RNA–Protein interactions for RNA: ENST00000394272.7

HDDC3-202, Transcript of HD domain containing 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene HDDC3, Length 1,880 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-202ENST00000394272 CLEC16AQ2KHT3 1053 aa21.68■■□□□ 1.06
HDDC3-202ENST00000394272 ZNF394Q53GI3 561 aa21.68■■□□□ 1.06
HDDC3-202ENST00000394272 TRIM58Q8NG06 486 aa21.68■■□□□ 1.06
HDDC3-202ENST00000394272 ZNF606Q8WXB4 792 aa21.68■■□□□ 1.06
HDDC3-202ENST00000394272 NOX5Q96PH1 765 aa21.68■■□□□ 1.06
HDDC3-202ENST00000394272 SLC38A7Q9NVC3 462 aa21.68■■□□□ 1.06
HDDC3-202ENST00000394272 MIOSQ9NXC5 875 aa21.68■■□□□ 1.06
HDDC3-202ENST00000394272 TDRD15B5MCY1 1934 aaKnown RBP21.68■■□□□ 1.06
HDDC3-202ENST00000394272 TET1Q8NFU7 2136 aa21.68■■□□□ 1.06
HDDC3-202ENST00000394272 KIAA0100Q14667 2235 aaKnown RBP21.68■■□□□ 1.06
HDDC3-202ENST00000394272 NCANO14594 1321 aa21.67■■□□□ 1.06
HDDC3-202ENST00000394272 BUB1O43683 1085 aa21.67■■□□□ 1.06
HDDC3-202ENST00000394272 NBNO60934 754 aa21.67■■□□□ 1.06
HDDC3-202ENST00000394272 TACC1O75410 805 aa21.67■■□□□ 1.06
HDDC3-202ENST00000394272 CYP1A1P04798 512 aaPredicted RBP21.67■■□□□ 1.06
HDDC3-202ENST00000394272 C1orf53Q5VUE5 145 aa21.67■■□□□ 1.06
HDDC3-202ENST00000394272 ECHDC2Q86YB7 292 aa21.67■■□□□ 1.06
HDDC3-202ENST00000394272 LINC01599Q8WXQ3 324 aa21.67■■□□□ 1.06
HDDC3-202ENST00000394272 PGBD4Q96DM1 585 aa21.67■■□□□ 1.06
HDDC3-202ENST00000394272 RPS6KC1Q96S38 1066 aa21.67■■□□□ 1.06
HDDC3-202ENST00000394272 RSAD1Q9HA92 442 aa21.67■■□□□ 1.06
HDDC3-202ENST00000394272 C9IYK1 514 aa21.66■■□□□ 1.06
HDDC3-202ENST00000394272 THAP12O43422 761 aa21.66■■□□□ 1.06
HDDC3-202ENST00000394272 PNPLA4P41247 253 aa21.66■■□□□ 1.06
HDDC3-202ENST00000394272 RAD23BP54727 409 aa21.66■■□□□ 1.06
HDDC3-202ENST00000394272 TTC39CQ8N584 583 aa21.66■■□□□ 1.06
HDDC3-202ENST00000394272 CTNNBL1Q8WYA6 563 aaPredicted RBP21.66■■□□□ 1.06
HDDC3-202ENST00000394272 ZNF560Q96MR9 790 aa21.66■■□□□ 1.06
HDDC3-202ENST00000394272 TOX2Q96NM4 488 aa21.66■■□□□ 1.06
HDDC3-202ENST00000394272 TWNKQ96RR1 684 aa21.66■■□□□ 1.06
HDDC3-202ENST00000394272 NAPGQ99747 312 aaPredicted RBP21.66■■□□□ 1.06
HDDC3-202ENST00000394272 ZSWIM1Q9BR11 485 aa21.66■■□□□ 1.06
HDDC3-202ENST00000394272 THAP2Q9H0W7 228 aa21.66■■□□□ 1.06
HDDC3-202ENST00000394272 BARX2Q9UMQ3 279 aaPredicted RBP21.66■■□□□ 1.06
HDDC3-202ENST00000394272 SNX9Q9Y5X1 595 aa21.66■■□□□ 1.06
HDDC3-202ENST00000394272 CTAGE9A4FU28 777 aa21.66■■□□□ 1.06
HDDC3-202ENST00000394272 THP07101 528 aa21.66■■□□□ 1.06
HDDC3-202ENST00000394272 CFHP08603 1231 aa21.66■■□□□ 1.06
HDDC3-202ENST00000394272 PAEPP09466 180 aa21.66■■□□□ 1.06
HDDC3-202ENST00000394272 ABCB4P21439 1286 aa21.66■■□□□ 1.06
HDDC3-202ENST00000394272 GJA8P48165 433 aa21.66■■□□□ 1.06
HDDC3-202ENST00000394272 ACAD10Q6JQN1 1059 aa21.66■■□□□ 1.06
HDDC3-202ENST00000394272 TRIM72Q6ZMU5 477 aa21.66■■□□□ 1.06
HDDC3-202ENST00000394272 MMS19Q96T76 1030 aa21.66■■□□□ 1.06
HDDC3-202ENST00000394272 FTHL17Q9BXU8 183 aa21.66■■□□□ 1.06
HDDC3-202ENST00000394272 TSPYL2Q9H2G4 693 aaPredicted RBP21.66■■□□□ 1.06
HDDC3-202ENST00000394272 L2HGDHQ9H9P8 463 aa21.66■■□□□ 1.06
HDDC3-202ENST00000394272 UBN1Q9NPG3 1134 aa21.66■■□□□ 1.06
HDDC3-202ENST00000394272 GDAP2Q9NXN4 497 aa21.66■■□□□ 1.06
HDDC3-202ENST00000394272 HMGXB4Q9UGU5 601 aa21.66■■□□□ 1.06
HDDC3-202ENST00000394272 PCDHGC5Q9Y5F6 944 aa21.66■■□□□ 1.06
HDDC3-202ENST00000394272 GTF3C5Q9Y5Q8 519 aaPredicted RBP21.66■■□□□ 1.06
HDDC3-202ENST00000394272 SCN5AQ14524 2016 aa21.66■■□□□ 1.06
HDDC3-202ENST00000394272 SPTLC1O15269 473 aa21.65■■□□□ 1.06
HDDC3-202ENST00000394272 CTCFP49711 727 aaPredicted RBP21.65■■□□□ 1.06
HDDC3-202ENST00000394272 SCNN1GP51170 649 aa21.65■■□□□ 1.06
HDDC3-202ENST00000394272 SLC24A5Q71RS6 500 aa21.65■■□□□ 1.06
HDDC3-202ENST00000394272 SLC4A11Q8NBS3 891 aa21.65■■□□□ 1.06
HDDC3-202ENST00000394272 DIS3LQ8TF46 1054 aaKnown RBP21.65■■□□□ 1.06
HDDC3-202ENST00000394272 RFFLQ8WZ73 363 aa21.65■■□□□ 1.06
HDDC3-202ENST00000394272 ARHGEF26Q96DR7 871 aa21.65■■□□□ 1.06
HDDC3-202ENST00000394272 ALS2CR12Q96Q35 445 aa21.65■■□□□ 1.06
HDDC3-202ENST00000394272 ELOVL4Q9GZR5 314 aa21.65■■□□□ 1.06
HDDC3-202ENST00000394272 BRD2P25440 801 aaKnown RBP21.64■■□□□ 1.06
HDDC3-202ENST00000394272 TAF6P49848 677 aa21.64■■□□□ 1.06
HDDC3-202ENST00000394272 FAM189BP81408 668 aa21.64■■□□□ 1.06
HDDC3-202ENST00000394272 CENPCQ03188 943 aa21.64■■□□□ 1.06
HDDC3-202ENST00000394272 FAAP100Q0VG06 881 aa21.64■■□□□ 1.06
HDDC3-202ENST00000394272 PLEKHG4Q58EX7 1191 aa21.64■■□□□ 1.06
HDDC3-202ENST00000394272 ANKLE1Q8NAG6 615 aa21.64■■□□□ 1.06
HDDC3-202ENST00000394272 RNF169Q8NCN4 708 aa21.64■■□□□ 1.06
HDDC3-202ENST00000394272 TFAP2BQ92481 460 aa21.64■■□□□ 1.06
HDDC3-202ENST00000394272 CYFIP2Q96F07 1278 aa21.64■■□□□ 1.06
HDDC3-202ENST00000394272 PUF60Q9UHX1 559 aaKnown RBP21.64■■□□□ 1.06
HDDC3-202ENST00000394272 FAM170AA1A519 330 aa21.64■■□□□ 1.05
HDDC3-202ENST00000394272 KPNA7A9QM74 516 aa21.64■■□□□ 1.05
HDDC3-202ENST00000394272 INPPL1O15357 1258 aa21.64■■□□□ 1.05
HDDC3-202ENST00000394272 URI1O94763 535 aaPredicted RBP21.64■■□□□ 1.05
HDDC3-202ENST00000394272 HSPA1AP0DMV8 641 aaKnown RBP21.64■■□□□ 1.05
HDDC3-202ENST00000394272 HSPA1BP0DMV9 641 aaKnown RBP21.64■■□□□ 1.05
HDDC3-202ENST00000394272 NAP1L1P55209 391 aaKnown RBP21.64■■□□□ 1.05
HDDC3-202ENST00000394272 NOMO3P69849 1222 aa21.64■■□□□ 1.05
HDDC3-202ENST00000394272 TCEAL1Q15170 157 aa21.64■■□□□ 1.05
HDDC3-202ENST00000394272 TRIM60Q495X7 471 aa21.64■■□□□ 1.05
HDDC3-202ENST00000394272 LIMS2Q7Z4I7 341 aa21.64■■□□□ 1.05
HDDC3-202ENST00000394272 TMEM176AQ96HP8 235 aa21.64■■□□□ 1.05
HDDC3-202ENST00000394272 PCDHGC3Q9UN70 934 aa21.64■■□□□ 1.05
HDDC3-202ENST00000394272 DCDC2CA8MYV0 355 aa21.63■■□□□ 1.05
HDDC3-202ENST00000394272 RIOK3O14730 519 aaKnown RBP21.63■■□□□ 1.05
HDDC3-202ENST00000394272 EOMESO95936 686 aa21.63■■□□□ 1.05
HDDC3-202ENST00000394272 LILRA4P59901 499 aa21.63■■□□□ 1.05
HDDC3-202ENST00000394272 GPC5P78333 572 aa21.63■■□□□ 1.05
HDDC3-202ENST00000394272 TLE2Q04725 743 aa21.63■■□□□ 1.05
HDDC3-202ENST00000394272 SOWAHAQ2M3V2 549 aa21.63■■□□□ 1.05
HDDC3-202ENST00000394272 SV2CQ496J9 727 aa21.63■■□□□ 1.05
HDDC3-202ENST00000394272 MRPL45Q9BRJ2 306 aaKnown RBP21.63■■□□□ 1.05
HDDC3-202ENST00000394272 PDCL3Q9H2J4 239 aa21.63■■□□□ 1.05
HDDC3-202ENST00000394272 MKI67P46013 3256 aaKnown RBP21.63■■□□□ 1.05
HDDC3-202ENST00000394272 GRID2IPA4D2P6 1211 aa21.62■■□□□ 1.05
HDDC3-202ENST00000394272 NDST1P52848 882 aa21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms