RNA–Protein interactions for RNA: ENST00000394688.7

BRD7-201, Transcript of bromodomain containing 7, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene BRD7, Length 5,370 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD7-201ENST00000394688 LRRC55Q6ZSA7 311 aa11.29□□□□□ -0.6
BRD7-201ENST00000394688 PDIK1LQ8N165 341 aa11.29□□□□□ -0.6
BRD7-201ENST00000394688 ACTRT1Q8TDG2 376 aa11.29□□□□□ -0.6
BRD7-201ENST00000394688 EXT2Q93063 718 aa11.29□□□□□ -0.6
BRD7-201ENST00000394688 NAALADL1Q9UQQ1 740 aa11.29□□□□□ -0.6
BRD7-201ENST00000394688 A6NJR5 290 aa11.28□□□□□ -0.6
BRD7-201ENST00000394688 NEMP1O14524 444 aa11.28□□□□□ -0.6
BRD7-201ENST00000394688 LCP1P13796 627 aa11.28□□□□□ -0.6
BRD7-201ENST00000394688 IL1R1P14778 569 aa11.28□□□□□ -0.6
BRD7-201ENST00000394688 HSPA6P17066 643 aa11.28□□□□□ -0.6
BRD7-201ENST00000394688 NPTX2P47972 431 aa11.28□□□□□ -0.6
BRD7-201ENST00000394688 GALNT4Q8N4A0 578 aa11.28□□□□□ -0.6
BRD7-201ENST00000394688 C1orf131Q8NDD1 294 aaKnown RBP11.28□□□□□ -0.6
BRD7-201ENST00000394688 FAM111AQ96PZ2 611 aa11.28□□□□□ -0.6
BRD7-201ENST00000394688 RPS6KC1Q96S38 1066 aa11.28□□□□□ -0.6
BRD7-201ENST00000394688 WDR18Q9BV38 432 aa11.28□□□□□ -0.6
BRD7-201ENST00000394688 MTMR12Q9C0I1 747 aa11.28□□□□□ -0.6
BRD7-201ENST00000394688 KDM4CQ9H3R0 1056 aa11.28□□□□□ -0.6
BRD7-201ENST00000394688 ACAD9Q9H845 621 aa11.28□□□□□ -0.6
BRD7-201ENST00000394688 GPATCH2LQ9NWQ4 482 aa11.28□□□□□ -0.6
BRD7-201ENST00000394688 SNX9Q9Y5X1 595 aa11.28□□□□□ -0.6
BRD7-201ENST00000394688 MEI4A8MW99 385 aa11.28□□□□□ -0.6
BRD7-201ENST00000394688 CPP00450 1065 aa11.28□□□□□ -0.6
BRD7-201ENST00000394688 RARAP10276 462 aa11.28□□□□□ -0.6
BRD7-201ENST00000394688 GTF2H1P32780 548 aa11.28□□□□□ -0.6
BRD7-201ENST00000394688 KRT76Q01546 638 aa11.28□□□□□ -0.6
BRD7-201ENST00000394688 GABPAQ06546 454 aa11.28□□□□□ -0.6
BRD7-201ENST00000394688 NCOA4Q13772 614 aa11.28□□□□□ -0.6
BRD7-201ENST00000394688 DACT2Q5SW24 774 aa11.28□□□□□ -0.6
BRD7-201ENST00000394688 RASSF3Q86WH2 238 aa11.28□□□□□ -0.6
BRD7-201ENST00000394688 INPP4AQ96PE3 977 aaPredicted RBP11.28□□□□□ -0.6
BRD7-201ENST00000394688 ZSWIM1Q9BR11 485 aa11.28□□□□□ -0.6
BRD7-201ENST00000394688 CEP41Q9BYV8 373 aa11.28□□□□□ -0.6
BRD7-201ENST00000394688 ZFATQ9P243 1243 aa11.28□□□□□ -0.6
BRD7-201ENST00000394688 FMN2Q9NZ56 1722 aa11.28□□□□□ -0.6
BRD7-201ENST00000394688 UBE4BO95155 1302 aa11.28□□□□□ -0.6
BRD7-201ENST00000394688 PRPSAP2O60256 369 aa11.28□□□□□ -0.6
BRD7-201ENST00000394688 STK10O94804 968 aaKnown RBP11.28□□□□□ -0.6
BRD7-201ENST00000394688 DDNO94850 711 aaPredicted RBP11.28□□□□□ -0.6
BRD7-201ENST00000394688 MOCS2O96007 188 aaPredicted RBP11.28□□□□□ -0.6
BRD7-201ENST00000394688 VCAM1P19320 739 aa11.28□□□□□ -0.6
BRD7-201ENST00000394688 POLR2BP30876 1174 aaKnown RBP11.28□□□□□ -0.6
BRD7-201ENST00000394688 CDH8P55286 799 aa11.28□□□□□ -0.6
BRD7-201ENST00000394688 C3orf62Q6ZUJ4 267 aa11.28□□□□□ -0.6
BRD7-201ENST00000394688 GPD1LQ8N335 351 aa11.28□□□□□ -0.6
BRD7-201ENST00000394688 NMD3Q96D46 503 aaKnown RBP11.28□□□□□ -0.6
BRD7-201ENST00000394688 SLC38A10Q9HBR0 1119 aa11.28□□□□□ -0.6
BRD7-201ENST00000394688 MCM8Q9UJA3 840 aa11.28□□□□□ -0.6
BRD7-201ENST00000394688 IFT172Q9UG01 1749 aa11.28□□□□□ -0.6
BRD7-201ENST00000394688 LGSNQ5TDP6 509 aa11.28□□□□□ -0.6
BRD7-201ENST00000394688 RWDD4Q6NW29 188 aaKnown RBP11.28□□□□□ -0.6
BRD7-201ENST00000394688 RAPH1Q70E73 1250 aa11.28□□□□□ -0.6
BRD7-201ENST00000394688 RYBPQ8N488 228 aaPredicted RBP11.28□□□□□ -0.6
BRD7-201ENST00000394688 ZNF280CQ8ND82 737 aa11.28□□□□□ -0.6
BRD7-201ENST00000394688 RBM46Q8TBY0 533 aaKnown RBP11.28□□□□□ -0.6
BRD7-201ENST00000394688 LRRC15Q8TF66 581 aa11.28□□□□□ -0.6
BRD7-201ENST00000394688 ALG3Q92685 438 aa11.28□□□□□ -0.6
BRD7-201ENST00000394688 TNFRSF25Q93038 417 aa11.28□□□□□ -0.6
BRD7-201ENST00000394688 SLC35C1Q96A29 364 aa11.28□□□□□ -0.6
BRD7-201ENST00000394688 MCF2LO15068 1137 aa11.27□□□□□ -0.6
BRD7-201ENST00000394688 ONECUT3O60422 494 aaPredicted RBP11.27□□□□□ -0.6
BRD7-201ENST00000394688 CDH16O75309 829 aa11.27□□□□□ -0.6
BRD7-201ENST00000394688 SEC24DO94855 1032 aaPredicted RBP11.27□□□□□ -0.6
BRD7-201ENST00000394688 CDH6P55285 790 aa11.27□□□□□ -0.6
BRD7-201ENST00000394688 LY6KQ17RY6 165 aa11.27□□□□□ -0.6
BRD7-201ENST00000394688 FBXO16Q8IX29 292 aaPredicted RBP11.27□□□□□ -0.6
BRD7-201ENST00000394688 RBBP8NLQ8NC74 664 aaPredicted RBP11.27□□□□□ -0.6
BRD7-201ENST00000394688 TRAIPQ9BWF2 469 aa11.27□□□□□ -0.6
BRD7-201ENST00000394688 SUDS3Q9H7L9 328 aaPredicted RBP11.27□□□□□ -0.6
BRD7-201ENST00000394688 NDE1Q9NXR1 346 aa11.27□□□□□ -0.6
BRD7-201ENST00000394688 AGAP1Q9UPQ3 857 aa11.27□□□□□ -0.6
BRD7-201ENST00000394688 SPECC1L-ADORA2AF8WAN1 911 aa11.27□□□□□ -0.6
BRD7-201ENST00000394688 NDC80O14777 642 aa11.27□□□□□ -0.6
BRD7-201ENST00000394688 SHOX2O60902 331 aaPredicted RBP11.27□□□□□ -0.6
BRD7-201ENST00000394688 TMEM253P0C7T8 217 aa11.27□□□□□ -0.6
BRD7-201ENST00000394688 ACTR2P61160 394 aa11.27□□□□□ -0.6
BRD7-201ENST00000394688 IRX1P78414 480 aaPredicted RBP11.27□□□□□ -0.6
BRD7-201ENST00000394688 FIGNQ5HY92 759 aa11.27□□□□□ -0.6
BRD7-201ENST00000394688 TWF2Q6IBS0 349 aaKnown RBP11.27□□□□□ -0.6
BRD7-201ENST00000394688 BZW1Q7L1Q6 419 aaKnown RBP11.27□□□□□ -0.6
BRD7-201ENST00000394688 ZNF720Q7Z2F6 126 aa11.27□□□□□ -0.6
BRD7-201ENST00000394688 C4orf32Q8N8J7 132 aa11.27□□□□□ -0.6
BRD7-201ENST00000394688 TMEM121Q9BTD3 319 aa11.27□□□□□ -0.6
BRD7-201ENST00000394688 TSSK1BQ9BXA7 367 aa11.27□□□□□ -0.6
BRD7-201ENST00000394688 WNT8AQ9H1J5 351 aa11.27□□□□□ -0.6
BRD7-201ENST00000394688 DHX35Q9H5Z1 703 aaKnown RBP11.27□□□□□ -0.6
BRD7-201ENST00000394688 PAPOLBQ9NRJ5 636 aaKnown RBP11.27□□□□□ -0.6
BRD7-201ENST00000394688 RTN2O75298 545 aa11.27□□□□□ -0.61
BRD7-201ENST00000394688 ZBED1O96006 694 aa11.27□□□□□ -0.61
BRD7-201ENST00000394688 CASP2P42575 452 aa11.27□□□□□ -0.61
BRD7-201ENST00000394688 CDK17Q00537 523 aa11.27□□□□□ -0.61
BRD7-201ENST00000394688 ATP13A4Q4VNC1 1196 aa11.27□□□□□ -0.61
BRD7-201ENST00000394688 HGSNATQ68CP4 663 aa11.27□□□□□ -0.61
BRD7-201ENST00000394688 NLRP9Q7RTR0 991 aa11.27□□□□□ -0.61
BRD7-201ENST00000394688 CEP120Q8N960 986 aa11.27□□□□□ -0.61
BRD7-201ENST00000394688 MCPH1Q8NEM0 835 aa11.27□□□□□ -0.61
BRD7-201ENST00000394688 PRPF31Q8WWY3 499 aaKnown RBP11.27□□□□□ -0.61
BRD7-201ENST00000394688 SREK1Q8WXA9 508 aaKnown RBP11.27□□□□□ -0.61
BRD7-201ENST00000394688 DNAJC19Q96DA6 116 aa11.27□□□□□ -0.61
BRD7-201ENST00000394688 MTMR9Q96QG7 549 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms