RNA–Protein interactions for RNA: ENST00000394609.6

RTN4-205, Transcript of reticulon 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN4, Length 1,898 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-205ENST00000394609 DHX38Q92620 1227 aaKnown RBP7.45□□□□□ -1.22
RTN4-205ENST00000394609 NT5C1BQ96P26 610 aa7.45□□□□□ -1.22
RTN4-205ENST00000394609 PACSIN1Q9BY11 444 aa7.45□□□□□ -1.22
RTN4-205ENST00000394609 CDT1Q9H211 546 aa7.45□□□□□ -1.22
RTN4-205ENST00000394609 ADAMTS10Q9H324 1103 aa7.45□□□□□ -1.22
RTN4-205ENST00000394609 PRMT7Q9NVM4 692 aaPredicted RBP7.45□□□□□ -1.22
RTN4-205ENST00000394609 HDAC6Q9UBN7 1215 aa7.45□□□□□ -1.22
RTN4-205ENST00000394609 CPSF3Q9UKF6 684 aaKnown RBP7.45□□□□□ -1.22
RTN4-205ENST00000394609 L1RE1Q9UN81 338 aa7.45□□□□□ -1.22
RTN4-205ENST00000394609 TNFSF13BQ9Y275 285 aa7.45□□□□□ -1.22
RTN4-205ENST00000394609 BZW2Q9Y6E2 419 aaKnown RBP7.45□□□□□ -1.22
RTN4-205ENST00000394609 DNAH12Q6ZR08 3092 aa7.45□□□□□ -1.22
RTN4-205ENST00000394609 ZNF236Q9UL36 1845 aa7.45□□□□□ -1.22
RTN4-205ENST00000394609 ATXN2Q99700 1313 aaKnown RBP7.45□□□□□ -1.22
RTN4-205ENST00000394609 MBLAC1A4D2B0 266 aaPredicted RBP7.45□□□□□ -1.22
RTN4-205ENST00000394609 TMCO5BA8MYB1 307 aa7.45□□□□□ -1.22
RTN4-205ENST00000394609 DDX3XO00571 662 aaKnown RBP eCLIP7.45□□□□□ -1.22
RTN4-205ENST00000394609 ENC1O14682 589 aa7.45□□□□□ -1.22
RTN4-205ENST00000394609 CYP26A1O43174 497 aa7.45□□□□□ -1.22
RTN4-205ENST00000394609 TSPAN1O60635 241 aa7.45□□□□□ -1.22
RTN4-205ENST00000394609 GPR32O75388 356 aa7.45□□□□□ -1.22
RTN4-205ENST00000394609 ERLIN2O94905 339 aa7.45□□□□□ -1.22
RTN4-205ENST00000394609 CST3P01034 146 aaPredicted RBP7.45□□□□□ -1.22
RTN4-205ENST00000394609 STAG3L1P0CL83 205 aa7.45□□□□□ -1.22
RTN4-205ENST00000394609 CXCL8P10145 99 aa7.45□□□□□ -1.22
RTN4-205ENST00000394609 RARBP10826 455 aa7.45□□□□□ -1.22
RTN4-205ENST00000394609 RFX1P22670 979 aa7.45□□□□□ -1.22
RTN4-205ENST00000394609 PRKCIP41743 596 aa7.45□□□□□ -1.22
RTN4-205ENST00000394609 AARSP49588 968 aaKnown RBP eCLIP7.45□□□□□ -1.22
RTN4-205ENST00000394609 MFAP3P55082 362 aa7.45□□□□□ -1.22
RTN4-205ENST00000394609 ADAM17P78536 824 aa7.45□□□□□ -1.22
RTN4-205ENST00000394609 TFAMQ00059 246 aaKnown RBP7.45□□□□□ -1.22
RTN4-205ENST00000394609 DHX9Q08211 1270 aaKnown RBP7.45□□□□□ -1.22
RTN4-205ENST00000394609 FAM187BQ17R55 369 aa7.45□□□□□ -1.22
RTN4-205ENST00000394609 ALKBH5Q6P6C2 394 aaKnown RBP7.45□□□□□ -1.22
RTN4-205ENST00000394609 C10orf67Q8IYJ2 551 aa7.45□□□□□ -1.22
RTN4-205ENST00000394609 TMEM130Q8N3G9 435 aa7.45□□□□□ -1.22
RTN4-205ENST00000394609 SLC20A1Q8WUM9 679 aa7.45□□□□□ -1.22
RTN4-205ENST00000394609 OSMRQ99650 979 aa7.45□□□□□ -1.22
RTN4-205ENST00000394609 CGRRF1Q99675 332 aa7.45□□□□□ -1.22
RTN4-205ENST00000394609 MTMR12Q9C0I1 747 aa7.45□□□□□ -1.22
RTN4-205ENST00000394609 PDZD7Q9H5P4 517 aa7.45□□□□□ -1.22
RTN4-205ENST00000394609 SEPT11Q9NVA2 429 aaKnown RBP7.45□□□□□ -1.22
RTN4-205ENST00000394609 SALL4Q9UJQ4 1053 aa7.45□□□□□ -1.22
RTN4-205ENST00000394609 DNMT3LQ9UJW3 386 aa7.45□□□□□ -1.22
RTN4-205ENST00000394609 CDC23Q9UJX2 597 aa7.45□□□□□ -1.22
RTN4-205ENST00000394609 A0A087WUV0 522 aaPredicted RBP7.44□□□□□ -1.22
RTN4-205ENST00000394609 SMIM35A0A1B0GVV1 85 aa7.44□□□□□ -1.22
RTN4-205ENST00000394609 C17orf102A2RUQ5 167 aa7.44□□□□□ -1.22
RTN4-205ENST00000394609 CTAGE9A4FU28 777 aa7.44□□□□□ -1.22
RTN4-205ENST00000394609 TTLL8A6PVC2 850 aa7.44□□□□□ -1.22
RTN4-205ENST00000394609 SEPT4O43236 478 aa7.44□□□□□ -1.22
RTN4-205ENST00000394609 BUB1O43683 1085 aa7.44□□□□□ -1.22
RTN4-205ENST00000394609 SEC31AO94979 1220 aaKnown RBP7.44□□□□□ -1.22
RTN4-205ENST00000394609 MOCS3O95396 460 aa7.44□□□□□ -1.22
RTN4-205ENST00000394609 SGPL1O95470 568 aa7.44□□□□□ -1.22
RTN4-205ENST00000394609 CALCAP01258 141 aa7.44□□□□□ -1.22
RTN4-205ENST00000394609 YY1P25490 414 aa7.44□□□□□ -1.22
RTN4-205ENST00000394609 NAP1L1P55209 391 aaKnown RBP7.44□□□□□ -1.22
RTN4-205ENST00000394609 GJA9P57773 515 aa7.44□□□□□ -1.22
RTN4-205ENST00000394609 ENPEPQ07075 957 aa7.44□□□□□ -1.22
RTN4-205ENST00000394609 NCOA4Q13772 614 aa7.44□□□□□ -1.22
RTN4-205ENST00000394609 WHAMMP3Q1A5X7 153 aa7.44□□□□□ -1.22
RTN4-205ENST00000394609 HSP90B2PQ58FF3 399 aa7.44□□□□□ -1.22
RTN4-205ENST00000394609 WDR44Q5JSH3 913 aa7.44□□□□□ -1.22
RTN4-205ENST00000394609 WDR93Q6P2C0 686 aa7.44□□□□□ -1.22
RTN4-205ENST00000394609 CCDC91Q7Z6B0 441 aa7.44□□□□□ -1.22
RTN4-205ENST00000394609 SLC47A2Q86VL8 602 aa7.44□□□□□ -1.22
RTN4-205ENST00000394609 VPS36Q86VN1 386 aa7.44□□□□□ -1.22
RTN4-205ENST00000394609 PALB2Q86YC2 1186 aa7.44□□□□□ -1.22
RTN4-205ENST00000394609 LNX1Q8TBB1 728 aaPredicted RBP7.44□□□□□ -1.22
RTN4-205ENST00000394609 U2AF1L4Q8WU68 220 aaKnown RBP7.44□□□□□ -1.22
RTN4-205ENST00000394609 SECISBP2LQ93073 1101 aaKnown RBP7.44□□□□□ -1.22
RTN4-205ENST00000394609 GCOM2Q9BZD3 368 aaPredicted RBP7.44□□□□□ -1.22
RTN4-205ENST00000394609 RPF1Q9H9Y2 349 aaKnown RBP7.44□□□□□ -1.22
RTN4-205ENST00000394609 SPC25Q9HBM1 224 aa7.44□□□□□ -1.22
RTN4-205ENST00000394609 APOBEC3GQ9HC16 384 aaKnown RBP7.44□□□□□ -1.22
RTN4-205ENST00000394609 XPNPEP3Q9NQH7 507 aa7.44□□□□□ -1.22
RTN4-205ENST00000394609 C1orf112Q9NSG2 853 aa7.44□□□□□ -1.22
RTN4-205ENST00000394609 NAGPAQ9UK23 515 aa7.44□□□□□ -1.22
RTN4-205ENST00000394609 UMODL1Q5DID0 1318 aa7.43□□□□□ -1.22
RTN4-205ENST00000394609 CEP350Q5VT06 3117 aa7.43□□□□□ -1.22
RTN4-205ENST00000394609 A0A1B0GUA9 196 aa7.43□□□□□ -1.22
RTN4-205ENST00000394609 H3BQF6 201 aa7.43□□□□□ -1.22
RTN4-205ENST00000394609 MEFVO15553 781 aaPredicted RBP7.43□□□□□ -1.22
RTN4-205ENST00000394609 TFRCP02786 760 aaKnown RBP7.43□□□□□ -1.22
RTN4-205ENST00000394609 CCDC172P0C7W6 258 aa7.43□□□□□ -1.22
RTN4-205ENST00000394609 MCF2P10911 925 aa7.43□□□□□ -1.22
RTN4-205ENST00000394609 KRT5P13647 590 aa7.43□□□□□ -1.22
RTN4-205ENST00000394609 TNFAIP3P21580 790 aa7.43□□□□□ -1.22
RTN4-205ENST00000394609 HOXA11P31270 313 aaPredicted RBP7.43□□□□□ -1.22
RTN4-205ENST00000394609 NAB2Q15742 525 aa7.43□□□□□ -1.22
RTN4-205ENST00000394609 DUOXA2Q1HG44 320 aa7.43□□□□□ -1.22
RTN4-205ENST00000394609 NBPF20Q3BBV1 942 aa7.43□□□□□ -1.22
RTN4-205ENST00000394609 FAM47CQ5HY64 1035 aa7.43□□□□□ -1.22
RTN4-205ENST00000394609 MMS22LQ6ZRQ5 1243 aa7.43□□□□□ -1.22
RTN4-205ENST00000394609 ZNF662Q6ZS27 426 aa7.43□□□□□ -1.22
RTN4-205ENST00000394609 CATSPER4Q7RTX7 472 aa7.43□□□□□ -1.22
RTN4-205ENST00000394609 TRAPPC11Q7Z392 1133 aa7.43□□□□□ -1.22
RTN4-205ENST00000394609 ZNF410Q86VK4 478 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms