPS41-203ENST00000395969 AJAP1Q9UKB5 411 aaPredicted RBP5.71□□□□□ -1.5
VPS41-203ENST00000395969 CTDP1Q9Y5B0 961 aaPredicted RBP5.71□□□□□ -1.5
VPS41-203ENST00000395969 CCDC188H7C350 402 aa5.71□□□□□ -1.5
VPS41-203ENST00000395969 COBLO75128 1261 aa5.71□□□□□ -1.5
VPS41-203ENST00000395969 HEXIM1O94992 359 aaKnown RBP5.71□□□□□ -1.5
VPS41-203ENST00000395969 ARIH2O95376 493 aa5.71□□□□□ -1.5
VPS41-203ENST00000395969 ZNF865P0CJ78 1059 aaPredicted RBP5.71□□□□□ -1.5
VPS41-203ENST00000395969 TAL1P17542 331 aaPredicted RBP5.71□□□□□ -1.5
VPS41-203ENST00000395969 ECHS1P30084 290 aa5.71□□□□□ -1.5
VPS41-203ENST00000395969 CDR2Q01850 454 aa5.71□□□□□ -1.5
VPS41-203ENST00000395969 CYP4A11Q02928 519 aa5.71□□□□□ -1.5
VPS41-203ENST00000395969 TAP1Q03518 808 aa5.71□□□□□ -1.5
VPS41-203ENST00000395969 MAPK6Q16659 721 aa5.71□□□□□ -1.5
VPS41-203ENST00000395969 Q3C1V9 767 aa5.71□□□□□ -1.5
VPS41-203ENST00000395969 ZC2HC1CQ53FD0 456 aaPredicted RBP5.71□□□□□ -1.5
VPS41-203ENST00000395969 XKR9Q5GH70 373 aa5.71□□□□□ -1.5
VPS41-203ENST00000395969 MFSD4BQ5TF39 518 aa5.71□□□□□ -1.5
VPS41-203ENST00000395969 GKAP1Q5VSY0 366 aaPredicted RBP5.71□□□□□ -1.5
VPS41-203ENST00000395969 CWF19L1Q69YN2 538 aaKnown RBP5.71□□□□□ -1.5
VPS41-203ENST00000395969 HIBCHQ6NVY1 386 aaPredicted RBP5.71□□□□□ -1.5
VPS41-203ENST00000395969 MAEAQ7L5Y9 396 aa5.71□□□□□ -1.5
VPS41-203ENST00000395969 VPS36Q86VN1 386 aa5.71□□□□□ -1.5
VPS41-203ENST00000395969 RELL1Q8IUW5 271 aa5.71□□□□□ -1.5
VPS41-203ENST00000395969 SCML4Q8N228 414 aa5.71□□□□□ -1.5
VPS41-203ENST00000395969 FBXL13Q8NEE6 735 aa5.71□□□□□ -1.5
VPS41-203ENST00000395969 TPCN2Q8NHX9 752 aa5.71□□□□□ -1.5
VPS41-203ENST00000395969 SMCR8Q8TEV9 937 aaPredicted RBP5.71□□□□□ -1.5
VPS41-203ENST00000395969 FNIP1Q8TF40 1166 aa5.71□□□□□ -1.5
VPS41-203ENST00000395969 CASKIN2Q8WXE0 1202 aa5.71□□□□□ -1.5
VPS41-203ENST00000395969 ALS2CR12Q96Q35 445 aa5.71□□□□□ -1.5
VPS41-203ENST00000395969 MRPL4Q9BYD3 311 aaKnown RBP5.71□□□□□ -1.5
VPS41-203ENST00000395969 FRMD8P1Q9BZ68 369 aaPredicted RBP5.71□□□□□ -1.5
VPS41-203ENST00000395969 POLR3FQ9H1D9 316 aaPredicted RBP5.71□□□□□ -1.5
VPS41-203ENST00000395969 CARD9Q9H257 536 aa5.71□□□□□ -1.5
VPS41-203ENST00000395969 GBA2Q9HCG7 927 aaPredicted RBP5.71□□□□□ -1.5
VPS41-203ENST00000395969 EPB41L5Q9HCM4 733 aa5.71□□□□□ -1.5
VPS41-203ENST00000395969 SMARCAL1Q9NZC9 954 aa5.71□□□□□ -1.5
VPS41-203ENST00000395969 EHD2Q9NZN4 543 aa5.71□□□□□ -1.5
VPS41-203ENST00000395969 CNOT8Q9UFF9 292 aaKnown RBP5.71□□□□□ -1.5
VPS41-203ENST00000395969 TMA7Q9Y2S6 64 aaKnown RBP5.71□□□□□ -1.5
VPS41-203ENST00000395969 CITO14578 2027 aa5.7□□□□□ -1.5
VPS41-203ENST00000395969 GRXCR2A6NFK2 248 aa5.7□□□□□ -1.5
VPS41-203ENST00000395969 TTC36A6NLP5 189 aa5.7□□□□□ -1.5
VPS41-203ENST00000395969 ANKRD63C9JTQ0 380 aa5.7□□□□□ -1.5
VPS41-203ENST00000395969 ZBTB39O15060 712 aa5.7□□□□□ -1.5
VPS41-203ENST00000395969 ASS1P00966 412 aaKnown RBP5.7□□□□□ -1.5
VPS41-203ENST00000395969 SLC9A1P19634 815 aa5.7□□□□□ -1.5
VPS41-203ENST00000395969 GBP1P32455 592 aa5.7□□□□□ -1.5
VPS41-203ENST00000395969 SLC1A1P43005 524 aa5.7□□□□□ -1.5
VPS41-203ENST00000395969 PAFAH1B1P43034 410 aa5.7□□□□□ -1.5
VPS41-203ENST00000395969 PPP2R2AP63151 447 aa5.7□□□□□ -1.5
VPS41-203ENST00000395969 DGKZQ13574 1117 aa5.7□□□□□ -1.5
VPS41-203ENST00000395969 ITIH4Q14624 930 aa5.7□□□□□ -1.5
VPS41-203ENST00000395969 KCTD2Q14681 263 aa5.7□□□□□ -1.5
VPS41-203ENST00000395969 ACAP1Q15027 740 aa5.7□□□□□ -1.5
VPS41-203ENST00000395969 KCTD19Q17RG1 926 aaPredicted RBP5.7□□□□□ -1.5
VPS41-203ENST00000395969 CCDC142Q17RM4 750 aa5.7□□□□□ -1.5
VPS41-203ENST00000395969 DCAF4L1Q3SXM0 396 aa5.7□□□□□ -1.5
VPS41-203ENST00000395969 ZNF568Q3ZCX4 644 aa5.7□□□□□ -1.5
VPS41-203ENST00000395969 PPP1R15BQ5SWA1 713 aa5.7□□□□□ -1.5
VPS41-203ENST00000395969 MARCH8Q5T0T0 291 aa5.7□□□□□ -1.5
VPS41-203ENST00000395969 SWSAP1Q6NVH7 229 aa5.7□□□□□ -1.5
VPS41-203ENST00000395969 DRICH1Q6PGQ1 229 aaPredicted RBP5.7□□□□□ -1.5
VPS41-203ENST00000395969 ARMCX2Q7L311 632 aa5.7□□□□□ -1.5
VPS41-203ENST00000395969 EPS8L1Q8TE68 723 aa5.7□□□□□ -1.5
VPS41-203ENST00000395969 AGAP11Q8TF27 550 aa5.7□□□□□ -1.5
VPS41-203ENST00000395969 STK32AQ8WU08 396 aa5.7□□□□□ -1.5
VPS41-203ENST00000395969 CLMNQ96JQ2 1002 aa5.7□□□□□ -1.5
VPS41-203ENST00000395969 CEP170P1Q96L14 293 aa5.7□□□□□ -1.5
VPS41-203ENST00000395969 KREMEN1Q96MU8 473 aa5.7□□□□□ -1.5
VPS41-203ENST00000395969 ANKRD27Q96NW4 1050 aa5.7□□□□□ -1.5
VPS41-203ENST00000395969 AGPAT1Q99943 283 aa5.7□□□□□ -1.5
VPS41-203ENST00000395969 ELP3Q9H9T3 547 aa5.7□□□□□ -1.5
VPS41-203ENST00000395969 IFT122Q9HBG6 1241 aa5.7□□□□□ -1.5
VPS41-203ENST00000395969 GTF3C4Q9UKN8 822 aa5.7□□□□□ -1.5
VPS41-203ENST00000395969 KIAA1257Q9ULG3 409 aa5.7□□□□□ -1.5
VPS41-203ENST00000395969 MAPK8IP1Q9UQF2 711 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms