RNA–Protein interactions for RNA: ENST00000395198.7

HERC4-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERC4, Length 4,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-204ENST00000395198 ACAA2P42765 397 aaKnown RBP4.52□□□□□ -1.69
HERC4-204ENST00000395198 RECQLP46063 649 aaPredicted RBP4.52□□□□□ -1.69
HERC4-204ENST00000395198 RNF144AP50876 292 aaPredicted RBP4.52□□□□□ -1.69
HERC4-204ENST00000395198 CASP5P51878 434 aa4.52□□□□□ -1.69
HERC4-204ENST00000395198 VCPP55072 806 aaKnown RBP4.52□□□□□ -1.69
HERC4-204ENST00000395198 SCAND1P57086 179 aa4.52□□□□□ -1.69
HERC4-204ENST00000395198 NKX3-2P78367 333 aa4.52□□□□□ -1.69
HERC4-204ENST00000395198 KCNJ10P78508 379 aa4.52□□□□□ -1.69
HERC4-204ENST00000395198 HSPA14Q0VDF9 509 aa4.52□□□□□ -1.69
HERC4-204ENST00000395198 PTK2BQ14289 1009 aa4.52□□□□□ -1.69
HERC4-204ENST00000395198 DPYSL2Q16555 572 aa4.52□□□□□ -1.69
HERC4-204ENST00000395198 FLYWCH1Q4VC44 716 aa4.52□□□□□ -1.69
HERC4-204ENST00000395198 RANBP10Q6VN20 620 aa4.52□□□□□ -1.69
HERC4-204ENST00000395198 USP50Q70EL3 339 aaPredicted RBP4.52□□□□□ -1.69
HERC4-204ENST00000395198 FGD2Q7Z6J4 655 aa4.52□□□□□ -1.69
HERC4-204ENST00000395198 SULF1Q8IWU6 871 aa4.52□□□□□ -1.69
HERC4-204ENST00000395198 SFRP1Q8N474 314 aa4.52□□□□□ -1.69
HERC4-204ENST00000395198 PIGOQ8TEQ8 1089 aa4.52□□□□□ -1.69
HERC4-204ENST00000395198 TRIM4Q9C037 500 aa4.52□□□□□ -1.69
HERC4-204ENST00000395198 VPS16Q9H269 839 aa4.52□□□□□ -1.69
HERC4-204ENST00000395198 TRIM39Q9HCM9 518 aa4.52□□□□□ -1.69
HERC4-204ENST00000395198 OR6C2Q9NZP2 312 aa4.52□□□□□ -1.69
HERC4-204ENST00000395198 CABP1Q9NZU7 370 aa4.52□□□□□ -1.69
HERC4-204ENST00000395198 GIT1Q9Y2X7 761 aa4.52□□□□□ -1.69
HERC4-204ENST00000395198 SAMD9Q5K651 1589 aa4.52□□□□□ -1.69
HERC4-204ENST00000395198 C15orf38-AP3S2A0A0A6YYH1 394 aa4.52□□□□□ -1.69
HERC4-204ENST00000395198 A0A0U1RQK1 487 aa4.52□□□□□ -1.69
HERC4-204ENST00000395198 ZNF320A2RRD8 509 aa4.52□□□□□ -1.69
HERC4-204ENST00000395198 STX16-NPEPL1H3BU86 382 aa4.52□□□□□ -1.69
HERC4-204ENST00000395198 K7ESF4 209 aa4.52□□□□□ -1.69
HERC4-204ENST00000395198 RAG1P15918 1043 aa4.52□□□□□ -1.69
HERC4-204ENST00000395198 POU3F2P20265 443 aaPredicted RBP4.52□□□□□ -1.69
HERC4-204ENST00000395198 CRKLP46109 303 aaKnown RBP4.52□□□□□ -1.69
HERC4-204ENST00000395198 ARSDP51689 593 aa4.52□□□□□ -1.69
HERC4-204ENST00000395198 CUL4AQ13619 759 aa4.52□□□□□ -1.69
HERC4-204ENST00000395198 SGCAQ16586 387 aa4.52□□□□□ -1.69
HERC4-204ENST00000395198 INSCQ1MX18 579 aa4.52□□□□□ -1.69
HERC4-204ENST00000395198 PDPK2PQ6A1A2 396 aa4.52□□□□□ -1.69
HERC4-204ENST00000395198 C16orf59Q7L2K0 433 aa4.52□□□□□ -1.69
HERC4-204ENST00000395198 DNAJC10Q8IXB1 793 aa4.52□□□□□ -1.69
HERC4-204ENST00000395198 FBXW8Q8N3Y1 598 aa4.52□□□□□ -1.69
HERC4-204ENST00000395198 SMC1BQ8NDV3 1235 aa4.52□□□□□ -1.69
HERC4-204ENST00000395198 C3orf58Q8NDZ4 430 aa4.52□□□□□ -1.69
HERC4-204ENST00000395198 CCT7Q99832 543 aa4.52□□□□□ -1.69
HERC4-204ENST00000395198 FRMD8P1Q9BZ68 369 aaPredicted RBP4.52□□□□□ -1.69
HERC4-204ENST00000395198 UCK1Q9HA47 277 aa4.52□□□□□ -1.69
HERC4-204ENST00000395198 PCDH18Q9HCL0 1135 aa4.52□□□□□ -1.69
HERC4-204ENST00000395198 FARSBQ9NSD9 589 aaKnown RBP4.52□□□□□ -1.69
HERC4-204ENST00000395198 R3HDM2Q9Y2K5 976 aaKnown RBP4.52□□□□□ -1.69
HERC4-204ENST00000395198 CLDN16Q9Y5I7 305 aa4.52□□□□□ -1.69
HERC4-204ENST00000395198 TNPO3Q9Y5L0 923 aaKnown RBP4.52□□□□□ -1.69
HERC4-204ENST00000395198 BLACEA4D250 179 aa4.51□□□□□ -1.69
HERC4-204ENST00000395198 PSMD9O00233 223 aa4.51□□□□□ -1.69
HERC4-204ENST00000395198 DDAH1O94760 285 aa4.51□□□□□ -1.69
HERC4-204ENST00000395198 GSNP06396 782 aa4.51□□□□□ -1.69
HERC4-204ENST00000395198 S100A9P06702 114 aaKnown RBP4.51□□□□□ -1.69
HERC4-204ENST00000395198 TAP2Q03519 686 aa4.51□□□□□ -1.69
HERC4-204ENST00000395198 GALNT3Q14435 633 aa4.51□□□□□ -1.69
HERC4-204ENST00000395198 AANATQ16613 207 aa4.51□□□□□ -1.69
HERC4-204ENST00000395198 FAM187BQ17R55 369 aa4.51□□□□□ -1.69
HERC4-204ENST00000395198 CFAP100Q494V2 611 aa4.51□□□□□ -1.69
HERC4-204ENST00000395198 THAP5Q7Z6K1 395 aa4.51□□□□□ -1.69
HERC4-204ENST00000395198 ADGRA1Q86SQ6 560 aa4.51□□□□□ -1.69
HERC4-204ENST00000395198 ADGRG2Q8IZP9 1017 aa4.51□□□□□ -1.69
HERC4-204ENST00000395198 KIFAP3Q92845 792 aa4.51□□□□□ -1.69
HERC4-204ENST00000395198 ATP6V0A1Q93050 837 aa4.51□□□□□ -1.69
HERC4-204ENST00000395198 NSUN4Q96CB9 384 aaKnown RBP4.51□□□□□ -1.69
HERC4-204ENST00000395198 CAMK1GQ96NX5 476 aa4.51□□□□□ -1.69
HERC4-204ENST00000395198 PRAM1Q96QH2 718 aa4.51□□□□□ -1.69
HERC4-204ENST00000395198 ADPRHL2Q9NX46 363 aa4.51□□□□□ -1.69
HERC4-204ENST00000395198 ERVK-19Q9WJR5 959 aa4.51□□□□□ -1.69
HERC4-204ENST00000395198 ZSCAN5BA6NJL1 495 aa4.51□□□□□ -1.69
HERC4-204ENST00000395198 AGAP14A8MT82 685 aa4.51□□□□□ -1.69
HERC4-204ENST00000395198 DDX3XO00571 662 aaKnown RBP eCLIP4.51□□□□□ -1.69
HERC4-204ENST00000395198 GPRIN2O60269 458 aa4.51□□□□□ -1.69
HERC4-204ENST00000395198 TBX10O75333 385 aa4.51□□□□□ -1.69
HERC4-204ENST00000395198 REC8O95072 547 aa4.51□□□□□ -1.69
HERC4-204ENST00000395198 CSTBP04080 98 aaKnown RBP4.51□□□□□ -1.69
HERC4-204ENST00000395198 CYP1A1P04798 512 aaPredicted RBP4.51□□□□□ -1.69
HERC4-204ENST00000395198 CPA1P15085 419 aa4.51□□□□□ -1.69
HERC4-204ENST00000395198 CCNA2P20248 432 aa4.51□□□□□ -1.69
HERC4-204ENST00000395198 LSP1P33241 339 aa4.51□□□□□ -1.69
HERC4-204ENST00000395198 ADRA1BP35368 520 aa4.51□□□□□ -1.69
HERC4-204ENST00000395198 CETN2P41208 172 aa4.51□□□□□ -1.69
HERC4-204ENST00000395198 CEBPAP49715 358 aaPredicted RBP4.51□□□□□ -1.69
HERC4-204ENST00000395198 ATP1A2P50993 1020 aa4.51□□□□□ -1.69
HERC4-204ENST00000395198 AFF1P51825 1210 aaKnown RBP4.51□□□□□ -1.69
HERC4-204ENST00000395198 SEC24CP53992 1094 aa4.51□□□□□ -1.69
HERC4-204ENST00000395198 MFAP3P55082 362 aa4.51□□□□□ -1.69
HERC4-204ENST00000395198 NIPAL4Q0D2K0 466 aa4.51□□□□□ -1.69
HERC4-204ENST00000395198 SNAPC2Q13487 334 aa4.51□□□□□ -1.69
HERC4-204ENST00000395198 SMAD2Q15796 467 aaKnown RBP4.51□□□□□ -1.69
HERC4-204ENST00000395198 TAF12Q16514 161 aa4.51□□□□□ -1.69
HERC4-204ENST00000395198 PPP1R26Q5T8A7 1209 aaPredicted RBP4.51□□□□□ -1.69
HERC4-204ENST00000395198 RRAGBQ5VZM2 374 aa4.51□□□□□ -1.69
HERC4-204ENST00000395198 NXPE4Q6UWF7 544 aa4.51□□□□□ -1.69
HERC4-204ENST00000395198 GPR149Q86SP6 731 aa4.51□□□□□ -1.69
HERC4-204ENST00000395198 FAM124AQ86V42 546 aa4.51□□□□□ -1.69
HERC4-204ENST00000395198 TSPYL5Q86VY4 417 aaPredicted RBP4.51□□□□□ -1.69
HERC4-204ENST00000395198 UNC45BQ8IWX7 931 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms