RNA–Protein interactions for RNA: ENST00000394239.7

TUBD1-205, Transcript of tubulin delta 1, humanhuman

TSL 2 BASIC

Gene TUBD1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-205ENST00000394239 SLFN11Q7Z7L1 901 aa13.19□□□□□ -0.3
TUBD1-205ENST00000394239 FBXL13Q8NEE6 735 aa13.19□□□□□ -0.3
TUBD1-205ENST00000394239 SLC20A1Q8WUM9 679 aa13.19□□□□□ -0.3
TUBD1-205ENST00000394239 NT5C1BQ96P26 610 aa13.19□□□□□ -0.3
TUBD1-205ENST00000394239 POP1Q99575 1024 aaKnown RBP13.19□□□□□ -0.3
TUBD1-205ENST00000394239 FAM213AQ9BRX8 229 aa13.19□□□□□ -0.3
TUBD1-205ENST00000394239 SELENOOQ9BVL4 669 aa13.19□□□□□ -0.3
TUBD1-205ENST00000394239 PDE11AQ9HCR9 933 aa13.19□□□□□ -0.3
TUBD1-205ENST00000394239 RGS18Q9NS28 235 aa13.19□□□□□ -0.3
TUBD1-205ENST00000394239 STIM2Q9P246 746 aa13.19□□□□□ -0.3
TUBD1-205ENST00000394239 PIN4Q9Y237 131 aaKnown RBP13.19□□□□□ -0.3
TUBD1-205ENST00000394239 COQ4Q9Y3A0 265 aa13.19□□□□□ -0.3
TUBD1-205ENST00000394239 MYH11P35749 1972 aa13.19□□□□□ -0.3
TUBD1-205ENST00000394239 REV3LO60673 3130 aa13.19□□□□□ -0.3
TUBD1-205ENST00000394239 MEIS3P2A8K0S8 358 aa13.18□□□□□ -0.3
TUBD1-205ENST00000394239 C9IYK1 514 aa13.18□□□□□ -0.3
TUBD1-205ENST00000394239 KIAA0391O15091 583 aaKnown RBP13.18□□□□□ -0.3
TUBD1-205ENST00000394239 POLR3GO15318 223 aaPredicted RBP13.18□□□□□ -0.3
TUBD1-205ENST00000394239 EXTL3O43909 919 aa13.18□□□□□ -0.3
TUBD1-205ENST00000394239 ARHGEF15O94989 841 aa13.18□□□□□ -0.3
TUBD1-205ENST00000394239 UPP2O95045 317 aa13.18□□□□□ -0.3
TUBD1-205ENST00000394239 ATP2A2P16615 1042 aaKnown RBP13.18□□□□□ -0.3
TUBD1-205ENST00000394239 UBXN11Q5T124 520 aa13.18□□□□□ -0.3
TUBD1-205ENST00000394239 FAM71AQ8IYT1 594 aa13.18□□□□□ -0.3
TUBD1-205ENST00000394239 SLC35G2Q8TBE7 412 aa13.18□□□□□ -0.3
TUBD1-205ENST00000394239 SEMA4DQ92854 862 aa13.18□□□□□ -0.3
TUBD1-205ENST00000394239 KCNN1Q92952 543 aa13.18□□□□□ -0.3
TUBD1-205ENST00000394239 KAT5Q92993 513 aa13.18□□□□□ -0.3
TUBD1-205ENST00000394239 EIF2AQ9BY44 585 aaKnown RBP13.18□□□□□ -0.3
TUBD1-205ENST00000394239 GOLPH3Q9H4A6 298 aa13.18□□□□□ -0.3
TUBD1-205ENST00000394239 VIPAS39Q9H9C1 493 aa13.18□□□□□ -0.3
TUBD1-205ENST00000394239 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.18□□□□□ -0.3
TUBD1-205ENST00000394239 TOPORSQ9NS56 1045 aaPredicted RBP13.18□□□□□ -0.3
TUBD1-205ENST00000394239 RAB20Q9NX57 234 aa13.18□□□□□ -0.3
TUBD1-205ENST00000394239 COL4A6Q14031 1691 aa13.18□□□□□ -0.3
TUBD1-205ENST00000394239 CEP104O60308 925 aa13.18□□□□□ -0.3
TUBD1-205ENST00000394239 PRKCBP05771 671 aa13.18□□□□□ -0.3
TUBD1-205ENST00000394239 ATF7P17544 494 aaPredicted RBP13.18□□□□□ -0.3
TUBD1-205ENST00000394239 GATMP50440 423 aa13.18□□□□□ -0.3
TUBD1-205ENST00000394239 TNNC1P63316 161 aa13.18□□□□□ -0.3
TUBD1-205ENST00000394239 TERF2Q15554 542 aa13.18□□□□□ -0.3
TUBD1-205ENST00000394239 EEF1DP3Q658K8 133 aa13.18□□□□□ -0.3
TUBD1-205ENST00000394239 SV2AQ7L0J3 742 aa13.18□□□□□ -0.3
TUBD1-205ENST00000394239 ZBTB8OSQ8IWT0 167 aa13.18□□□□□ -0.3
TUBD1-205ENST00000394239 TAS1R2Q8TE23 839 aa13.18□□□□□ -0.3
TUBD1-205ENST00000394239 HDAC7Q8WUI4 952 aa13.18□□□□□ -0.3
TUBD1-205ENST00000394239 SHC3Q92529 594 aa13.18□□□□□ -0.3
TUBD1-205ENST00000394239 TOP1MTQ969P6 601 aa13.18□□□□□ -0.3
TUBD1-205ENST00000394239 CALR3Q96L12 384 aaKnown RBP13.18□□□□□ -0.3
TUBD1-205ENST00000394239 KREMEN1Q96MU8 473 aa13.18□□□□□ -0.3
TUBD1-205ENST00000394239 FTHL17Q9BXU8 183 aa13.18□□□□□ -0.3
TUBD1-205ENST00000394239 THAP2Q9H0W7 228 aa13.18□□□□□ -0.3
TUBD1-205ENST00000394239 TAS2R14Q9NYV8 317 aa13.18□□□□□ -0.3
TUBD1-205ENST00000394239 DMGDHQ9UI17 866 aaKnown RBP13.18□□□□□ -0.3
TUBD1-205ENST00000394239 AMFRQ9UKV5 643 aa13.18□□□□□ -0.3
TUBD1-205ENST00000394239 TRANK1O15050 2925 aa13.18□□□□□ -0.3
TUBD1-205ENST00000394239 TTC3P53804 2025 aa13.17□□□□□ -0.3
TUBD1-205ENST00000394239 LCHNA4D1U4 455 aa13.17□□□□□ -0.3
TUBD1-205ENST00000394239 K7ERI5 159 aa13.17□□□□□ -0.3
TUBD1-205ENST00000394239 ERLIN2O94905 339 aa13.17□□□□□ -0.3
TUBD1-205ENST00000394239 RNASE9P60153 205 aaKnown RBP13.17□□□□□ -0.3
TUBD1-205ENST00000394239 FAM193AP78312 1265 aa13.17□□□□□ -0.3
TUBD1-205ENST00000394239 FAM189BP81408 668 aa13.17□□□□□ -0.3
TUBD1-205ENST00000394239 SLC7A5Q01650 507 aa13.17□□□□□ -0.3
TUBD1-205ENST00000394239 MAPK6Q16659 721 aa13.17□□□□□ -0.3
TUBD1-205ENST00000394239 PTPROQ16827 1216 aa13.17□□□□□ -0.3
TUBD1-205ENST00000394239 FAM187BQ17R55 369 aa13.17□□□□□ -0.3
TUBD1-205ENST00000394239 HSP90B2PQ58FF3 399 aa13.17□□□□□ -0.3
TUBD1-205ENST00000394239 SLFN12LQ6IEE8 588 aa13.17□□□□□ -0.3
TUBD1-205ENST00000394239 SPRED2Q7Z698 418 aa13.17□□□□□ -0.3
TUBD1-205ENST00000394239 NT5DC3Q86UY8 548 aa13.17□□□□□ -0.3
TUBD1-205ENST00000394239 PALB2Q86YC2 1186 aa13.17□□□□□ -0.3
TUBD1-205ENST00000394239 HERC6Q8IVU3 1022 aa13.17□□□□□ -0.3
TUBD1-205ENST00000394239 RHOT2Q8IXI1 618 aa13.17□□□□□ -0.3
TUBD1-205ENST00000394239 GSPT2Q8IYD1 628 aaKnown RBP13.17□□□□□ -0.3
TUBD1-205ENST00000394239 ACTRT1Q8TDG2 376 aa13.17□□□□□ -0.3
TUBD1-205ENST00000394239 HELQQ8TDG4 1101 aa13.17□□□□□ -0.3
TUBD1-205ENST00000394239 LRCH3Q96II8 777 aa13.17□□□□□ -0.3
TUBD1-205ENST00000394239 FNBP1Q96RU3 617 aa13.17□□□□□ -0.3
TUBD1-205ENST00000394239 PBX4Q9BYU1 374 aa13.17□□□□□ -0.3
TUBD1-205ENST00000394239 C2orf40Q9H1Z8 148 aa13.17□□□□□ -0.3
TUBD1-205ENST00000394239 OSGEPQ9NPF4 335 aa13.17□□□□□ -0.3
TUBD1-205ENST00000394239 STXBP5LQ9Y2K9 1186 aa13.17□□□□□ -0.3
TUBD1-205ENST00000394239 YBX2Q9Y2T7 364 aaKnown RBP13.17□□□□□ -0.3
TUBD1-205ENST00000394239 GBF1Q92538 1859 aa13.17□□□□□ -0.3
TUBD1-205ENST00000394239 CNTNAP2Q9UHC6 1331 aa13.16□□□□□ -0.3
TUBD1-205ENST00000394239 A0A1W2PPC1 479 aa13.16□□□□□ -0.3
TUBD1-205ENST00000394239 H3BQF6 201 aa13.16□□□□□ -0.3
TUBD1-205ENST00000394239 PGRMC1O00264 195 aaKnown RBP13.16□□□□□ -0.3
TUBD1-205ENST00000394239 ACKR2O00590 384 aa13.16□□□□□ -0.3
TUBD1-205ENST00000394239 CYP26A1O43174 497 aa13.16□□□□□ -0.3
TUBD1-205ENST00000394239 BUB1BO60566 1050 aaPredicted RBP13.16□□□□□ -0.3
TUBD1-205ENST00000394239 ZC3H11AO75152 810 aaKnown RBP eCLIP13.16□□□□□ -0.3
TUBD1-205ENST00000394239 GJB5O95377 273 aa13.16□□□□□ -0.3
TUBD1-205ENST00000394239 PIGRP01833 764 aa13.16□□□□□ -0.3
TUBD1-205ENST00000394239 FTLP02792 175 aaPredicted RBP13.16□□□□□ -0.3
TUBD1-205ENST00000394239 AMHP03971 560 aa13.16□□□□□ -0.3
TUBD1-205ENST00000394239 MYBL2P10244 700 aa13.16□□□□□ -0.3
TUBD1-205ENST00000394239 TNFRSF8P28908 595 aa13.16□□□□□ -0.3
TUBD1-205ENST00000394239 PDE6CP51160 858 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms