RNA–Protein interactions for RNA: ENST00000394989.6

SNCA-204, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,167 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-204ENST00000394989 ATG4AQ8WYN0 398 aa14.83□□□□□ -0.03
SNCA-204ENST00000394989 NIF3L1Q9GZT8 377 aa14.83□□□□□ -0.03
SNCA-204ENST00000394989 CDT1Q9H211 546 aa14.83□□□□□ -0.03
SNCA-204ENST00000394989 CHST7Q9NS84 486 aa14.83□□□□□ -0.03
SNCA-204ENST00000394989 PLXNB2O15031 1838 aa14.83□□□□□ -0.03
SNCA-204ENST00000394989 MYZAPP0CAP1 466 aa14.83□□□□□ -0.04
SNCA-204ENST00000394989 BRD2P25440 801 aaKnown RBP14.83□□□□□ -0.04
SNCA-204ENST00000394989 C1QBPQ07021 282 aaKnown RBP14.83□□□□□ -0.04
SNCA-204ENST00000394989 PDCLQ13371 301 aa14.83□□□□□ -0.04
SNCA-204ENST00000394989 SGSM1Q2NKQ1 1148 aa14.83□□□□□ -0.04
SNCA-204ENST00000394989 ZNF792Q3KQV3 632 aa14.83□□□□□ -0.04
SNCA-204ENST00000394989 EAPPQ56P03 285 aaPredicted RBP14.83□□□□□ -0.04
SNCA-204ENST00000394989 CCDC91Q7Z6B0 441 aa14.83□□□□□ -0.04
SNCA-204ENST00000394989 ERAP1Q9NZ08 941 aa14.83□□□□□ -0.04
SNCA-204ENST00000394989 ZSWIM8A7E2V4 1837 aa14.83□□□□□ -0.04
SNCA-204ENST00000394989 EIF3HO15372 352 aaKnown RBP eCLIP14.83□□□□□ -0.04
SNCA-204ENST00000394989 B4GALT4O60513 344 aa14.83□□□□□ -0.04
SNCA-204ENST00000394989 CXCL8P10145 99 aa14.83□□□□□ -0.04
SNCA-204ENST00000394989 INSRRP14616 1297 aa14.83□□□□□ -0.04
SNCA-204ENST00000394989 LIN9Q5TKA1 542 aa14.83□□□□□ -0.04
SNCA-204ENST00000394989 WDTC1Q8N5D0 677 aa14.83□□□□□ -0.04
SNCA-204ENST00000394989 TFAP2BQ92481 460 aa14.83□□□□□ -0.04
SNCA-204ENST00000394989 DNAH12Q6ZR08 3092 aa14.82□□□□□ -0.04
SNCA-204ENST00000394989 TCRBV5S1A1TA0A578 114 aa14.82□□□□□ -0.04
SNCA-204ENST00000394989 ASB14A6NK59 587 aa14.82□□□□□ -0.04
SNCA-204ENST00000394989 GPR25O00155 361 aa14.82□□□□□ -0.04
SNCA-204ENST00000394989 TLR3O15455 904 aaKnown RBP14.82□□□□□ -0.04
SNCA-204ENST00000394989 LGALS2P05162 132 aa14.82□□□□□ -0.04
SNCA-204ENST00000394989 KLF1Q13351 362 aaPredicted RBP14.82□□□□□ -0.04
SNCA-204ENST00000394989 TFDP1Q14186 410 aa14.82□□□□□ -0.04
SNCA-204ENST00000394989 SGO2Q562F6 1265 aa14.82□□□□□ -0.04
SNCA-204ENST00000394989 SCARA5Q6ZMJ2 495 aa14.82□□□□□ -0.04
SNCA-204ENST00000394989 SLCO2A1Q92959 643 aa14.82□□□□□ -0.04
SNCA-204ENST00000394989 R3HDM2Q9Y2K5 976 aaKnown RBP14.82□□□□□ -0.04
SNCA-204ENST00000394989 DCDC2CA8MYV0 355 aa14.82□□□□□ -0.04
SNCA-204ENST00000394989 SHBGP04278 402 aa14.82□□□□□ -0.04
SNCA-204ENST00000394989 TCF4P15884 667 aa14.82□□□□□ -0.04
SNCA-204ENST00000394989 ADORA2AP29274 412 aa14.82□□□□□ -0.04
SNCA-204ENST00000394989 GUCY1A3Q02108 690 aa14.82□□□□□ -0.04
SNCA-204ENST00000394989 ZNF252P-AS1Q0IIN9 211 aa14.82□□□□□ -0.04
SNCA-204ENST00000394989 SNX1Q13596 522 aa14.82□□□□□ -0.04
SNCA-204ENST00000394989 AMHR2Q16671 573 aa14.82□□□□□ -0.04
SNCA-204ENST00000394989 RNF187Q5TA31 235 aaPredicted RBP14.82□□□□□ -0.04
SNCA-204ENST00000394989 LINC01465Q8N7H1 131 aa14.82□□□□□ -0.04
SNCA-204ENST00000394989 PPP1R16BQ96T49 567 aa14.82□□□□□ -0.04
SNCA-204ENST00000394989 MRPL47Q9HD33 250 aaKnown RBP14.82□□□□□ -0.04
SNCA-204ENST00000394989 TNFSF13BQ9Y275 285 aa14.82□□□□□ -0.04
SNCA-204ENST00000394989 TMEM191BP0C7N4 346 aa14.81□□□□□ -0.04
SNCA-204ENST00000394989 ZNF699Q32M78 642 aa14.81□□□□□ -0.04
SNCA-204ENST00000394989 SPDYCQ5MJ68 293 aa14.81□□□□□ -0.04
SNCA-204ENST00000394989 GPRC5AQ8NFJ5 357 aa14.81□□□□□ -0.04
SNCA-204ENST00000394989 ART4Q93070 314 aa14.81□□□□□ -0.04
SNCA-204ENST00000394989 RNF25Q96BH1 459 aaPredicted RBP14.81□□□□□ -0.04
SNCA-204ENST00000394989 MS4A4AQ96JQ5 239 aa14.81□□□□□ -0.04
SNCA-204ENST00000394989 PLVAPQ9BX97 442 aa14.81□□□□□ -0.04
SNCA-204ENST00000394989 NFKBIZQ9BYH8 718 aa14.81□□□□□ -0.04
SNCA-204ENST00000394989 KATNBL1Q9H079 304 aa14.81□□□□□ -0.04
SNCA-204ENST00000394989 PARVAQ9NVD7 372 aa14.81□□□□□ -0.04
SNCA-204ENST00000394989 SIX4Q9UIU6 781 aa14.81□□□□□ -0.04
SNCA-204ENST00000394989 POLIQ9UNA4 740 aa14.81□□□□□ -0.04
SNCA-204ENST00000394989 POTEJP0CG39 1038 aa14.81□□□□□ -0.04
SNCA-204ENST00000394989 PMS2P54278 862 aa14.81□□□□□ -0.04
SNCA-204ENST00000394989 TRPC3Q13507 836 aa14.81□□□□□ -0.04
SNCA-204ENST00000394989 SURF1Q15526 300 aa14.81□□□□□ -0.04
SNCA-204ENST00000394989 PABPC3Q9H361 631 aaKnown RBP14.81□□□□□ -0.04
SNCA-204ENST00000394989 CD248Q9HCU0 757 aa14.81□□□□□ -0.04
SNCA-204ENST00000394989 SCINQ9Y6U3 715 aa14.81□□□□□ -0.04
SNCA-204ENST00000394989 GOLGA6L10A6NI86 522 aa14.81□□□□□ -0.04
SNCA-204ENST00000394989 PSTPIP1O43586 416 aa14.81□□□□□ -0.04
SNCA-204ENST00000394989 ECEL1O95672 775 aa14.81□□□□□ -0.04
SNCA-204ENST00000394989 ITGBL1O95965 494 aaPredicted RBP14.81□□□□□ -0.04
SNCA-204ENST00000394989 ZNF286BP0CG31 522 aa14.81□□□□□ -0.04
SNCA-204ENST00000394989 RALAP11233 206 aa14.81□□□□□ -0.04
SNCA-204ENST00000394989 FEZF2Q8TBJ5 459 aa14.81□□□□□ -0.04
SNCA-204ENST00000394989 SLC10A4Q96EP9 437 aa14.81□□□□□ -0.04
SNCA-204ENST00000394989 HEMGNQ9BXL5 484 aa14.81□□□□□ -0.04
SNCA-204ENST00000394989 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.81□□□□□ -0.04
SNCA-204ENST00000394989 A0A087WZ62 844 aa14.8□□□□□ -0.04
SNCA-204ENST00000394989 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.8□□□□□ -0.04
SNCA-204ENST00000394989 PDHXO00330 501 aa14.8□□□□□ -0.04
SNCA-204ENST00000394989 NDUFAB1O14561 156 aa14.8□□□□□ -0.04
SNCA-204ENST00000394989 ATP2C2O75185 946 aa14.8□□□□□ -0.04
SNCA-204ENST00000394989 NFICP08651 508 aa14.8□□□□□ -0.04
SNCA-204ENST00000394989 ADCYAP1R1P41586 468 aa14.8□□□□□ -0.04
SNCA-204ENST00000394989 RAP1GAPP47736 663 aa14.8□□□□□ -0.04
SNCA-204ENST00000394989 KRT17Q04695 432 aa14.8□□□□□ -0.04
SNCA-204ENST00000394989 RHOT1Q8IXI2 618 aa14.8□□□□□ -0.04
SNCA-204ENST00000394989 C1orf127Q8N9H9 656 aa14.8□□□□□ -0.04
SNCA-204ENST00000394989 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.8□□□□□ -0.04
SNCA-204ENST00000394989 CXorf38Q8TB03 319 aa14.8□□□□□ -0.04
SNCA-204ENST00000394989 RUNDC3BQ96NL0 473 aa14.8□□□□□ -0.04
SNCA-204ENST00000394989 FDXACB1Q9BRP7 624 aaPredicted RBP14.8□□□□□ -0.04
SNCA-204ENST00000394989 SEMA4AQ9H3S1 761 aa14.8□□□□□ -0.04
SNCA-204ENST00000394989 USTQ9Y2C2 406 aa14.8□□□□□ -0.04
SNCA-204ENST00000394989 PASKQ96RG2 1323 aa14.8□□□□□ -0.04
SNCA-204ENST00000394989 TMEM191CA6NGB0 347 aa14.8□□□□□ -0.04
SNCA-204ENST00000394989 ASAP2O43150 1006 aa14.8□□□□□ -0.04
SNCA-204ENST00000394989 NUDT17P0C025 328 aa14.8□□□□□ -0.04
SNCA-204ENST00000394989 HPDP32754 393 aaPredicted RBP14.8□□□□□ -0.04
SNCA-204ENST00000394989 OGDHQ02218 1023 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms