RNA–Protein interactions for RNA: ENST00000394106.6

CMTM4-202, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM4, Length 1,187 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-202ENST00000394106 PRR29P0C7W0 189 aa33.18■■■□□ 2.9
CMTM4-202ENST00000394106 SNRPFP62306 86 aaKnown RBP33.18■■■□□ 2.9
CMTM4-202ENST00000394106 SIGLEC14Q08ET2 396 aa33.18■■■□□ 2.9
CMTM4-202ENST00000394106 KNOP1Q1ED39 458 aaKnown RBP33.18■■■□□ 2.9
CMTM4-202ENST00000394106 SV2CQ496J9 727 aa33.18■■■□□ 2.9
CMTM4-202ENST00000394106 KRBA2Q6ZNG9 492 aa33.18■■■□□ 2.9
CMTM4-202ENST00000394106 MTMR12Q9C0I1 747 aa33.18■■■□□ 2.9
CMTM4-202ENST00000394106 DNMT3BQ9UBC3 853 aaKnown RBP33.18■■■□□ 2.9
CMTM4-202ENST00000394106 RAPGEFL1Q9UHV5 662 aa33.18■■■□□ 2.9
CMTM4-202ENST00000394106 INSL5Q9Y5Q6 135 aa33.18■■■□□ 2.9
CMTM4-202ENST00000394106 RPN1P04843 607 aaKnown RBP33.17■■■□□ 2.9
CMTM4-202ENST00000394106 KRT19P08727 400 aa33.17■■■□□ 2.9
CMTM4-202ENST00000394106 PSMD2Q13200 908 aa33.17■■■□□ 2.9
CMTM4-202ENST00000394106 HFE2Q6ZVN8 426 aa33.17■■■□□ 2.9
CMTM4-202ENST00000394106 METTL23Q86XA0 190 aa33.17■■■□□ 2.9
CMTM4-202ENST00000394106 CSGALNACT2Q8N6G5 542 aa33.17■■■□□ 2.9
CMTM4-202ENST00000394106 KIAA0895Q8NCT3 520 aa33.17■■■□□ 2.9
CMTM4-202ENST00000394106 PGLYRP2Q96PD5 576 aa33.17■■■□□ 2.9
CMTM4-202ENST00000394106 EPS15L1Q9UBC2 864 aa33.17■■■□□ 2.9
CMTM4-202ENST00000394106 ITGA11Q9UKX5 1188 aa33.17■■■□□ 2.9
CMTM4-202ENST00000394106 DSEQ9UL01 958 aa33.17■■■□□ 2.9
CMTM4-202ENST00000394106 TECTAO75443 2155 aa33.16■■■□□ 2.9
CMTM4-202ENST00000394106 KPNA7A9QM74 516 aa33.16■■■□□ 2.9
CMTM4-202ENST00000394106 ZNF202O95125 648 aa33.16■■■□□ 2.9
CMTM4-202ENST00000394106 CYP11A1P05108 521 aa33.16■■■□□ 2.9
CMTM4-202ENST00000394106 PNPLA4P41247 253 aa33.16■■■□□ 2.9
CMTM4-202ENST00000394106 SURF1Q15526 300 aa33.16■■■□□ 2.9
CMTM4-202ENST00000394106 SNRNP35Q16560 246 aaKnown RBP33.16■■■□□ 2.9
CMTM4-202ENST00000394106 PABPC1LQ4VXU2 614 aaKnown RBP33.16■■■□□ 2.9
CMTM4-202ENST00000394106 UBALD2Q8IYN6 164 aa33.16■■■□□ 2.9
CMTM4-202ENST00000394106 XXYLT1Q8NBI6 393 aa33.16■■■□□ 2.9
CMTM4-202ENST00000394106 ANKRD36BP1Q96IX9 119 aa33.16■■■□□ 2.9
CMTM4-202ENST00000394106 KCNK12Q9HB15 430 aa33.16■■■□□ 2.9
CMTM4-202ENST00000394106 PTPRJQ12913 1337 aa33.15■■■□□ 2.9
CMTM4-202ENST00000394106 BFSP1Q12934 665 aa33.15■■■□□ 2.9
CMTM4-202ENST00000394106 SCARA3Q6AZY7 606 aa33.15■■■□□ 2.9
CMTM4-202ENST00000394106 DOCK8Q8NF50 2099 aa33.15■■■□□ 2.9
CMTM4-202ENST00000394106 BORCS6Q96GS4 357 aa33.15■■■□□ 2.9
CMTM4-202ENST00000394106 TMEM209Q96SK2 561 aa33.15■■■□□ 2.9
CMTM4-202ENST00000394106 INTS13Q9NVM9 706 aa33.15■■■□□ 2.9
CMTM4-202ENST00000394106 CGNQ9P2M7 1197 aaKnown RBP33.15■■■□□ 2.9
CMTM4-202ENST00000394106 MAFFQ9ULX9 164 aa33.15■■■□□ 2.9
CMTM4-202ENST00000394106 GOLGA6L4A6NEF3 574 aa33.14■■■□□ 2.9
CMTM4-202ENST00000394106 LAMP2P13473 410 aa33.14■■■□□ 2.9
CMTM4-202ENST00000394106 MYBPC2Q14324 1141 aa33.14■■■□□ 2.9
CMTM4-202ENST00000394106 WSCD1Q658N2 575 aa33.14■■■□□ 2.9
CMTM4-202ENST00000394106 OR5B17Q8NGF7 314 aa33.14■■■□□ 2.9
CMTM4-202ENST00000394106 ITFG1Q8TB96 612 aa33.14■■■□□ 2.9
CMTM4-202ENST00000394106 CCDC47Q96A33 483 aaKnown RBP33.14■■■□□ 2.9
CMTM4-202ENST00000394106 TNNC2P02585 160 aa33.13■■■□□ 2.89
CMTM4-202ENST00000394106 RBP5P82980 135 aa33.13■■■□□ 2.89
CMTM4-202ENST00000394106 TWF1Q12792 350 aa33.13■■■□□ 2.89
CMTM4-202ENST00000394106 GPR17Q13304 367 aa33.13■■■□□ 2.89
CMTM4-202ENST00000394106 OR10T2Q8NGX3 314 aa33.13■■■□□ 2.89
CMTM4-202ENST00000394106 RSAD2Q8WXG1 361 aa33.13■■■□□ 2.89
CMTM4-202ENST00000394106 IGSF9Q9P2J2 1179 aa33.13■■■□□ 2.89
CMTM4-202ENST00000394106 SIX4Q9UIU6 781 aa33.13■■■□□ 2.89
CMTM4-202ENST00000394106 R3HCC1Q9Y3T6 440 aaKnown RBP33.13■■■□□ 2.89
CMTM4-202ENST00000394106 TRIOO75962 3097 aa33.13■■■□□ 2.89
CMTM4-202ENST00000394106 RHOP08100 348 aa33.12■■■□□ 2.89
CMTM4-202ENST00000394106 DLATP10515 647 aaKnown RBP33.12■■■□□ 2.89
CMTM4-202ENST00000394106 PTPN2P17706 415 aa33.12■■■□□ 2.89
CMTM4-202ENST00000394106 DPYDQ12882 1025 aa33.12■■■□□ 2.89
CMTM4-202ENST00000394106 TDGQ13569 410 aa33.12■■■□□ 2.89
CMTM4-202ENST00000394106 THEM5Q8N1Q8 247 aa33.12■■■□□ 2.89
CMTM4-202ENST00000394106 LRRC52Q8N7C0 313 aa33.12■■■□□ 2.89
CMTM4-202ENST00000394106 ST13P5Q8NFI4 369 aaPredicted RBP33.12■■■□□ 2.89
CMTM4-202ENST00000394106 CXorf38Q8TB03 319 aa33.12■■■□□ 2.89
CMTM4-202ENST00000394106 GOLGA5Q8TBA6 731 aa33.12■■■□□ 2.89
CMTM4-202ENST00000394106 PBXIP1Q96AQ6 731 aa33.12■■■□□ 2.89
CMTM4-202ENST00000394106 CCDC127Q96BQ5 260 aa33.12■■■□□ 2.89
CMTM4-202ENST00000394106 CORO1BQ9BR76 489 aa33.12■■■□□ 2.89
CMTM4-202ENST00000394106 CDH7Q9ULB5 785 aa33.12■■■□□ 2.89
CMTM4-202ENST00000394106 NOTCH4Q99466 2003 aa33.11■■■□□ 2.89
CMTM4-202ENST00000394106 EXOC3O60645 756 aa33.11■■■□□ 2.89
CMTM4-202ENST00000394106 VNN2O95498 520 aa33.11■■■□□ 2.89
CMTM4-202ENST00000394106 CYP24A1Q07973 514 aa33.11■■■□□ 2.89
CMTM4-202ENST00000394106 DUOXA2Q1HG44 320 aa33.11■■■□□ 2.89
CMTM4-202ENST00000394106 WDR49Q8IV35 697 aa33.11■■■□□ 2.89
CMTM4-202ENST00000394106 C12orf56Q8IXR9 622 aa33.11■■■□□ 2.89
CMTM4-202ENST00000394106 ELMOD1Q8N336 334 aa33.11■■■□□ 2.89
CMTM4-202ENST00000394106 ING5Q8WYH8 240 aa33.11■■■□□ 2.89
CMTM4-202ENST00000394106 FGF13Q92913 245 aa33.11■■■□□ 2.89
CMTM4-202ENST00000394106 ASIC4Q96FT7 647 aa33.11■■■□□ 2.89
CMTM4-202ENST00000394106 FNBP1Q96RU3 617 aa33.11■■■□□ 2.89
CMTM4-202ENST00000394106 MRPS23Q9Y3D9 190 aaKnown RBP33.11■■■□□ 2.89
CMTM4-202ENST00000394106 CDR1P51861 262 aa33.1■■■□□ 2.89
CMTM4-202ENST00000394106 DUSP4Q13115 394 aa33.1■■■□□ 2.89
CMTM4-202ENST00000394106 RTP3Q9BQQ7 232 aa33.1■■■□□ 2.89
CMTM4-202ENST00000394106 HCN4Q9Y3Q4 1203 aa33.1■■■□□ 2.89
CMTM4-202ENST00000394106 YIPF1Q9Y548 306 aa33.1■■■□□ 2.89
CMTM4-202ENST00000394106 ZFP37Q9Y6Q3 630 aaPredicted RBP33.1■■■□□ 2.89
CMTM4-202ENST00000394106 MTMR11A4FU01 709 aa33.09■■■□□ 2.89
CMTM4-202ENST00000394106 HUS1O60921 280 aa33.09■■■□□ 2.89
CMTM4-202ENST00000394106 TNNI1P19237 187 aa33.09■■■□□ 2.89
CMTM4-202ENST00000394106 PSMD6Q15008 389 aa33.09■■■□□ 2.89
CMTM4-202ENST00000394106 SLC39A12Q504Y0 691 aa33.09■■■□□ 2.89
CMTM4-202ENST00000394106 ATAD1Q8NBU5 361 aa33.09■■■□□ 2.89
CMTM4-202ENST00000394106 CCDC34Q96HJ3 373 aa33.09■■■□□ 2.89
CMTM4-202ENST00000394106 ZNF512Q96ME7 567 aaPredicted RBP33.09■■■□□ 2.89
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms