RNA–Protein interactions for RNA: ENST00000395896.8

VPS13C-203, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 14,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-203ENST00000395896 TPCN2Q8NHX9 752 aa3.57□□□□□ -1.84
VPS13C-203ENST00000395896 SAAL1Q96ER3 474 aa3.57□□□□□ -1.84
VPS13C-203ENST00000395896 SGSM3Q96HU1 749 aa3.57□□□□□ -1.84
VPS13C-203ENST00000395896 P2RX7Q99572 595 aaKnown RBP3.57□□□□□ -1.84
VPS13C-203ENST00000395896 ROPN1BQ9BZX4 212 aaPredicted RBP3.57□□□□□ -1.84
VPS13C-203ENST00000395896 FBXO44Q9H4M3 255 aa3.57□□□□□ -1.84
VPS13C-203ENST00000395896 ROPN1Q9HAT0 212 aaPredicted RBP3.57□□□□□ -1.84
VPS13C-203ENST00000395896 VPS9D1Q9Y2B5 631 aa3.57□□□□□ -1.84
VPS13C-203ENST00000395896 USTQ9Y2C2 406 aa3.57□□□□□ -1.84
VPS13C-203ENST00000395896 A8MXQ7 604 aa3.57□□□□□ -1.84
VPS13C-203ENST00000395896 DUSP11O75319 330 aaKnown RBP3.57□□□□□ -1.84
VPS13C-203ENST00000395896 FARP2O94887 1054 aaPredicted RBP3.57□□□□□ -1.84
VPS13C-203ENST00000395896 ERBB2P04626 1255 aa3.57□□□□□ -1.84
VPS13C-203ENST00000395896 GARSP41250 739 aaKnown RBP3.57□□□□□ -1.84
VPS13C-203ENST00000395896 IRX4P78413 519 aa3.57□□□□□ -1.84
VPS13C-203ENST00000395896 MAPK7Q13164 816 aa3.57□□□□□ -1.84
VPS13C-203ENST00000395896 SNX17Q15036 470 aa3.57□□□□□ -1.84
VPS13C-203ENST00000395896 FAM102AQ5T9C2 384 aaPredicted RBP3.57□□□□□ -1.84
VPS13C-203ENST00000395896 DHX30Q7L2E3 1194 aaKnown RBP eCLIP3.57□□□□□ -1.84
VPS13C-203ENST00000395896 CRYGNQ8WXF5 182 aa3.57□□□□□ -1.84
VPS13C-203ENST00000395896 TBRG4Q969Z0 631 aaKnown RBP eCLIP3.57□□□□□ -1.844e-6■■■■■ 41.2
VPS13C-203ENST00000395896 CGRRF1Q99675 332 aa3.57□□□□□ -1.84
VPS13C-203ENST00000395896 CDKN2AIPQ9NXV6 580 aaPredicted RBP3.57□□□□□ -1.84
VPS13C-203ENST00000395896 BFARQ9NZS9 450 aa3.57□□□□□ -1.84
VPS13C-203ENST00000395896 COMMD10Q9Y6G5 202 aa3.57□□□□□ -1.84
VPS13C-203ENST00000395896 USH1CQ9Y6N9 552 aa3.57□□□□□ -1.84
VPS13C-203ENST00000395896 ARID1BQ8NFD5 2236 aaPredicted RBP3.57□□□□□ -1.84
VPS13C-203ENST00000395896 BDP1A6H8Y1 2624 aa3.57□□□□□ -1.84
VPS13C-203ENST00000395896 PHF20L1A8MW92 1017 aa3.57□□□□□ -1.84
VPS13C-203ENST00000395896 ASS1P00966 412 aaKnown RBP3.57□□□□□ -1.84
VPS13C-203ENST00000395896 CBX1P83916 185 aa3.57□□□□□ -1.84
VPS13C-203ENST00000395896 STAT4Q14765 748 aa3.57□□□□□ -1.84
VPS13C-203ENST00000395896 POTEAQ6S8J7 498 aa3.57□□□□□ -1.84
VPS13C-203ENST00000395896 ZFPM1Q8IX07 1006 aa3.57□□□□□ -1.84
VPS13C-203ENST00000395896 SLC35G2Q8TBE7 412 aa3.57□□□□□ -1.84
VPS13C-203ENST00000395896 GCNAQ96QF7 691 aa3.57□□□□□ -1.84
VPS13C-203ENST00000395896 RBAK-RBAKDNI3L0D1 243 aa3.57□□□□□ -1.84
VPS13C-203ENST00000395896 HSPA8P11142 646 aaKnown RBP3.57□□□□□ -1.84
VPS13C-203ENST00000395896 INSRRP14616 1297 aa3.57□□□□□ -1.84
VPS13C-203ENST00000395896 RPL9P32969 192 aaKnown RBP3.57□□□□□ -1.84
VPS13C-203ENST00000395896 ACAD10Q6JQN1 1059 aa3.57□□□□□ -1.84
VPS13C-203ENST00000395896 VSIG1Q86XK7 387 aa3.57□□□□□ -1.84
VPS13C-203ENST00000395896 EMID1Q96A84 441 aaPredicted RBP3.57□□□□□ -1.84
VPS13C-203ENST00000395896 TMEM143Q96AN5 459 aa3.57□□□□□ -1.84
VPS13C-203ENST00000395896 INTS13Q9NVM9 706 aa3.57□□□□□ -1.84
VPS13C-203ENST00000395896 ASTN2O75129 1339 aaPredicted RBP3.57□□□□□ -1.84
VPS13C-203ENST00000395896 SHROOM3Q8TF72 1996 aa3.57□□□□□ -1.84
VPS13C-203ENST00000395896 PIEZO1Q92508 2521 aa3.57□□□□□ -1.84
VPS13C-203ENST00000395896 TMEM110-MUSTN1A8MSY1 372 aa3.57□□□□□ -1.84
VPS13C-203ENST00000395896 UBE2Q2LH0YL09 131 aa3.57□□□□□ -1.84
VPS13C-203ENST00000395896 PIGRP01833 764 aa3.57□□□□□ -1.84
VPS13C-203ENST00000395896 PNMA6AP0CW24 399 aaPredicted RBP3.57□□□□□ -1.84
VPS13C-203ENST00000395896 TROVE2P10155 538 aaKnown RBP eCLIP3.57□□□□□ -1.84
VPS13C-203ENST00000395896 MYBP10242 640 aa3.57□□□□□ -1.84
VPS13C-203ENST00000395896 MYL6P60660 151 aa3.57□□□□□ -1.84
VPS13C-203ENST00000395896 RGMBQ6NW40 437 aa3.57□□□□□ -1.84
VPS13C-203ENST00000395896 STKLD1Q8NE28 680 aa3.57□□□□□ -1.84
VPS13C-203ENST00000395896 SNF8Q96H20 258 aa3.57□□□□□ -1.84
VPS13C-203ENST00000395896 PI4KAP42356 2102 aa3.57□□□□□ -1.84
VPS13C-203ENST00000395896 DCDC2CA8MYV0 355 aa3.57□□□□□ -1.84
VPS13C-203ENST00000395896 RASGRF2O14827 1237 aa3.57□□□□□ -1.84
VPS13C-203ENST00000395896 ZBTB24O43167 697 aaPredicted RBP3.57□□□□□ -1.84
VPS13C-203ENST00000395896 PSMD3O43242 534 aa3.57□□□□□ -1.84
VPS13C-203ENST00000395896 APOEP02649 317 aa3.57□□□□□ -1.84
VPS13C-203ENST00000395896 GLI1P08151 1106 aa3.57□□□□□ -1.84
VPS13C-203ENST00000395896 CD58P19256 250 aa3.57□□□□□ -1.84
VPS13C-203ENST00000395896 FECHP22830 423 aa3.57□□□□□ -1.84
VPS13C-203ENST00000395896 HIF1AQ16665 826 aa3.57□□□□□ -1.84
VPS13C-203ENST00000395896 CASC4Q6P4E1 433 aa3.57□□□□□ -1.84
VPS13C-203ENST00000395896 SLC30A10Q6XR72 485 aa3.57□□□□□ -1.84
VPS13C-203ENST00000395896 CCDC121Q6ZUS5 278 aa3.57□□□□□ -1.84
VPS13C-203ENST00000395896 LRRC49Q8IUZ0 686 aa3.57□□□□□ -1.84
VPS13C-203ENST00000395896 VAT1Q99536 393 aa3.57□□□□□ -1.84
VPS13C-203ENST00000395896 CBWD1Q9BRT8 395 aa3.57□□□□□ -1.84
VPS13C-203ENST00000395896 XRN2Q9H0D6 950 aaKnown RBP eCLIP3.57□□□□□ -1.84
VPS13C-203ENST00000395896 DYNC1LI2O43237 492 aaPredicted RBP3.57□□□□□ -1.84
VPS13C-203ENST00000395896 VDRP11473 427 aa3.57□□□□□ -1.84
VPS13C-203ENST00000395896 KCNA2P16389 499 aa3.57□□□□□ -1.84
VPS13C-203ENST00000395896 STX2P32856 288 aa3.57□□□□□ -1.84
VPS13C-203ENST00000395896 MAP2K5Q13163 448 aa3.57□□□□□ -1.84
VPS13C-203ENST00000395896 ZNF268Q14587 947 aaPredicted RBP3.57□□□□□ -1.84
VPS13C-203ENST00000395896 ANO4Q32M45 955 aa3.57□□□□□ -1.84
VPS13C-203ENST00000395896 LZTR1Q8N653 840 aa3.57□□□□□ -1.84
VPS13C-203ENST00000395896 GSDMBQ8TAX9 411 aa3.57□□□□□ -1.84
VPS13C-203ENST00000395896 PYROXD1Q8WU10 500 aa3.57□□□□□ -1.84
VPS13C-203ENST00000395896 DUSP9Q99956 384 aaKnown RBP3.57□□□□□ -1.84
VPS13C-203ENST00000395896 A0A087WWV3 80 aa3.57□□□□□ -1.84
VPS13C-203ENST00000395896 EXOC1LA0A1B0GW35 172 aa3.57□□□□□ -1.84
VPS13C-203ENST00000395896 WTIPA6NIX2 430 aaPredicted RBP3.57□□□□□ -1.84
VPS13C-203ENST00000395896 SUN1O94901 812 aa3.57□□□□□ -1.84
VPS13C-203ENST00000395896 FAM200BP0CF97 657 aa3.57□□□□□ -1.84
VPS13C-203ENST00000395896 TLK2Q86UE8 772 aa3.57□□□□□ -1.84
VPS13C-203ENST00000395896 CDKL3Q8IVW4 592 aaPredicted RBP3.57□□□□□ -1.84
VPS13C-203ENST00000395896 ARHGEF26Q96DR7 871 aa3.57□□□□□ -1.84
VPS13C-203ENST00000395896 TMEM169Q96HH4 297 aa3.57□□□□□ -1.84
VPS13C-203ENST00000395896 C11orf70Q9BRQ4 267 aa3.57□□□□□ -1.84
VPS13C-203ENST00000395896 XAB2Q9HCS7 855 aaKnown RBP3.57□□□□□ -1.84
VPS13C-203ENST00000395896 NOL12Q9UGY1 213 aaKnown RBP eCLIP3.57□□□□□ -1.84
VPS13C-203ENST00000395896 SQORQ9Y6N5 450 aa3.57□□□□□ -1.84
VPS13C-203ENST00000395896 GRIN2DO15399 1336 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms