RNA–Protein interactions for RNA: ENST00000393287.9

ATXN3-203, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 6,770 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-203ENST00000393287 A0A087WZ62 844 aa8.54□□□□□ -1.04
ATXN3-203ENST00000393287 HMGB1P1B2RPK0 211 aaPredicted RBP8.54□□□□□ -1.04
ATXN3-203ENST00000393287 PPP1R3GB7ZBB8 358 aa8.54□□□□□ -1.04
ATXN3-203ENST00000393287 CYP26A1O43174 497 aa8.54□□□□□ -1.04
ATXN3-203ENST00000393287 PQBP1O60828 265 aaKnown RBP8.54□□□□□ -1.04
ATXN3-203ENST00000393287 BASP1P80723 227 aaKnown RBP8.54□□□□□ -1.04
ATXN3-203ENST00000393287 EVX2Q03828 476 aa8.54□□□□□ -1.04
ATXN3-203ENST00000393287 GTF2H3Q13889 308 aa8.54□□□□□ -1.04
ATXN3-203ENST00000393287 KRT71Q3SY84 523 aa8.54□□□□□ -1.04
ATXN3-203ENST00000393287 BRSK2Q8IWQ3 736 aa8.54□□□□□ -1.04
ATXN3-203ENST00000393287 DEPDC1BQ8WUY9 529 aa8.54□□□□□ -1.04
ATXN3-203ENST00000393287 FDXACB1Q9BRP7 624 aaPredicted RBP8.54□□□□□ -1.04
ATXN3-203ENST00000393287 KIFC3Q9BVG8 833 aa8.54□□□□□ -1.04
ATXN3-203ENST00000393287 CELF4Q9BZC1 486 aaKnown RBP8.54□□□□□ -1.04
ATXN3-203ENST00000393287 MAGED2Q9UNF1 606 aaPredicted RBP8.54□□□□□ -1.04
ATXN3-203ENST00000393287 ARHGAP42A6NI28 874 aa8.54□□□□□ -1.04
ATXN3-203ENST00000393287 FAM86B1E9PN63 330 aa8.54□□□□□ -1.04
ATXN3-203ENST00000393287 EEF2KO00418 725 aaKnown RBP8.54□□□□□ -1.04
ATXN3-203ENST00000393287 STK25O00506 426 aa8.54□□□□□ -1.04
ATXN3-203ENST00000393287 LUC7L3O95232 432 aaKnown RBP8.54□□□□□ -1.04
ATXN3-203ENST00000393287 VTNP04004 478 aa8.54□□□□□ -1.04
ATXN3-203ENST00000393287 FAM86B2P0C5J1 330 aa8.54□□□□□ -1.04
ATXN3-203ENST00000393287 PMLP29590 882 aa8.54□□□□□ -1.04
ATXN3-203ENST00000393287 BCAR1P56945 870 aa8.54□□□□□ -1.04
ATXN3-203ENST00000393287 PDE1BQ01064 536 aa8.54□□□□□ -1.04
ATXN3-203ENST00000393287 COBLL1Q53SF7 1204 aa8.54□□□□□ -1.04
ATXN3-203ENST00000393287 TAF1BQ53T94 588 aaPredicted RBP8.54□□□□□ -1.04
ATXN3-203ENST00000393287 DNAJB3Q8WWF6 145 aa8.54□□□□□ -1.04
ATXN3-203ENST00000393287 CNOT10Q9H9A5 744 aaKnown RBP8.54□□□□□ -1.04
ATXN3-203ENST00000393287 MEIS2O14770 477 aa8.54□□□□□ -1.04
ATXN3-203ENST00000393287 PSTPIP1O43586 416 aa8.54□□□□□ -1.04
ATXN3-203ENST00000393287 CENPCQ03188 943 aa8.54□□□□□ -1.04
ATXN3-203ENST00000393287 BST2Q10589 180 aaKnown RBP8.54□□□□□ -1.04
ATXN3-203ENST00000393287 IRF5Q13568 498 aa8.54□□□□□ -1.04
ATXN3-203ENST00000393287 PDK1Q15118 436 aa8.54□□□□□ -1.04
ATXN3-203ENST00000393287 FBXO47Q5MNV8 452 aa8.54□□□□□ -1.04
ATXN3-203ENST00000393287 TIGD7Q6NT04 549 aaPredicted RBP8.54□□□□□ -1.04
ATXN3-203ENST00000393287 PDZD8Q8NEN9 1154 aa8.54□□□□□ -1.04
ATXN3-203ENST00000393287 MAML3Q96JK9 1138 aa8.54□□□□□ -1.04
ATXN3-203ENST00000393287 ZNF558Q96NG5 402 aa8.54□□□□□ -1.04
ATXN3-203ENST00000393287 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.54□□□□□ -1.04
ATXN3-203ENST00000393287 TLR8Q9NR97 1041 aaKnown RBP8.54□□□□□ -1.04
ATXN3-203ENST00000393287 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.54□□□□□ -1.04
ATXN3-203ENST00000393287 INHAP05111 366 aa8.54□□□□□ -1.04
ATXN3-203ENST00000393287 DEUP1Q05D60 604 aa8.54□□□□□ -1.04
ATXN3-203ENST00000393287 STK4Q13043 487 aa8.54□□□□□ -1.04
ATXN3-203ENST00000393287 NME3Q13232 169 aa8.54□□□□□ -1.04
ATXN3-203ENST00000393287 UNC93AQ86WB7 457 aa8.54□□□□□ -1.04
ATXN3-203ENST00000393287 TBC1D19Q8N5T2 526 aa8.54□□□□□ -1.04
ATXN3-203ENST00000393287 SPTLC3Q9NUV7 552 aa8.54□□□□□ -1.04
ATXN3-203ENST00000393287 PALMO75781 387 aa8.53□□□□□ -1.04
ATXN3-203ENST00000393287 RASSF2P50749 326 aa8.53□□□□□ -1.04
ATXN3-203ENST00000393287 BTG3Q14201 252 aaPredicted RBP8.53□□□□□ -1.04
ATXN3-203ENST00000393287 NR1I3Q14994 352 aa8.53□□□□□ -1.04
ATXN3-203ENST00000393287 PDK2Q15119 407 aa8.53□□□□□ -1.04
ATXN3-203ENST00000393287 ZC2HC1CQ53FD0 456 aaPredicted RBP8.53□□□□□ -1.04
ATXN3-203ENST00000393287 ATPAF2Q8N5M1 289 aa8.53□□□□□ -1.04
ATXN3-203ENST00000393287 PPHLN1Q8NEY8 458 aaKnown RBP8.53□□□□□ -1.04
ATXN3-203ENST00000393287 TSEN34Q9BSV6 310 aaKnown RBP8.53□□□□□ -1.04
ATXN3-203ENST00000393287 PPP1R12CQ9BZL4 782 aa8.53□□□□□ -1.04
ATXN3-203ENST00000393287 ELOVL4Q9GZR5 314 aa8.53□□□□□ -1.04
ATXN3-203ENST00000393287 VPS18Q9P253 973 aa8.53□□□□□ -1.04
ATXN3-203ENST00000393287 IRS2Q9Y4H2 1338 aa8.53□□□□□ -1.04
ATXN3-203ENST00000393287 A0A087WWV3 80 aa8.53□□□□□ -1.04
ATXN3-203ENST00000393287 ITGBL1O95965 494 aaPredicted RBP8.53□□□□□ -1.04
ATXN3-203ENST00000393287 PGK1P00558 417 aa8.53□□□□□ -1.04
ATXN3-203ENST00000393287 ERBB2P04626 1255 aa8.53□□□□□ -1.04
ATXN3-203ENST00000393287 MMP3P08254 477 aa8.53□□□□□ -1.04
ATXN3-203ENST00000393287 STX2P32856 288 aa8.53□□□□□ -1.04
ATXN3-203ENST00000393287 TOB1P50616 345 aaPredicted RBP8.53□□□□□ -1.04
ATXN3-203ENST00000393287 POU5F1Q01860 360 aaKnown RBP8.53□□□□□ -1.04
ATXN3-203ENST00000393287 MAP3K21Q5TCX8 1036 aa8.53□□□□□ -1.04
ATXN3-203ENST00000393287 ALS2CLQ60I27 953 aa8.53□□□□□ -1.04
ATXN3-203ENST00000393287 TTC23LQ6PF05 361 aa8.53□□□□□ -1.04
ATXN3-203ENST00000393287 ENGASEQ8NFI3 743 aa8.53□□□□□ -1.04
ATXN3-203ENST00000393287 SENP6Q9GZR1 1112 aaPredicted RBP8.53□□□□□ -1.04
ATXN3-203ENST00000393287 SLC25A13Q9UJS0 675 aa8.53□□□□□ -1.04
ATXN3-203ENST00000393287 CREB3O43889 395 aa8.53□□□□□ -1.04
ATXN3-203ENST00000393287 KIZQ2M2Z5 673 aa8.53□□□□□ -1.04
ATXN3-203ENST00000393287 BOLA3Q53S33 107 aa8.53□□□□□ -1.04
ATXN3-203ENST00000393287 HYIQ5T013 277 aa8.53□□□□□ -1.04
ATXN3-203ENST00000393287 SMYD5Q6GMV2 418 aa8.53□□□□□ -1.04
ATXN3-203ENST00000393287 CXCL17Q6UXB2 119 aa8.53□□□□□ -1.04
ATXN3-203ENST00000393287 PASD1Q8IV76 773 aa8.53□□□□□ -1.04
ATXN3-203ENST00000393287 ACRBPQ8NEB7 543 aa8.53□□□□□ -1.04
ATXN3-203ENST00000393287 KIF3CO14782 793 aa8.53□□□□□ -1.04
ATXN3-203ENST00000393287 LAG3P18627 525 aa8.53□□□□□ -1.04
ATXN3-203ENST00000393287 DYNLT1P63172 113 aa8.53□□□□□ -1.04
ATXN3-203ENST00000393287 IL9RQ01113 521 aa8.53□□□□□ -1.04
ATXN3-203ENST00000393287 PPP6R3Q5H9R7 873 aaPredicted RBP8.53□□□□□ -1.04
ATXN3-203ENST00000393287 PSMB7Q99436 277 aa8.53□□□□□ -1.04
ATXN3-203ENST00000393287 BRD8Q9H0E9 1235 aa8.53□□□□□ -1.04
ATXN3-203ENST00000393287 EBAG9O00559 213 aa8.53□□□□□ -1.04
ATXN3-203ENST00000393287 SLC12A3P55017 1021 aa8.53□□□□□ -1.04
ATXN3-203ENST00000393287 ADCY2Q08462 1091 aa8.53□□□□□ -1.04
ATXN3-203ENST00000393287 PTK7Q13308 1070 aa8.53□□□□□ -1.04
ATXN3-203ENST00000393287 KRT33BQ14525 404 aa8.53□□□□□ -1.04
ATXN3-203ENST00000393287 SHROOM1Q2M3G4 852 aaPredicted RBP8.53□□□□□ -1.04
ATXN3-203ENST00000393287 NT5DC1Q5TFE4 455 aa8.53□□□□□ -1.04
ATXN3-203ENST00000393287 ACAD10Q6JQN1 1059 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms