RNA–Protein interactions for RNA: ENST00000394991.7

SNCA-205, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-205ENST00000394991 ZNF174Q15697 407 aa17.28■□□□□ 0.36
SNCA-205ENST00000394991 SLC10A6Q3KNW5 377 aa17.28■□□□□ 0.36
SNCA-205ENST00000394991 SEZ6Q53EL9 994 aa17.28■□□□□ 0.36
SNCA-205ENST00000394991 TIMM13Q9Y5L4 95 aaPredicted RBP17.28■□□□□ 0.36
SNCA-205ENST00000394991 ZFYVE26Q68DK2 2539 aa17.28■□□□□ 0.36
SNCA-205ENST00000394991 NUP205Q92621 2012 aa17.28■□□□□ 0.36
SNCA-205ENST00000394991 M0QZQ0 153 aa17.27■□□□□ 0.36
SNCA-205ENST00000394991 OAZ2O95190 189 aa17.27■□□□□ 0.36
SNCA-205ENST00000394991 PRAMEF12O95522 483 aa17.27■□□□□ 0.36
SNCA-205ENST00000394991 ZNF806P0C7X5 589 aa17.27■□□□□ 0.36
SNCA-205ENST00000394991 PXNP49023 591 aaPredicted RBP17.27■□□□□ 0.36
SNCA-205ENST00000394991 GUCY1B3Q02153 619 aa17.27■□□□□ 0.36
SNCA-205ENST00000394991 YWHAHQ04917 246 aaPredicted RBP17.27■□□□□ 0.36
SNCA-205ENST00000394991 TNK2Q07912 1038 aa17.27■□□□□ 0.36
SNCA-205ENST00000394991 ST3GAL1Q11201 340 aa17.27■□□□□ 0.36
SNCA-205ENST00000394991 DUSP4Q13115 394 aa17.27■□□□□ 0.36
SNCA-205ENST00000394991 MAPK7Q13164 816 aa17.27■□□□□ 0.36
SNCA-205ENST00000394991 TRIM29Q14134 588 aa17.27■□□□□ 0.36
SNCA-205ENST00000394991 ARHGAP29Q52LW3 1261 aa17.27■□□□□ 0.36
SNCA-205ENST00000394991 HAUS3Q68CZ6 603 aa17.27■□□□□ 0.36
SNCA-205ENST00000394991 GAREM2Q75VX8 874 aa17.27■□□□□ 0.36
SNCA-205ENST00000394991 TTC9BQ8N6N2 239 aa17.27■□□□□ 0.36
SNCA-205ENST00000394991 GAB3Q8WWW8 586 aa17.27■□□□□ 0.36
SNCA-205ENST00000394991 TCHPQ9BT92 498 aa17.27■□□□□ 0.36
SNCA-205ENST00000394991 KIAA1024Q9UPX6 916 aa17.27■□□□□ 0.36
SNCA-205ENST00000394991 HIP1RO75146 1068 aa17.26■□□□□ 0.35
SNCA-205ENST00000394991 MARCKSP29966 332 aaPredicted RBP17.26■□□□□ 0.35
SNCA-205ENST00000394991 RAP1GAPP47736 663 aa17.26■□□□□ 0.35
SNCA-205ENST00000394991 EPHB3P54753 998 aa17.26■□□□□ 0.35
SNCA-205ENST00000394991 CACNB1Q02641 598 aaPredicted RBP17.26■□□□□ 0.35
SNCA-205ENST00000394991 PLD1Q13393 1074 aa17.26■□□□□ 0.35
SNCA-205ENST00000394991 ANKRD1Q15327 319 aa17.26■□□□□ 0.35
SNCA-205ENST00000394991 STPG1Q5TH74 334 aa17.26■□□□□ 0.35
SNCA-205ENST00000394991 KBTBD6Q86V97 674 aa17.26■□□□□ 0.35
SNCA-205ENST00000394991 C12orf50Q8NA57 414 aaPredicted RBP17.26■□□□□ 0.35
SNCA-205ENST00000394991 FAM200AQ8TCP9 573 aa17.26■□□□□ 0.35
SNCA-205ENST00000394991 LOXL4Q96JB6 756 aa17.26■□□□□ 0.35
SNCA-205ENST00000394991 SMOC1Q9H4F8 434 aa17.26■□□□□ 0.35
SNCA-205ENST00000394991 KMT5AQ9NQR1 393 aa17.26■□□□□ 0.35
SNCA-205ENST00000394991 DDX19AQ9NUU7 478 aaKnown RBP17.26■□□□□ 0.35
SNCA-205ENST00000394991 TCHHQ07283 1943 aa17.25■□□□□ 0.35
SNCA-205ENST00000394991 SCN1AP35498 2009 aa17.25■□□□□ 0.35
SNCA-205ENST00000394991 MTMR11A4FU01 709 aa17.25■□□□□ 0.35
SNCA-205ENST00000394991 SOAT2O75908 522 aa17.25■□□□□ 0.35
SNCA-205ENST00000394991 AARSP49588 968 aaKnown RBP eCLIP17.25■□□□□ 0.35
SNCA-205ENST00000394991 SPAG1Q07617 926 aa17.25■□□□□ 0.35
SNCA-205ENST00000394991 GPR17Q13304 367 aa17.25■□□□□ 0.35
SNCA-205ENST00000394991 DMP1Q13316 513 aaPredicted RBP17.25■□□□□ 0.35
SNCA-205ENST00000394991 ORC2Q13416 577 aaPredicted RBP17.25■□□□□ 0.35
SNCA-205ENST00000394991 PLA2G2CQ5R387 149 aa17.25■□□□□ 0.35
SNCA-205ENST00000394991 GPR158Q5T848 1215 aa17.25■□□□□ 0.35
SNCA-205ENST00000394991 CENPPQ6IPU0 288 aa17.25■□□□□ 0.35
SNCA-205ENST00000394991 SYNPOQ8N3V7 929 aa17.25■□□□□ 0.35
SNCA-205ENST00000394991 ATAD1Q8NBU5 361 aa17.25■□□□□ 0.35
SNCA-205ENST00000394991 RUSC1Q9BVN2 902 aa17.25■□□□□ 0.35
SNCA-205ENST00000394991 OBP2AQ9NY56 170 aa17.25■□□□□ 0.35
SNCA-205ENST00000394991 ANKFY1Q9P2R3 1169 aa17.25■□□□□ 0.35
SNCA-205ENST00000394991 SLC27A5Q9Y2P5 690 aa17.25■□□□□ 0.35
SNCA-205ENST00000394991 E9PMD0 336 aa17.24■□□□□ 0.35
SNCA-205ENST00000394991 DPYSL4O14531 572 aa17.24■□□□□ 0.35
SNCA-205ENST00000394991 SLC16A4O15374 487 aa17.24■□□□□ 0.35
SNCA-205ENST00000394991 RPP40O75818 363 aaKnown RBP17.24■□□□□ 0.35
SNCA-205ENST00000394991 CXCL8P10145 99 aa17.24■□□□□ 0.35
SNCA-205ENST00000394991 GABRR2P28476 465 aa17.24■□□□□ 0.35
SNCA-205ENST00000394991 LRPAP1P30533 357 aa17.24■□□□□ 0.35
SNCA-205ENST00000394991 FXR2P51116 673 aaKnown RBP eCLIP17.24■□□□□ 0.35
SNCA-205ENST00000394991 NOLC1Q14978 699 aaKnown RBP eCLIP17.24■□□□□ 0.35
SNCA-205ENST00000394991 CACNA2D4Q7Z3S7 1137 aa17.24■□□□□ 0.35
SNCA-205ENST00000394991 DNAJB7Q7Z6W7 309 aaPredicted RBP17.24■□□□□ 0.35
SNCA-205ENST00000394991 C4orf32Q8N8J7 132 aa17.24■□□□□ 0.35
SNCA-205ENST00000394991 BPIFB1Q8TDL5 484 aa17.24■□□□□ 0.35
SNCA-205ENST00000394991 PSMG2Q969U7 264 aa17.24■□□□□ 0.35
SNCA-205ENST00000394991 TMEM209Q96SK2 561 aa17.24■□□□□ 0.35
SNCA-205ENST00000394991 ATXN3LQ9H3M9 355 aa17.24■□□□□ 0.35
SNCA-205ENST00000394991 POLR3BQ9NW08 1133 aaPredicted RBP17.24■□□□□ 0.35
SNCA-205ENST00000394991 LAMA1P25391 3075 aa17.24■□□□□ 0.35
SNCA-205ENST00000394991 ABCA7Q8IZY2 2146 aa17.23■□□□□ 0.35
SNCA-205ENST00000394991 OR6C75A6NL08 312 aa17.23■□□□□ 0.35
SNCA-205ENST00000394991 KCNK5O95279 499 aa17.23■□□□□ 0.35
SNCA-205ENST00000394991 ALDH1A3P47895 512 aa17.23■□□□□ 0.35
SNCA-205ENST00000394991 GUCY2FP51841 1108 aa17.23■□□□□ 0.35
SNCA-205ENST00000394991 CYP4F8P98187 520 aa17.23■□□□□ 0.35
SNCA-205ENST00000394991 NBR1Q14596 966 aa17.23■□□□□ 0.35
SNCA-205ENST00000394991 ZBTB6Q15916 424 aa17.23■□□□□ 0.35
SNCA-205ENST00000394991 TTC38Q5R3I4 469 aa17.23■□□□□ 0.35
SNCA-205ENST00000394991 FSTL4Q6MZW2 842 aa17.23■□□□□ 0.35
SNCA-205ENST00000394991 HAUS6Q7Z4H7 955 aa17.23■□□□□ 0.35
SNCA-205ENST00000394991 SNX29Q8TEQ0 813 aa17.23■□□□□ 0.35
SNCA-205ENST00000394991 CHFRQ96EP1 664 aa17.23■□□□□ 0.35
SNCA-205ENST00000394991 HAPLN2Q9GZV7 340 aa17.23■□□□□ 0.35
SNCA-205ENST00000394991 SMG9Q9H0W8 520 aaKnown RBP17.23■□□□□ 0.35
SNCA-205ENST00000394991 LRWD1Q9UFC0 647 aa17.23■□□□□ 0.35
SNCA-205ENST00000394991 RBM19Q9Y4C8 960 aaKnown RBP17.23■□□□□ 0.35
SNCA-205ENST00000394991 ASB3Q9Y575 518 aa17.23■□□□□ 0.35
SNCA-205ENST00000394991 CCDC163A0A0D9SF12 145 aa17.22■□□□□ 0.35
SNCA-205ENST00000394991 SFI1A8K8P3 1242 aa17.22■□□□□ 0.35
SNCA-205ENST00000394991 PPEF2O14830 753 aa17.22■□□□□ 0.35
SNCA-205ENST00000394991 TOM1L1O75674 476 aa17.22■□□□□ 0.35
SNCA-205ENST00000394991 PROS1P07225 676 aa17.22■□□□□ 0.35
SNCA-205ENST00000394991 MPLP40238 635 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms