RNA–Protein interactions for RNA: ENST00000394053.6

MTHFD2-201, Transcript of methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MTHFD2, Length 4,456 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD2-201ENST00000394053 COG7P83436 770 aa11.21□□□□□ -0.61
MTHFD2-201ENST00000394053 RPS6KA2Q15349 733 aa11.21□□□□□ -0.61
MTHFD2-201ENST00000394053 TMEM161BQ8NDZ6 487 aa11.21□□□□□ -0.61
MTHFD2-201ENST00000394053 ACSF2Q96CM8 615 aaPredicted RBP11.21□□□□□ -0.61
MTHFD2-201ENST00000394053 PKNOX2Q96KN3 472 aa11.21□□□□□ -0.61
MTHFD2-201ENST00000394053 FSD1LQ9BXM9 530 aa11.21□□□□□ -0.61
MTHFD2-201ENST00000394053 SNTG2Q9NY99 539 aa11.21□□□□□ -0.61
MTHFD2-201ENST00000394053 IQANK1A0A1B0GTG1 560 aa11.21□□□□□ -0.61
MTHFD2-201ENST00000394053 GLRA2P23416 452 aa11.21□□□□□ -0.61
MTHFD2-201ENST00000394053 RASSF2P50749 326 aa11.21□□□□□ -0.61
MTHFD2-201ENST00000394053 DLG4P78352 724 aa11.21□□□□□ -0.61
MTHFD2-201ENST00000394053 VEPH1Q14D04 833 aa11.21□□□□□ -0.61
MTHFD2-201ENST00000394053 ARHGEF19Q8IW93 802 aa11.21□□□□□ -0.61
MTHFD2-201ENST00000394053 DCLK2Q8N568 766 aa11.21□□□□□ -0.61
MTHFD2-201ENST00000394053 PPM1NQ8N819 430 aa11.21□□□□□ -0.61
MTHFD2-201ENST00000394053 ASAP3Q8TDY4 903 aa11.21□□□□□ -0.61
MTHFD2-201ENST00000394053 EPAS1Q99814 870 aa11.21□□□□□ -0.61
MTHFD2-201ENST00000394053 PPME1Q9Y570 386 aa11.21□□□□□ -0.61
MTHFD2-201ENST00000394053 PLIN4Q96Q06 1357 aa11.21□□□□□ -0.61
MTHFD2-201ENST00000394053 ZBTB24O43167 697 aaPredicted RBP11.21□□□□□ -0.62
MTHFD2-201ENST00000394053 RALAP11233 206 aa11.21□□□□□ -0.62
MTHFD2-201ENST00000394053 AKAP5P24588 427 aa11.21□□□□□ -0.62
MTHFD2-201ENST00000394053 RAP1GAPP47736 663 aa11.21□□□□□ -0.62
MTHFD2-201ENST00000394053 TPI1P60174 286 aa11.21□□□□□ -0.62
MTHFD2-201ENST00000394053 GTF2BQ00403 316 aa11.21□□□□□ -0.62
MTHFD2-201ENST00000394053 DEUP1Q05D60 604 aa11.21□□□□□ -0.62
MTHFD2-201ENST00000394053 CDKL3Q8IVW4 592 aaPredicted RBP11.21□□□□□ -0.62
MTHFD2-201ENST00000394053 CCDC197Q8NCU1 140 aa11.21□□□□□ -0.62
MTHFD2-201ENST00000394053 PDCD6IPQ8WUM4 868 aaKnown RBP11.21□□□□□ -0.62
MTHFD2-201ENST00000394053 TRIM62Q9BVG3 475 aa11.21□□□□□ -0.62
MTHFD2-201ENST00000394053 PFDN4Q9NQP4 134 aa11.21□□□□□ -0.62
MTHFD2-201ENST00000394053 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.21□□□□□ -0.62
MTHFD2-201ENST00000394053 BFARQ9NZS9 450 aa11.21□□□□□ -0.62
MTHFD2-201ENST00000394053 STK38LQ9Y2H1 464 aa11.21□□□□□ -0.62
MTHFD2-201ENST00000394053 SIK3Q9Y2K2 1263 aa11.21□□□□□ -0.62
MTHFD2-201ENST00000394053 KDM3BQ7LBC6 1761 aa11.21□□□□□ -0.62
MTHFD2-201ENST00000394053 KCNN4O15554 427 aa11.21□□□□□ -0.62
MTHFD2-201ENST00000394053 APRTP07741 180 aa11.21□□□□□ -0.62
MTHFD2-201ENST00000394053 FAM200BP0CF97 657 aa11.21□□□□□ -0.62
MTHFD2-201ENST00000394053 RBP3P10745 1247 aa11.21□□□□□ -0.62
MTHFD2-201ENST00000394053 BYSLQ13895 437 aaKnown RBP11.21□□□□□ -0.62
MTHFD2-201ENST00000394053 SMAD1Q15797 465 aaKnown RBP11.21□□□□□ -0.62
MTHFD2-201ENST00000394053 JAMLQ86YT9 394 aa11.21□□□□□ -0.62
MTHFD2-201ENST00000394053 COL20A1Q9P218 1284 aa11.21□□□□□ -0.62
MTHFD2-201ENST00000394053 LRRIQ3A6PVS8 624 aaPredicted RBP11.2□□□□□ -0.62
MTHFD2-201ENST00000394053 VDRP11473 427 aa11.2□□□□□ -0.62
MTHFD2-201ENST00000394053 ACO1P21399 889 aaKnown RBP11.2□□□□□ -0.62
MTHFD2-201ENST00000394053 GPD1P21695 349 aa11.2□□□□□ -0.62
MTHFD2-201ENST00000394053 PMLP29590 882 aa11.2□□□□□ -0.62
MTHFD2-201ENST00000394053 ACADSBP45954 432 aa11.2□□□□□ -0.62
MTHFD2-201ENST00000394053 MTM1Q13496 603 aa11.2□□□□□ -0.62
MTHFD2-201ENST00000394053 MFSD10Q14728 455 aa11.2□□□□□ -0.62
MTHFD2-201ENST00000394053 HSDL1Q3SXM5 330 aa11.2□□□□□ -0.62
MTHFD2-201ENST00000394053 NUGGCQ68CJ6 796 aa11.2□□□□□ -0.62
MTHFD2-201ENST00000394053 SPATA18Q8TC71 538 aa11.2□□□□□ -0.62
MTHFD2-201ENST00000394053 ZNF606Q8WXB4 792 aa11.2□□□□□ -0.62
MTHFD2-201ENST00000394053 SOCS4Q8WXH5 440 aa11.2□□□□□ -0.62
MTHFD2-201ENST00000394053 KAT5Q92993 513 aa11.2□□□□□ -0.62
MTHFD2-201ENST00000394053 TTC25Q96NG3 672 aa11.2□□□□□ -0.62
MTHFD2-201ENST00000394053 TMEM106CQ9BVX2 250 aa11.2□□□□□ -0.62
MTHFD2-201ENST00000394053 MLXIPLQ9NP71 852 aa11.2□□□□□ -0.62
MTHFD2-201ENST00000394053 MORC2Q9Y6X9 1032 aaPredicted RBP11.2□□□□□ -0.62
MTHFD2-201ENST00000394053 ASTN1O14525 1302 aa11.2□□□□□ -0.62
MTHFD2-201ENST00000394053 EPHB6O15197 1021 aa11.2□□□□□ -0.62
MTHFD2-201ENST00000394053 CCNE2O96020 404 aa11.2□□□□□ -0.62
MTHFD2-201ENST00000394053 THP07101 528 aa11.2□□□□□ -0.62
MTHFD2-201ENST00000394053 MCF2P10911 925 aa11.2□□□□□ -0.62
MTHFD2-201ENST00000394053 INHBEP58166 350 aa11.2□□□□□ -0.62
MTHFD2-201ENST00000394053 PSMD6Q15008 389 aa11.2□□□□□ -0.62
MTHFD2-201ENST00000394053 FSCN1Q16658 493 aaKnown RBP11.2□□□□□ -0.62
MTHFD2-201ENST00000394053 MIIPQ5JXC2 388 aa11.2□□□□□ -0.62
MTHFD2-201ENST00000394053 HYIQ5T013 277 aa11.2□□□□□ -0.62
MTHFD2-201ENST00000394053 BRSK2Q8IWQ3 736 aa11.2□□□□□ -0.62
MTHFD2-201ENST00000394053 C9orf72Q96LT7 481 aa11.2□□□□□ -0.62
MTHFD2-201ENST00000394053 ZSWIM1Q9BR11 485 aa11.2□□□□□ -0.62
MTHFD2-201ENST00000394053 IKZF4Q9H2S9 585 aa11.2□□□□□ -0.62
MTHFD2-201ENST00000394053 TCHHQ07283 1943 aa11.2□□□□□ -0.62
MTHFD2-201ENST00000394053 NFASCO94856 1347 aa11.2□□□□□ -0.62
MTHFD2-201ENST00000394053 PTPN11Q06124 597 aaPredicted RBP11.2□□□□□ -0.62
MTHFD2-201ENST00000394053 P3H1Q32P28 736 aa11.2□□□□□ -0.62
MTHFD2-201ENST00000394053 EFHC1Q5JVL4 640 aa11.2□□□□□ -0.62
MTHFD2-201ENST00000394053 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.2□□□□□ -0.62
MTHFD2-201ENST00000394053 GPR142Q7Z601 462 aa11.2□□□□□ -0.62
MTHFD2-201ENST00000394053 ARHGAP24Q8N264 748 aa11.2□□□□□ -0.62
MTHFD2-201ENST00000394053 ARRDC4Q8NCT1 418 aa11.2□□□□□ -0.62
MTHFD2-201ENST00000394053 SLC7A14Q8TBB6 771 aa11.2□□□□□ -0.62
MTHFD2-201ENST00000394053 NUDCD1Q96RS6 583 aa11.2□□□□□ -0.62
MTHFD2-201ENST00000394053 PLEKHA5Q9HAU0 1116 aa11.2□□□□□ -0.62
MTHFD2-201ENST00000394053 XPNPEP3Q9NQH7 507 aa11.2□□□□□ -0.62
MTHFD2-201ENST00000394053 RAB6BQ9NRW1 208 aa11.2□□□□□ -0.62
MTHFD2-201ENST00000394053 KIAA1257Q9ULG3 409 aa11.2□□□□□ -0.62
MTHFD2-201ENST00000394053 NID2Q14112 1375 aa11.2□□□□□ -0.62
MTHFD2-201ENST00000394053 DDX3XO00571 662 aaKnown RBP eCLIP11.19□□□□□ -0.622e-18■■■■□ 20.5
MTHFD2-201ENST00000394053 CYB561D2O14569 222 aa11.19□□□□□ -0.62
MTHFD2-201ENST00000394053 ATN1P54259 1190 aaPredicted RBP11.19□□□□□ -0.62
MTHFD2-201ENST00000394053 CDH8P55286 799 aa11.19□□□□□ -0.62
MTHFD2-201ENST00000394053 HIF1AQ16665 826 aa11.19□□□□□ -0.62
MTHFD2-201ENST00000394053 MGAT5BQ3V5L5 792 aa11.19□□□□□ -0.62
MTHFD2-201ENST00000394053 KCNT1Q5JUK3 1230 aa11.19□□□□□ -0.62
MTHFD2-201ENST00000394053 TAF2Q6P1X5 1199 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms