RNA–Protein interactions for RNA: ENST00000394601.8

PTBP1-204, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene PTBP1, Length 3,185 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-204ENST00000394601 DNAJC8O75937 253 aaPredicted RBP16.48■□□□□ 0.23
PTBP1-204ENST00000394601 PIGRP01833 764 aa16.48■□□□□ 0.23
PTBP1-204ENST00000394601 RRM1P23921 792 aa16.48■□□□□ 0.23
PTBP1-204ENST00000394601 NBPF20Q3BBV1 942 aa16.48■□□□□ 0.23
PTBP1-204ENST00000394601 SPOPLQ6IQ16 392 aa16.48■□□□□ 0.23
PTBP1-204ENST00000394601 CYFIP1Q7L576 1253 aa16.48■□□□□ 0.23
PTBP1-204ENST00000394601 MICALL2Q8IY33 904 aa16.48■□□□□ 0.23
PTBP1-204ENST00000394601 ASAP3Q8TDY4 903 aa16.48■□□□□ 0.23
PTBP1-204ENST00000394601 NSUN6Q8TEA1 469 aaKnown RBP16.48■□□□□ 0.23
PTBP1-204ENST00000394601 ATP6V0A1Q93050 837 aa16.48■□□□□ 0.23
PTBP1-204ENST00000394601 CENPTQ96BT3 561 aa16.48■□□□□ 0.23
PTBP1-204ENST00000394601 KDM4CQ9H3R0 1056 aa16.48■□□□□ 0.23
PTBP1-204ENST00000394601 BATF3Q9NR55 127 aa16.48■□□□□ 0.23
PTBP1-204ENST00000394601 CNTN6Q9UQ52 1028 aa16.48■□□□□ 0.23
PTBP1-204ENST00000394601 PSAPP07602 524 aa16.48■□□□□ 0.23
PTBP1-204ENST00000394601 RPS12P25398 132 aaKnown RBP16.48■□□□□ 0.23
PTBP1-204ENST00000394601 MSH2P43246 934 aa16.48■□□□□ 0.23
PTBP1-204ENST00000394601 C2CD6Q53TS8 623 aa16.48■□□□□ 0.23
PTBP1-204ENST00000394601 MCPH1Q8NEM0 835 aa16.48■□□□□ 0.23
PTBP1-204ENST00000394601 CPA5Q8WXQ8 436 aa16.48■□□□□ 0.23
PTBP1-204ENST00000394601 TAOK3Q9H2K8 898 aa16.48■□□□□ 0.23
PTBP1-204ENST00000394601 CHST7Q9NS84 486 aa16.48■□□□□ 0.23
PTBP1-204ENST00000394601 NKX1-2Q9UD57 310 aaPredicted RBP16.48■□□□□ 0.23
PTBP1-204ENST00000394601 C2CD2Q9Y426 696 aa16.48■□□□□ 0.23
PTBP1-204ENST00000394601 CNTNAP2Q9UHC6 1331 aa16.47■□□□□ 0.23
PTBP1-204ENST00000394601 RAB27AP51159 221 aa16.47■□□□□ 0.23
PTBP1-204ENST00000394601 HMGCS2P54868 508 aa16.47■□□□□ 0.23
PTBP1-204ENST00000394601 LONRF1Q17RB8 773 aa16.47■□□□□ 0.23
PTBP1-204ENST00000394601 C11orf91Q3C1V1 193 aa16.47■□□□□ 0.23
PTBP1-204ENST00000394601 ENOSF1Q7L5Y1 443 aa16.47■□□□□ 0.23
PTBP1-204ENST00000394601 B4GALNT2Q8NHY0 566 aa16.47■□□□□ 0.23
PTBP1-204ENST00000394601 FBF1Q8TES7 1133 aa16.47■□□□□ 0.23
PTBP1-204ENST00000394601 ZBTB45Q96K62 511 aaPredicted RBP16.47■□□□□ 0.23
PTBP1-204ENST00000394601 DHX33Q9H6R0 707 aaKnown RBP16.47■□□□□ 0.23
PTBP1-204ENST00000394601 EBF2Q9HAK2 575 aa16.47■□□□□ 0.23
PTBP1-204ENST00000394601 PIM2Q9P1W9 311 aa16.47■□□□□ 0.23
PTBP1-204ENST00000394601 RASAL2Q9UJF2 1139 aa16.47■□□□□ 0.23
PTBP1-204ENST00000394601 IGKV6D-21A0A0A0MT36 114 aa16.47■□□□□ 0.23
PTBP1-204ENST00000394601 SPOPO43791 374 aa16.47■□□□□ 0.23
PTBP1-204ENST00000394601 RARGP13631 454 aa16.47■□□□□ 0.23
PTBP1-204ENST00000394601 GMPSP49915 693 aaPredicted RBP16.47■□□□□ 0.23
PTBP1-204ENST00000394601 NCALDP61601 193 aa16.47■□□□□ 0.23
PTBP1-204ENST00000394601 MUM1Q2TAK8 710 aa16.47■□□□□ 0.23
PTBP1-204ENST00000394601 PRAMEF18Q5VWM3 479 aa16.47■□□□□ 0.23
PTBP1-204ENST00000394601 CDCA2Q69YH5 1023 aaPredicted RBP16.47■□□□□ 0.23
PTBP1-204ENST00000394601 CATSPERGQ6ZRH7 1159 aa16.47■□□□□ 0.23
PTBP1-204ENST00000394601 DDX50Q9BQ39 737 aaKnown RBP16.47■□□□□ 0.23
PTBP1-204ENST00000394601 FAM129AQ9BZQ8 928 aa16.47■□□□□ 0.23
PTBP1-204ENST00000394601 SEPT9Q9UHD8 586 aaPredicted RBP16.47■□□□□ 0.23
PTBP1-204ENST00000394601 FAM189A1O60320 539 aa16.46■□□□□ 0.23
PTBP1-204ENST00000394601 SORBS3O60504 671 aa16.46■□□□□ 0.23
PTBP1-204ENST00000394601 SUPT20HL2P0C7V6 817 aa16.46■□□□□ 0.23
PTBP1-204ENST00000394601 GLRA2P23416 452 aa16.46■□□□□ 0.23
PTBP1-204ENST00000394601 ARL2P36404 184 aa16.46■□□□□ 0.23
PTBP1-204ENST00000394601 SUPT20HL1Q3ZLR7 823 aa16.46■□□□□ 0.23
PTBP1-204ENST00000394601 PPP1R15BQ5SWA1 713 aa16.46■□□□□ 0.23
PTBP1-204ENST00000394601 ISLR2Q6UXK2 745 aa16.46■□□□□ 0.23
PTBP1-204ENST00000394601 UBR7Q8N806 425 aa16.46■□□□□ 0.23
PTBP1-204ENST00000394601 MAB21L3Q8N8X9 362 aa16.46■□□□□ 0.23
PTBP1-204ENST00000394601 DTX3LQ8TDB6 740 aa16.46■□□□□ 0.23
PTBP1-204ENST00000394601 C1orf54Q8WWF1 131 aa16.46■□□□□ 0.23
PTBP1-204ENST00000394601 PCYT2Q99447 389 aa16.46■□□□□ 0.23
PTBP1-204ENST00000394601 ANAPC7Q9UJX3 599 aa16.46■□□□□ 0.23
PTBP1-204ENST00000394601 R3HDM2Q9Y2K5 976 aaKnown RBP16.46■□□□□ 0.23
PTBP1-204ENST00000394601 SCNN1BP51168 640 aa16.46■□□□□ 0.23
PTBP1-204ENST00000394601 POTEAQ6S8J7 498 aa16.46■□□□□ 0.23
PTBP1-204ENST00000394601 CAPN12Q6ZSI9 719 aa16.46■□□□□ 0.23
PTBP1-204ENST00000394601 SLC5A4Q9NY91 659 aa16.46■□□□□ 0.23
PTBP1-204ENST00000394601 PCDHB2Q9Y5E7 798 aa16.46■□□□□ 0.23
PTBP1-204ENST00000394601 HLA-DRAP01903 254 aa16.46■□□□□ 0.22
PTBP1-204ENST00000394601 TARSP26639 723 aaKnown RBP16.46■□□□□ 0.22
PTBP1-204ENST00000394601 GBP1P32455 592 aa16.46■□□□□ 0.22
PTBP1-204ENST00000394601 EMC2Q15006 297 aa16.46■□□□□ 0.22
PTBP1-204ENST00000394601 ZNF677Q86XU0 584 aa16.46■□□□□ 0.22
PTBP1-204ENST00000394601 PORCNQ9H237 461 aa16.46■□□□□ 0.22
PTBP1-204ENST00000394601 TTLL13PA6NNM8 815 aa16.45■□□□□ 0.22
PTBP1-204ENST00000394601 CHKAP35790 457 aa16.45■□□□□ 0.22
PTBP1-204ENST00000394601 ACOT2P49753 483 aa16.45■□□□□ 0.22
PTBP1-204ENST00000394601 AUHQ13825 339 aaKnown RBP16.45■□□□□ 0.22
PTBP1-204ENST00000394601 ATG4AQ8WYN0 398 aa16.45■□□□□ 0.22
PTBP1-204ENST00000394601 ANK1P16157 1881 aa16.45■□□□□ 0.22
PTBP1-204ENST00000394601 SPDYE16A6NNV3 312 aaPredicted RBP16.45■□□□□ 0.22
PTBP1-204ENST00000394601 KRT5P13647 590 aa16.45■□□□□ 0.22
PTBP1-204ENST00000394601 ICAM3P32942 547 aa16.45■□□□□ 0.22
PTBP1-204ENST00000394601 TGFB2P61812 414 aa16.45■□□□□ 0.22
PTBP1-204ENST00000394601 LMNTD2Q8IXW0 634 aa16.45■□□□□ 0.22
PTBP1-204ENST00000394601 CCDC105Q8IYK2 499 aa16.45■□□□□ 0.22
PTBP1-204ENST00000394601 TMEM143Q96AN5 459 aa16.45■□□□□ 0.22
PTBP1-204ENST00000394601 NSRP1Q9H0G5 558 aaKnown RBP16.45■□□□□ 0.22
PTBP1-204ENST00000394601 WHRNQ9P202 907 aa16.45■□□□□ 0.22
PTBP1-204ENST00000394601 FZD9O00144 591 aa16.44■□□□□ 0.22
PTBP1-204ENST00000394601 XKR3Q5GH77 459 aa16.44■□□□□ 0.22
PTBP1-204ENST00000394601 MFSD5Q6N075 450 aa16.44■□□□□ 0.22
PTBP1-204ENST00000394601 PHLDB2Q86SQ0 1253 aa16.44■□□□□ 0.22
PTBP1-204ENST00000394601 ZNF513Q8N8E2 541 aaPredicted RBP16.44■□□□□ 0.22
PTBP1-204ENST00000394601 ADAM22Q9P0K1 906 aa16.44■□□□□ 0.22
PTBP1-204ENST00000394601 CTNNAL1Q9UBT7 734 aa16.44■□□□□ 0.22
PTBP1-204ENST00000394601 GH1P01241 217 aa16.44■□□□□ 0.22
PTBP1-204ENST00000394601 MAPK4P31152 587 aa16.44■□□□□ 0.22
PTBP1-204ENST00000394601 ZNF132P52740 706 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms