RNA–Protein interactions for RNA: ENST00000393408.7

CBX1-202, Transcript of chromobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX1, Length 2,422 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-202ENST00000393408 ATG4CQ96DT6 458 aa19.95■□□□□ 0.78
CBX1-202ENST00000393408 CFAP57Q96MR6 1250 aa19.95■□□□□ 0.78
CBX1-202ENST00000393408 SLITRK1Q96PX8 696 aa19.95■□□□□ 0.78
CBX1-202ENST00000393408 FHDC1Q9C0D6 1143 aaPredicted RBP19.95■□□□□ 0.78
CBX1-202ENST00000393408 SAYSD1Q9NPB0 183 aa19.95■□□□□ 0.78
CBX1-202ENST00000393408 IP6K2Q9UHH9 426 aa19.95■□□□□ 0.78
CBX1-202ENST00000393408 DNPEPQ9ULA0 475 aa19.95■□□□□ 0.78
CBX1-202ENST00000393408 MYH9P35579 1960 aaKnown RBP19.95■□□□□ 0.78
CBX1-202ENST00000393408 PI4K2BG5E9Z4 385 aa19.95■□□□□ 0.78
CBX1-202ENST00000393408 KRT10P13645 584 aa19.95■□□□□ 0.78
CBX1-202ENST00000393408 CETN2P41208 172 aa19.95■□□□□ 0.78
CBX1-202ENST00000393408 IL9RQ01113 521 aa19.95■□□□□ 0.78
CBX1-202ENST00000393408 SP4Q02446 784 aa19.95■□□□□ 0.78
CBX1-202ENST00000393408 PPP1R2P3Q6NXS1 205 aa19.95■□□□□ 0.78
CBX1-202ENST00000393408 DRICH1Q6PGQ1 229 aaPredicted RBP19.95■□□□□ 0.78
CBX1-202ENST00000393408 TRABD2AQ86V40 505 aa19.95■□□□□ 0.78
CBX1-202ENST00000393408 RCOR2Q8IZ40 523 aa19.95■□□□□ 0.78
CBX1-202ENST00000393408 ANKLE1Q8NAG6 615 aa19.95■□□□□ 0.78
CBX1-202ENST00000393408 CCHCR1Q8TD31 782 aa19.95■□□□□ 0.78
CBX1-202ENST00000393408 TEPSINQ96N21 525 aa19.95■□□□□ 0.78
CBX1-202ENST00000393408 RBAKQ9NYW8 714 aaPredicted RBP19.95■□□□□ 0.78
CBX1-202ENST00000393408 KLHL14Q9P2G3 628 aa19.95■□□□□ 0.78
CBX1-202ENST00000393408 COL11A1P12107 1806 aaPredicted RBP19.95■□□□□ 0.78
CBX1-202ENST00000393408 EXOC1LA0A1B0GW35 172 aa19.94■□□□□ 0.78
CBX1-202ENST00000393408 KRT16P08779 473 aa19.94■□□□□ 0.78
CBX1-202ENST00000393408 TCF4P15884 667 aa19.94■□□□□ 0.78
CBX1-202ENST00000393408 ACTR2P61160 394 aa19.94■□□□□ 0.78
CBX1-202ENST00000393408 NR1H3Q13133 447 aa19.94■□□□□ 0.78
CBX1-202ENST00000393408 MTERF2Q49AM1 385 aa19.94■□□□□ 0.78
CBX1-202ENST00000393408 ABHD15Q6UXT9 468 aa19.94■□□□□ 0.78
CBX1-202ENST00000393408 N4BP2L2Q92802 583 aaPredicted RBP19.94■□□□□ 0.78
CBX1-202ENST00000393408 RBM41Q96IZ5 413 aaKnown RBP19.94■□□□□ 0.78
CBX1-202ENST00000393408 EBF2Q9HAK2 575 aa19.94■□□□□ 0.78
CBX1-202ENST00000393408 SLC9A2Q9UBY0 812 aa19.94■□□□□ 0.78
CBX1-202ENST00000393408 NUB1Q9Y5A7 615 aa19.94■□□□□ 0.78
CBX1-202ENST00000393408 TBXAS1P24557 533 aaPredicted RBP19.94■□□□□ 0.78
CBX1-202ENST00000393408 RPL7AP62424 266 aaKnown RBP19.94■□□□□ 0.78
CBX1-202ENST00000393408 EMC2Q15006 297 aa19.94■□□□□ 0.78
CBX1-202ENST00000393408 CCDC142Q17RM4 750 aa19.94■□□□□ 0.78
CBX1-202ENST00000393408 EAPPQ56P03 285 aaPredicted RBP19.94■□□□□ 0.78
CBX1-202ENST00000393408 ZBTB41Q5SVQ8 909 aa19.94■□□□□ 0.78
CBX1-202ENST00000393408 ECHDC2Q86YB7 292 aa19.94■□□□□ 0.78
CBX1-202ENST00000393408 TDRPQ86YL5 185 aa19.94■□□□□ 0.78
CBX1-202ENST00000393408 KIF2BQ8N4N8 673 aa19.94■□□□□ 0.78
CBX1-202ENST00000393408 AGAP11Q8TF27 550 aa19.94■□□□□ 0.78
CBX1-202ENST00000393408 KCNN1Q92952 543 aa19.94■□□□□ 0.78
CBX1-202ENST00000393408 ZBTB45Q96K62 511 aaPredicted RBP19.94■□□□□ 0.78
CBX1-202ENST00000393408 TTC25Q96NG3 672 aa19.94■□□□□ 0.78
CBX1-202ENST00000393408 ZNRF3Q9ULT6 936 aa19.94■□□□□ 0.78
CBX1-202ENST00000393408 ASMTLO95671 621 aa19.93■□□□□ 0.78
CBX1-202ENST00000393408 PIGRP01833 764 aa19.93■□□□□ 0.78
CBX1-202ENST00000393408 ZSCAN5DPP0CG00 497 aa19.93■□□□□ 0.78
CBX1-202ENST00000393408 MMP8P22894 467 aa19.93■□□□□ 0.78
CBX1-202ENST00000393408 NOP14P78316 857 aaKnown RBP19.93■□□□□ 0.78
CBX1-202ENST00000393408 CCDC15Q0P6D6 951 aa19.93■□□□□ 0.78
CBX1-202ENST00000393408 ACCSLQ4AC99 568 aa19.93■□□□□ 0.78
CBX1-202ENST00000393408 KAZNQ674X7 775 aa19.93■□□□□ 0.78
CBX1-202ENST00000393408 MFSD7Q6UXD7 560 aa19.93■□□□□ 0.78
CBX1-202ENST00000393408 ALLCQ8N6M5 410 aa19.93■□□□□ 0.78
CBX1-202ENST00000393408 TTLL6Q8N841 843 aa19.93■□□□□ 0.78
CBX1-202ENST00000393408 STAMBPL1Q96FJ0 436 aa19.93■□□□□ 0.78
CBX1-202ENST00000393408 CGRRF1Q99675 332 aa19.93■□□□□ 0.78
CBX1-202ENST00000393408 PITPNM3Q9BZ71 974 aa19.93■□□□□ 0.78
CBX1-202ENST00000393408 UBN1Q9NPG3 1134 aa19.93■□□□□ 0.78
CBX1-202ENST00000393408 KCNG1Q9UIX4 513 aa19.93■□□□□ 0.78
CBX1-202ENST00000393408 DYNC1LI1Q9Y6G9 523 aaKnown RBP19.93■□□□□ 0.78
CBX1-202ENST00000393408 TMEM191CA6NGB0 347 aa19.93■□□□□ 0.78
CBX1-202ENST00000393408 MAGEB2O15479 319 aa19.93■□□□□ 0.78
CBX1-202ENST00000393408 TMEM191BP0C7N4 346 aa19.93■□□□□ 0.78
CBX1-202ENST00000393408 CCNB1P14635 433 aa19.93■□□□□ 0.78
CBX1-202ENST00000393408 ZNF252P-AS1Q0IIN9 211 aa19.93■□□□□ 0.78
CBX1-202ENST00000393408 XKR3Q5GH77 459 aa19.93■□□□□ 0.78
CBX1-202ENST00000393408 NSUN6Q8TEA1 469 aaKnown RBP19.93■□□□□ 0.78
CBX1-202ENST00000393408 DENND1AQ8TEH3 1009 aa19.93■□□□□ 0.78
CBX1-202ENST00000393408 L3MBTL3Q96JM7 780 aaPredicted RBP19.93■□□□□ 0.78
CBX1-202ENST00000393408 GINM1Q9NU53 330 aa19.93■□□□□ 0.78
CBX1-202ENST00000393408 ZNF148Q9UQR1 794 aa19.93■□□□□ 0.78
CBX1-202ENST00000393408 A0A1B0GUA9 196 aa19.92■□□□□ 0.78
CBX1-202ENST00000393408 TJP3O95049 919 aa19.92■□□□□ 0.78
CBX1-202ENST00000393408 KRT1P04264 644 aa19.92■□□□□ 0.78
CBX1-202ENST00000393408 PECAM1P16284 738 aaPredicted RBP19.92■□□□□ 0.78
CBX1-202ENST00000393408 SKIV2L2P42285 1042 aaKnown RBP19.92■□□□□ 0.78
CBX1-202ENST00000393408 ARSEP51690 589 aa19.92■□□□□ 0.78
CBX1-202ENST00000393408 ZNF132P52740 706 aa19.92■□□□□ 0.78
CBX1-202ENST00000393408 SLFN12LQ6IEE8 588 aa19.92■□□□□ 0.78
CBX1-202ENST00000393408 OR5B17Q8NGF7 314 aa19.92■□□□□ 0.78
CBX1-202ENST00000393408 ASAP3Q8TDY4 903 aa19.92■□□□□ 0.78
CBX1-202ENST00000393408 TRIM33Q9UPN9 1127 aa19.92■□□□□ 0.78
CBX1-202ENST00000393408 PRPF4O43172 522 aaKnown RBP eCLIP19.92■□□□□ 0.782e-6■□□□□ 9.3
CBX1-202ENST00000393408 SPAG7O75391 227 aa19.92■□□□□ 0.78
CBX1-202ENST00000393408 ETS1P14921 441 aa19.92■□□□□ 0.78
CBX1-202ENST00000393408 ATF7P17544 494 aaPredicted RBP19.92■□□□□ 0.78
CBX1-202ENST00000393408 POLGP54098 1239 aaPredicted RBP19.92■□□□□ 0.78
CBX1-202ENST00000393408 MCL1Q07820 350 aa19.92■□□□□ 0.78
CBX1-202ENST00000393408 FASTKD3Q14CZ7 662 aaKnown RBP19.92■□□□□ 0.78
CBX1-202ENST00000393408 FAM47EQ6ZV65 393 aa19.92■□□□□ 0.78
CBX1-202ENST00000393408 ZNF606Q8WXB4 792 aa19.92■□□□□ 0.78
CBX1-202ENST00000393408 TMEM143Q96AN5 459 aa19.92■□□□□ 0.78
CBX1-202ENST00000393408 MYOZ2Q9NPC6 264 aa19.92■□□□□ 0.78
CBX1-202ENST00000393408 L3MBTL1Q9Y468 752 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms