RNA–Protein interactions for RNA: ENST00000395060.5

CLIP2-203, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP2, Length 3,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-203ENST00000395060 CFAP57Q96MR6 1250 aa15.12■□□□□ 0.01
CLIP2-203ENST00000395060 FAM213AQ9BRX8 229 aa15.12■□□□□ 0.01
CLIP2-203ENST00000395060 TEKT3Q9BXF9 490 aa15.12■□□□□ 0.01
CLIP2-203ENST00000395060 RAB20Q9NX57 234 aa15.12■□□□□ 0.01
CLIP2-203ENST00000395060 ZHX2Q9Y6X8 837 aa15.12■□□□□ 0.01
CLIP2-203ENST00000395060 SEC23IPQ9Y6Y8 1000 aaKnown RBP15.12■□□□□ 0.01
CLIP2-203ENST00000395060 HARSP12081 509 aaKnown RBP15.12■□□□□ 0.01
CLIP2-203ENST00000395060 KCNA3P22001 575 aa15.12■□□□□ 0.01
CLIP2-203ENST00000395060 RPL7AP62424 266 aaKnown RBP15.12■□□□□ 0.01
CLIP2-203ENST00000395060 THOC5Q13769 683 aaKnown RBP15.12■□□□□ 0.01
CLIP2-203ENST00000395060 SMAD1Q15797 465 aaKnown RBP15.12■□□□□ 0.01
CLIP2-203ENST00000395060 CLEC16AQ2KHT3 1053 aa15.12■□□□□ 0.01
CLIP2-203ENST00000395060 FYB2Q5VWT5 728 aa15.12■□□□□ 0.01
CLIP2-203ENST00000395060 KRT39Q6A163 491 aa15.12■□□□□ 0.01
CLIP2-203ENST00000395060 SV2AQ7L0J3 742 aa15.12■□□□□ 0.01
CLIP2-203ENST00000395060 TCP10LQ8TDR4 215 aa15.12■□□□□ 0.01
CLIP2-203ENST00000395060 KIFAP3Q92845 792 aa15.12■□□□□ 0.01
CLIP2-203ENST00000395060 GRAMD1AQ96CP6 724 aa15.12■□□□□ 0.01
CLIP2-203ENST00000395060 BICD1Q96G01 975 aa15.12■□□□□ 0.01
CLIP2-203ENST00000395060 SEL1LQ9UBV2 794 aa15.12■□□□□ 0.01
CLIP2-203ENST00000395060 ZNF831Q5JPB2 1677 aa15.12■□□□□ 0.01
CLIP2-203ENST00000395060 CCDC195A0A1B0GUA6 201 aa15.12■□□□□ 0.01
CLIP2-203ENST00000395060 CIITAP33076 1130 aa15.12■□□□□ 0.01
CLIP2-203ENST00000395060 AOC3Q16853 763 aa15.12■□□□□ 0.01
CLIP2-203ENST00000395060 SMTNL2Q2TAL5 461 aa15.12■□□□□ 0.01
CLIP2-203ENST00000395060 TCEAL9Q9UHQ7 104 aa15.12■□□□□ 0.01
CLIP2-203ENST00000395060 ATP8B3O60423 1300 aa15.12■□□□□ 0.01
CLIP2-203ENST00000395060 KLRG2A4D1S0 409 aaPredicted RBP15.11■□□□□ 0.01
CLIP2-203ENST00000395060 SMAPO00193 183 aa15.11■□□□□ 0.01
CLIP2-203ENST00000395060 GRIN3BO60391 1043 aa15.11■□□□□ 0.01
CLIP2-203ENST00000395060 TBX10O75333 385 aa15.11■□□□□ 0.01
CLIP2-203ENST00000395060 ETS2P15036 469 aa15.11■□□□□ 0.01
CLIP2-203ENST00000395060 DSG3P32926 999 aa15.11■□□□□ 0.01
CLIP2-203ENST00000395060 SERPINB4P48594 390 aa15.11■□□□□ 0.01
CLIP2-203ENST00000395060 NR1H3Q13133 447 aa15.11■□□□□ 0.01
CLIP2-203ENST00000395060 SLC15A2Q16348 729 aa15.11■□□□□ 0.01
CLIP2-203ENST00000395060 PDK4Q16654 411 aa15.11■□□□□ 0.01
CLIP2-203ENST00000395060 SEZ6Q53EL9 994 aa15.11■□□□□ 0.01
CLIP2-203ENST00000395060 SCARA3Q6AZY7 606 aa15.11■□□□□ 0.01
CLIP2-203ENST00000395060 C4orf50Q6ZRC1 276 aa15.11■□□□□ 0.01
CLIP2-203ENST00000395060 RINLQ6ZS11 566 aa15.11■□□□□ 0.01
CLIP2-203ENST00000395060 FBXL13Q8NEE6 735 aa15.11■□□□□ 0.01
CLIP2-203ENST00000395060 DDX1Q92499 740 aaKnown RBP15.11■□□□□ 0.01
CLIP2-203ENST00000395060 STMN2Q93045 179 aa15.11■□□□□ 0.01
CLIP2-203ENST00000395060 CCDC17Q96LX7 622 aa15.11■□□□□ 0.01
CLIP2-203ENST00000395060 TTC1Q99614 292 aa15.11■□□□□ 0.01
CLIP2-203ENST00000395060 LGALS13Q9UHV8 139 aa15.11■□□□□ 0.01
CLIP2-203ENST00000395060 THSD7AQ9UPZ6 1657 aa15.11■□□□□ 0.01
CLIP2-203ENST00000395060 ATAD5Q96QE3 1844 aa15.11■□□□□ 0.01
CLIP2-203ENST00000395060 TLR3O15455 904 aaKnown RBP15.11■□□□□ 0.01
CLIP2-203ENST00000395060 HAUS5O94927 633 aa15.11■□□□□ 0.01
CLIP2-203ENST00000395060 KRT1P04264 644 aa15.11■□□□□ 0.01
CLIP2-203ENST00000395060 PTPN4P29074 926 aa15.11■□□□□ 0.01
CLIP2-203ENST00000395060 SKIV2L2P42285 1042 aaKnown RBP15.11■□□□□ 0.01
CLIP2-203ENST00000395060 NEK3P51956 506 aa15.11■□□□□ 0.01
CLIP2-203ENST00000395060 STAT2P52630 851 aa15.11■□□□□ 0.01
CLIP2-203ENST00000395060 ACVR2BQ13705 512 aa15.11■□□□□ 0.01
CLIP2-203ENST00000395060 UGCGQ16739 394 aa15.11■□□□□ 0.01
CLIP2-203ENST00000395060 PARP6Q2NL67 630 aa15.11■□□□□ 0.01
CLIP2-203ENST00000395060 BBS9Q3SYG4 887 aa15.11■□□□□ 0.01
CLIP2-203ENST00000395060 XKR9Q5GH70 373 aa15.11■□□□□ 0.01
CLIP2-203ENST00000395060 MFSD7Q6UXD7 560 aa15.11■□□□□ 0.01
CLIP2-203ENST00000395060 RBBP8NLQ8NC74 664 aaPredicted RBP15.11■□□□□ 0.01
CLIP2-203ENST00000395060 FBXO27Q8NI29 283 aa15.11■□□□□ 0.01
CLIP2-203ENST00000395060 FAM161BQ96MY7 647 aa15.11■□□□□ 0.01
CLIP2-203ENST00000395060 ZNF395Q9H8N7 513 aaPredicted RBP15.11■□□□□ 0.01
CLIP2-203ENST00000395060 GINM1Q9NU53 330 aa15.11■□□□□ 0.01
CLIP2-203ENST00000395060 FAM198AQ9UFP1 575 aa15.11■□□□□ 0.01
CLIP2-203ENST00000395060 KIF3CO14782 793 aa15.1■□□□□ 0.01
CLIP2-203ENST00000395060 USP1O94782 785 aa15.1■□□□□ 0.01
CLIP2-203ENST00000395060 AMPD1P23109 780 aa15.1■□□□□ 0.01
CLIP2-203ENST00000395060 CNGA1P29973 690 aa15.1■□□□□ 0.01
CLIP2-203ENST00000395060 ALCAMQ13740 583 aa15.1■□□□□ 0.01
CLIP2-203ENST00000395060 EGFL6Q8IUX8 553 aa15.1■□□□□ 0.01
CLIP2-203ENST00000395060 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.1■□□□□ 0.015e-6■■■■■ 81.8
CLIP2-203ENST00000395060 MASTLQ96GX5 879 aa15.1■□□□□ 0.01
CLIP2-203ENST00000395060 TRIM4Q9C037 500 aa15.1■□□□□ 0.01
CLIP2-203ENST00000395060 PI4KBQ9UBF8 816 aa15.1■□□□□ 0.01
CLIP2-203ENST00000395060 DENND3A2RUS2 1198 aa15.1■□□□□ 0.01
CLIP2-203ENST00000395060 MYCLP12524 364 aaPredicted RBP15.1■□□□□ 0.01
CLIP2-203ENST00000395060 ITGB5P18084 799 aa15.1■□□□□ 0.01
CLIP2-203ENST00000395060 TNNI1P19237 187 aa15.1■□□□□ 0.01
CLIP2-203ENST00000395060 MRPS35P82673 323 aaKnown RBP15.1■□□□□ 0.01
CLIP2-203ENST00000395060 KDSRQ06136 332 aa15.1■□□□□ 0.01
CLIP2-203ENST00000395060 PPP2R5CQ13362 524 aa15.1■□□□□ 0.01
CLIP2-203ENST00000395060 C11orf91Q3C1V1 193 aa15.1■□□□□ 0.01
CLIP2-203ENST00000395060 KCNT1Q5JUK3 1230 aa15.1■□□□□ 0.01
CLIP2-203ENST00000395060 TMEM270Q6UE05 265 aa15.1■□□□□ 0.01
CLIP2-203ENST00000395060 ALYREFQ86V81 257 aaKnown RBP15.1■□□□□ 0.01
CLIP2-203ENST00000395060 RHPN2Q8IUC4 686 aa15.1■□□□□ 0.01
CLIP2-203ENST00000395060 DENND1AQ8TEH3 1009 aa15.1■□□□□ 0.01
CLIP2-203ENST00000395060 TMEM206Q9H813 350 aa15.1■□□□□ 0.01
CLIP2-203ENST00000395060 NYAP2Q9P242 653 aa15.1■□□□□ 0.01
CLIP2-203ENST00000395060 KANSL3Q9P2N6 904 aa15.1■□□□□ 0.01
CLIP2-203ENST00000395060 CDK5RAP2Q96SN8 1893 aa15.1■□□□□ 0.01
CLIP2-203ENST00000395060 PIK3CDO00329 1044 aa15.1■□□□□ 0.01
CLIP2-203ENST00000395060 ECE2O60344 883 aa15.1■□□□□ 0.01
CLIP2-203ENST00000395060 TROVE2P10155 538 aaKnown RBP eCLIP15.1■□□□□ 0.01
CLIP2-203ENST00000395060 RFX1P22670 979 aa15.1■□□□□ 0.01
CLIP2-203ENST00000395060 RAB27AP51159 221 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms