RNA–Protein interactions for RNA: ENST00000394164.5

PSEN1-204, Transcript of presenilin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PSEN1, Length 3,046 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-204ENST00000394164 LRRIQ4A6NIV6 560 aa10.54□□□□□ -0.72
PSEN1-204ENST00000394164 CCNB1P14635 433 aa10.54□□□□□ -0.72
PSEN1-204ENST00000394164 FOXN2P32314 431 aa10.54□□□□□ -0.72
PSEN1-204ENST00000394164 WNT7BP56706 349 aa10.54□□□□□ -0.72
PSEN1-204ENST00000394164 DEUP1Q05D60 604 aa10.54□□□□□ -0.72
PSEN1-204ENST00000394164 TMEM62Q0P6H9 643 aa10.54□□□□□ -0.72
PSEN1-204ENST00000394164 TMEM132BQ14DG7 1078 aa10.54□□□□□ -0.72
PSEN1-204ENST00000394164 ZBTB41Q5SVQ8 909 aa10.54□□□□□ -0.72
PSEN1-204ENST00000394164 SV2AQ7L0J3 742 aa10.54□□□□□ -0.72
PSEN1-204ENST00000394164 CYP4X1Q8N118 509 aa10.54□□□□□ -0.72
PSEN1-204ENST00000394164 RASGEF1CQ8N431 466 aa10.54□□□□□ -0.72
PSEN1-204ENST00000394164 RBBP8NLQ8NC74 664 aaPredicted RBP10.54□□□□□ -0.72
PSEN1-204ENST00000394164 ZFAND2BQ8WV99 257 aa10.54□□□□□ -0.72
PSEN1-204ENST00000394164 LPAR1Q92633 364 aa10.54□□□□□ -0.72
PSEN1-204ENST00000394164 CCDC134Q9H6E4 229 aa10.54□□□□□ -0.72
PSEN1-204ENST00000394164 DNAAF2Q9NVR5 837 aaKnown RBP10.54□□□□□ -0.72
PSEN1-204ENST00000394164 MTRF1LQ9UGC7 380 aaKnown RBP10.54□□□□□ -0.72
PSEN1-204ENST00000394164 CHKBQ9Y259 395 aa10.54□□□□□ -0.72
PSEN1-204ENST00000394164 BTNL10A8MVZ5 291 aa10.54□□□□□ -0.72
PSEN1-204ENST00000394164 PYGMP11217 842 aa10.54□□□□□ -0.72
PSEN1-204ENST00000394164 ACADSP16219 412 aa10.54□□□□□ -0.72
PSEN1-204ENST00000394164 CCNFP41002 786 aa10.54□□□□□ -0.72
PSEN1-204ENST00000394164 BACE1P56817 501 aa10.54□□□□□ -0.72
PSEN1-204ENST00000394164 GPC5P78333 572 aa10.54□□□□□ -0.72
PSEN1-204ENST00000394164 GTF2BQ00403 316 aa10.54□□□□□ -0.72
PSEN1-204ENST00000394164 PPATQ06203 517 aa10.54□□□□□ -0.72
PSEN1-204ENST00000394164 MCL1Q07820 350 aa10.54□□□□□ -0.72
PSEN1-204ENST00000394164 TNFAIP1Q13829 316 aa10.54□□□□□ -0.72
PSEN1-204ENST00000394164 KIF22Q14807 665 aa10.54□□□□□ -0.72
PSEN1-204ENST00000394164 EAPPQ56P03 285 aaPredicted RBP10.54□□□□□ -0.72
PSEN1-204ENST00000394164 SNX30Q5VWJ9 437 aa10.54□□□□□ -0.72
PSEN1-204ENST00000394164 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.54□□□□□ -0.72
PSEN1-204ENST00000394164 ZDHHC14Q8IZN3 488 aa10.54□□□□□ -0.72
PSEN1-204ENST00000394164 NRG4Q8WWG1 115 aa10.54□□□□□ -0.72
PSEN1-204ENST00000394164 SEC14L1Q92503 715 aa10.54□□□□□ -0.72
PSEN1-204ENST00000394164 SYT11Q9BT88 431 aa10.54□□□□□ -0.72
PSEN1-204ENST00000394164 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.54□□□□□ -0.72
PSEN1-204ENST00000394164 TTC36A6NLP5 189 aa10.53□□□□□ -0.72
PSEN1-204ENST00000394164 CES2O00748 559 aa10.53□□□□□ -0.72
PSEN1-204ENST00000394164 ZNF646O15015 1829 aaPredicted RBP10.53□□□□□ -0.72
PSEN1-204ENST00000394164 CFHP08603 1231 aa10.53□□□□□ -0.72
PSEN1-204ENST00000394164 SP2Q02086 613 aa10.53□□□□□ -0.72
PSEN1-204ENST00000394164 PRKCEQ02156 737 aa10.53□□□□□ -0.72
PSEN1-204ENST00000394164 TTC27Q6P3X3 843 aa10.53□□□□□ -0.72
PSEN1-204ENST00000394164 MYLK4Q86YV6 388 aaPredicted RBP10.53□□□□□ -0.72
PSEN1-204ENST00000394164 CCDC105Q8IYK2 499 aa10.53□□□□□ -0.72
PSEN1-204ENST00000394164 C1orf54Q8WWF1 131 aa10.53□□□□□ -0.72
PSEN1-204ENST00000394164 CKAP2Q8WWK9 683 aa10.53□□□□□ -0.72
PSEN1-204ENST00000394164 ZNF333Q96JL9 665 aa10.53□□□□□ -0.72
PSEN1-204ENST00000394164 LRRC37BQ96QE4 947 aa10.53□□□□□ -0.72
PSEN1-204ENST00000394164 STMN4Q9H169 189 aaPredicted RBP10.53□□□□□ -0.72
PSEN1-204ENST00000394164 POLR3FQ9H1D9 316 aaPredicted RBP10.53□□□□□ -0.72
PSEN1-204ENST00000394164 MMADHCQ9H3L0 296 aaPredicted RBP10.53□□□□□ -0.72
PSEN1-204ENST00000394164 DOCK5Q9H7D0 1870 aa10.53□□□□□ -0.72
PSEN1-204ENST00000394164 PRKAG3Q9UGI9 489 aa10.53□□□□□ -0.72
PSEN1-204ENST00000394164 SYNPO2Q9UMS6 1093 aa10.53□□□□□ -0.72
PSEN1-204ENST00000394164 WFS1O76024 890 aa10.53□□□□□ -0.72
PSEN1-204ENST00000394164 FAM163BP0C2L3 166 aa10.53□□□□□ -0.72
PSEN1-204ENST00000394164 CYP11B1P15538 503 aa10.53□□□□□ -0.72
PSEN1-204ENST00000394164 MARK3P27448 753 aa10.53□□□□□ -0.72
PSEN1-204ENST00000394164 CCND2P30279 289 aa10.53□□□□□ -0.72
PSEN1-204ENST00000394164 SGSM1Q2NKQ1 1148 aa10.53□□□□□ -0.72
PSEN1-204ENST00000394164 ZFYVE27Q5T4F4 411 aa10.53□□□□□ -0.72
PSEN1-204ENST00000394164 FKBP1CQ5VVH2 108 aa10.53□□□□□ -0.72
PSEN1-204ENST00000394164 KRT39Q6A163 491 aa10.53□□□□□ -0.72
PSEN1-204ENST00000394164 DSTYKQ6XUX3 929 aa10.53□□□□□ -0.72
PSEN1-204ENST00000394164 CDR2LQ86X02 465 aaPredicted RBP10.53□□□□□ -0.72
PSEN1-204ENST00000394164 C4orf19Q8IY42 314 aa10.53□□□□□ -0.72
PSEN1-204ENST00000394164 ZNF280CQ8ND82 737 aa10.53□□□□□ -0.72
PSEN1-204ENST00000394164 ZNF564Q8TBZ8 553 aaPredicted RBP10.53□□□□□ -0.72
PSEN1-204ENST00000394164 ATG4AQ8WYN0 398 aa10.53□□□□□ -0.72
PSEN1-204ENST00000394164 NAP1L3Q99457 506 aaPredicted RBP10.53□□□□□ -0.72
PSEN1-204ENST00000394164 HEMGNQ9BXL5 484 aa10.53□□□□□ -0.72
PSEN1-204ENST00000394164 CDC42EP4Q9H3Q1 356 aaKnown RBP10.53□□□□□ -0.72
PSEN1-204ENST00000394164 JPH1Q9HDC5 661 aaPredicted RBP10.53□□□□□ -0.72
PSEN1-204ENST00000394164 GALNT8Q9NY28 637 aa10.53□□□□□ -0.72
PSEN1-204ENST00000394164 RASAL2Q9UJF2 1139 aa10.53□□□□□ -0.72
PSEN1-204ENST00000394164 USTQ9Y2C2 406 aa10.53□□□□□ -0.72
PSEN1-204ENST00000394164 UBE4BO95155 1302 aa10.52□□□□□ -0.72
PSEN1-204ENST00000394164 CLDN3O15551 220 aa10.52□□□□□ -0.72
PSEN1-204ENST00000394164 PLA2G6O60733 806 aa10.52□□□□□ -0.72
PSEN1-204ENST00000394164 PTPRAP18433 802 aa10.52□□□□□ -0.72
PSEN1-204ENST00000394164 LIG4P49917 911 aa10.52□□□□□ -0.72
PSEN1-204ENST00000394164 POLGP54098 1239 aaPredicted RBP10.52□□□□□ -0.72
PSEN1-204ENST00000394164 MFAP3P55082 362 aa10.52□□□□□ -0.72
PSEN1-204ENST00000394164 ACTR2P61160 394 aa10.52□□□□□ -0.72
PSEN1-204ENST00000394164 KRT76Q01546 638 aa10.52□□□□□ -0.72
PSEN1-204ENST00000394164 FMO1Q01740 532 aa10.52□□□□□ -0.72
PSEN1-204ENST00000394164 KYNUQ16719 465 aa10.52□□□□□ -0.72
PSEN1-204ENST00000394164 ZNF394Q53GI3 561 aa10.52□□□□□ -0.72
PSEN1-204ENST00000394164 ISLR2Q6UXK2 745 aa10.52□□□□□ -0.72
PSEN1-204ENST00000394164 VSIG10LQ86VR7 867 aa10.52□□□□□ -0.72
PSEN1-204ENST00000394164 SLC9A9Q8IVB4 645 aa10.52□□□□□ -0.72
PSEN1-204ENST00000394164 TRPM4Q8TD43 1214 aa10.52□□□□□ -0.72
PSEN1-204ENST00000394164 ZBED3Q96IU2 234 aaPredicted RBP10.52□□□□□ -0.72
PSEN1-204ENST00000394164 NT5C1BQ96P26 610 aa10.52□□□□□ -0.72
PSEN1-204ENST00000394164 R3HDMLQ9H3Y0 253 aa10.52□□□□□ -0.72
PSEN1-204ENST00000394164 KLHL11Q9NVR0 708 aa10.52□□□□□ -0.72
PSEN1-204ENST00000394164 RAB20Q9NX57 234 aa10.52□□□□□ -0.72
PSEN1-204ENST00000394164 CEP350Q5VT06 3117 aa10.52□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms