RNA–Protein interactions for RNA: ENST00000394872.6

COL4A6-203, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5 BASIC

Gene COL4A6, Length 6,750 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-203ENST00000394872 DPP3Q9NY33 737 aa10.88□□□□□ -0.67
COL4A6-203ENST00000394872 GPR182O15218 404 aa10.87□□□□□ -0.67
COL4A6-203ENST00000394872 SNRPFP62306 86 aaKnown RBP10.87□□□□□ -0.67
COL4A6-203ENST00000394872 CCDC15Q0P6D6 951 aa10.87□□□□□ -0.67
COL4A6-203ENST00000394872 RFX8Q6ZV50 586 aa10.87□□□□□ -0.67
COL4A6-203ENST00000394872 SHCBP1Q8NEM2 672 aa10.87□□□□□ -0.67
COL4A6-203ENST00000394872 KCNV2Q8TDN2 545 aa10.87□□□□□ -0.67
COL4A6-203ENST00000394872 CINPQ9BW66 212 aaPredicted RBP10.87□□□□□ -0.67
COL4A6-203ENST00000394872 TASP1Q9H6P5 420 aa10.87□□□□□ -0.67
COL4A6-203ENST00000394872 AURKCQ9UQB9 309 aa10.87□□□□□ -0.67
COL4A6-203ENST00000394872 H7C4K7 107 aa10.87□□□□□ -0.67
COL4A6-203ENST00000394872 CHUKO15111 745 aa10.87□□□□□ -0.67
COL4A6-203ENST00000394872 RHOBTB3O94955 611 aa10.87□□□□□ -0.67
COL4A6-203ENST00000394872 BRD2P25440 801 aaKnown RBP10.87□□□□□ -0.67
COL4A6-203ENST00000394872 CDH18Q13634 790 aa10.87□□□□□ -0.67
COL4A6-203ENST00000394872 MDH1BQ5I0G3 518 aa10.87□□□□□ -0.67
COL4A6-203ENST00000394872 C16orf87Q6PH81 154 aa10.87□□□□□ -0.67
COL4A6-203ENST00000394872 ADSSL1Q8N142 457 aa10.87□□□□□ -0.67
COL4A6-203ENST00000394872 CEP70Q8NHQ1 597 aa10.87□□□□□ -0.67
COL4A6-203ENST00000394872 BHMTQ93088 406 aa10.87□□□□□ -0.67
COL4A6-203ENST00000394872 ZFYVE19Q96K21 471 aa10.87□□□□□ -0.67
COL4A6-203ENST00000394872 ANKEF1Q9NU02 776 aa10.87□□□□□ -0.67
COL4A6-203ENST00000394872 IQSEC2Q5JU85 1478 aa10.87□□□□□ -0.67
COL4A6-203ENST00000394872 RPS6P62753 249 aaKnown RBP10.87□□□□□ -0.67
COL4A6-203ENST00000394872 AMHR2Q16671 573 aa10.87□□□□□ -0.67
COL4A6-203ENST00000394872 CYP4A22Q5TCH4 519 aa10.87□□□□□ -0.67
COL4A6-203ENST00000394872 ANO5Q75V66 913 aa10.87□□□□□ -0.67
COL4A6-203ENST00000394872 PLEKHH3Q7Z736 793 aa10.87□□□□□ -0.67
COL4A6-203ENST00000394872 B4GALNT2Q8NHY0 566 aa10.87□□□□□ -0.67
COL4A6-203ENST00000394872 ZMAT2Q96NC0 199 aaKnown RBP10.87□□□□□ -0.67
COL4A6-203ENST00000394872 NIF3L1Q9GZT8 377 aa10.87□□□□□ -0.67
COL4A6-203ENST00000394872 WWP1Q9H0M0 922 aa10.87□□□□□ -0.67
COL4A6-203ENST00000394872 STOML1Q9UBI4 398 aa10.87□□□□□ -0.67
COL4A6-203ENST00000394872 FHOD1Q9Y613 1164 aa10.87□□□□□ -0.67
COL4A6-203ENST00000394872 ADGRA2Q96PE1 1338 aa10.87□□□□□ -0.67
COL4A6-203ENST00000394872 CFAP99D6REC4 459 aa10.87□□□□□ -0.67
COL4A6-203ENST00000394872 SRGNP10124 158 aa10.87□□□□□ -0.67
COL4A6-203ENST00000394872 RGS4P49798 205 aa10.87□□□□□ -0.67
COL4A6-203ENST00000394872 SMTNL2Q2TAL5 461 aa10.87□□□□□ -0.67
COL4A6-203ENST00000394872 ATP6V0D2Q8N8Y2 350 aa10.87□□□□□ -0.67
COL4A6-203ENST00000394872 GPRASP2Q96D09 838 aa10.87□□□□□ -0.67
COL4A6-203ENST00000394872 TMEM169Q96HH4 297 aa10.87□□□□□ -0.67
COL4A6-203ENST00000394872 APOL5Q9BWW9 433 aa10.87□□□□□ -0.67
COL4A6-203ENST00000394872 ADAM33Q9BZ11 813 aa10.87□□□□□ -0.67
COL4A6-203ENST00000394872 EPB41L4AQ9HCS5 686 aaPredicted RBP10.87□□□□□ -0.67
COL4A6-203ENST00000394872 ZNF513Q8N8E2 541 aaPredicted RBP10.87□□□□□ -0.67
COL4A6-203ENST00000394872 ZCWPW1Q9H0M4 648 aa10.87□□□□□ -0.67
COL4A6-203ENST00000394872 TMEM161AQ9NX61 479 aa10.87□□□□□ -0.67
COL4A6-203ENST00000394872 TRAF3IP3Q9Y228 551 aa10.87□□□□□ -0.67
COL4A6-203ENST00000394872 E2F8A0AVK6 867 aa10.86□□□□□ -0.67
COL4A6-203ENST00000394872 USP27XA6NNY8 438 aa10.86□□□□□ -0.67
COL4A6-203ENST00000394872 ZNF185O15231 689 aa10.86□□□□□ -0.67
COL4A6-203ENST00000394872 FOXP2O15409 715 aa10.86□□□□□ -0.67
COL4A6-203ENST00000394872 PRKCQQ04759 706 aa10.86□□□□□ -0.67
COL4A6-203ENST00000394872 TRIM48Q8IWZ4 208 aa10.86□□□□□ -0.67
COL4A6-203ENST00000394872 NUP93Q8N1F7 819 aa10.86□□□□□ -0.67
COL4A6-203ENST00000394872 COG1Q8WTW3 980 aa10.86□□□□□ -0.67
COL4A6-203ENST00000394872 GRAMD1AQ96CP6 724 aa10.86□□□□□ -0.67
COL4A6-203ENST00000394872 MRFAP1Q9Y605 127 aa10.86□□□□□ -0.67
COL4A6-203ENST00000394872 DCDC2CA8MYV0 355 aa10.86□□□□□ -0.67
COL4A6-203ENST00000394872 ICAM1P05362 532 aa10.86□□□□□ -0.67
COL4A6-203ENST00000394872 MED21Q13503 144 aa10.86□□□□□ -0.67
COL4A6-203ENST00000394872 MTF1Q14872 753 aa10.86□□□□□ -0.67
COL4A6-203ENST00000394872 C9orf131Q5VYM1 1079 aa10.86□□□□□ -0.67
COL4A6-203ENST00000394872 PRMT1Q99873 361 aaKnown RBP10.86□□□□□ -0.67
COL4A6-203ENST00000394872 TARS2Q9BW92 718 aaKnown RBP10.86□□□□□ -0.67
COL4A6-203ENST00000394872 FAM129AQ9BZQ8 928 aa10.86□□□□□ -0.67
COL4A6-203ENST00000394872 NSMCE4AQ9NXX6 385 aa10.86□□□□□ -0.67
COL4A6-203ENST00000394872 ERCC6L2Q5T890 1561 aa10.86□□□□□ -0.67
COL4A6-203ENST00000394872 GPR75-ASB3A0A0A6YYF3 556 aa10.86□□□□□ -0.67
COL4A6-203ENST00000394872 PRR23AA6NEV1 266 aa10.86□□□□□ -0.67
COL4A6-203ENST00000394872 PJA2O43164 708 aa10.86□□□□□ -0.67
COL4A6-203ENST00000394872 MYL2P10916 166 aa10.86□□□□□ -0.67
COL4A6-203ENST00000394872 MAPRE1Q15691 268 aaKnown RBP10.86□□□□□ -0.67
COL4A6-203ENST00000394872 SPATA4Q8NEY3 305 aa10.86□□□□□ -0.67
COL4A6-203ENST00000394872 CALML6Q8TD86 181 aa10.86□□□□□ -0.67
COL4A6-203ENST00000394872 NEU2Q9Y3R4 380 aa10.86□□□□□ -0.67
COL4A6-203ENST00000394872 PCDHB2Q9Y5E7 798 aa10.86□□□□□ -0.67
COL4A6-203ENST00000394872 CNTNAP5Q8WYK1 1306 aa10.86□□□□□ -0.67
COL4A6-203ENST00000394872 USP42Q9H9J4 1324 aaKnown RBP10.86□□□□□ -0.67
COL4A6-203ENST00000394872 TMEM132BQ14DG7 1078 aa10.86□□□□□ -0.67
COL4A6-203ENST00000394872 GLRA4Q5JXX5 417 aa10.86□□□□□ -0.67
COL4A6-203ENST00000394872 TRAPPC11Q7Z392 1133 aa10.86□□□□□ -0.67
COL4A6-203ENST00000394872 C11orf96Q7Z7L8 435 aa10.86□□□□□ -0.67
COL4A6-203ENST00000394872 STX19Q8N4C7 294 aa10.86□□□□□ -0.67
COL4A6-203ENST00000394872 ADARB2Q9NS39 739 aaKnown RBP10.86□□□□□ -0.67
COL4A6-203ENST00000394872 PCMTD2Q9NV79 361 aa10.86□□□□□ -0.67
COL4A6-203ENST00000394872 TARSL2A2RTX5 802 aaKnown RBP10.86□□□□□ -0.67
COL4A6-203ENST00000394872 KDM1AO60341 852 aa10.86□□□□□ -0.67
COL4A6-203ENST00000394872 DDHD2O94830 711 aa10.86□□□□□ -0.67
COL4A6-203ENST00000394872 PDHA1P08559 390 aa10.86□□□□□ -0.67
COL4A6-203ENST00000394872 SERPINB9P50453 376 aa10.86□□□□□ -0.67
COL4A6-203ENST00000394872 NPEPPSP55786 919 aa10.86□□□□□ -0.67
COL4A6-203ENST00000394872 ZNF200P98182 395 aaPredicted RBP10.86□□□□□ -0.67
COL4A6-203ENST00000394872 GRAMD4Q6IC98 578 aa10.86□□□□□ -0.67
COL4A6-203ENST00000394872 RDM1Q8NG50 284 aa10.86□□□□□ -0.67
COL4A6-203ENST00000394872 SPATA18Q8TC71 538 aa10.86□□□□□ -0.67
COL4A6-203ENST00000394872 TRIM51Q9BSJ1 452 aa10.86□□□□□ -0.67
COL4A6-203ENST00000394872 ETNK1Q9HBU6 452 aa10.86□□□□□ -0.67
COL4A6-203ENST00000394872 PAK5Q9P286 719 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms