RNA–Protein interactions for RNA: ENST00000392770.6

SCN3B-202, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 6,061 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-202ENST00000392770 MEIS2O14770 477 aa17.43■□□□□ 0.38
SCN3B-202ENST00000392770 TBC1D12O60347 775 aa17.43■□□□□ 0.38
SCN3B-202ENST00000392770 ZNF189O75820 626 aaPredicted RBP17.43■□□□□ 0.38
SCN3B-202ENST00000392770 OR1G1P47890 313 aa17.43■□□□□ 0.38
SCN3B-202ENST00000392770 CNTN2Q02246 1040 aa17.43■□□□□ 0.38
SCN3B-202ENST00000392770 PPATQ06203 517 aa17.43■□□□□ 0.38
SCN3B-202ENST00000392770 LRIG3Q6UXM1 1119 aa17.43■□□□□ 0.38
SCN3B-202ENST00000392770 A0A087WZ62 844 aa17.43■□□□□ 0.38
SCN3B-202ENST00000392770 DCTN3O75935 186 aa17.43■□□□□ 0.38
SCN3B-202ENST00000392770 FDXACB1Q9BRP7 624 aaPredicted RBP17.43■□□□□ 0.38
SCN3B-202ENST00000392770 VIPAS39Q9H9C1 493 aa17.43■□□□□ 0.38
SCN3B-202ENST00000392770 ATP9BO43861 1147 aa17.43■□□□□ 0.38
SCN3B-202ENST00000392770 TGFB3P10600 412 aa17.43■□□□□ 0.38
SCN3B-202ENST00000392770 MYBPC2Q14324 1141 aa17.43■□□□□ 0.38
SCN3B-202ENST00000392770 NLRP14Q86W24 1093 aa17.43■□□□□ 0.38
SCN3B-202ENST00000392770 CD302Q8IX05 232 aa17.43■□□□□ 0.38
SCN3B-202ENST00000392770 SEPT5Q99719 369 aaPredicted RBP17.43■□□□□ 0.38
SCN3B-202ENST00000392770 SLC13A1Q9BZW2 595 aa17.43■□□□□ 0.38
SCN3B-202ENST00000392770 PCSK1P29120 753 aa17.42■□□□□ 0.38
SCN3B-202ENST00000392770 DRP2Q13474 957 aa17.42■□□□□ 0.38
SCN3B-202ENST00000392770 DCAF6Q58WW2 860 aa17.42■□□□□ 0.38
SCN3B-202ENST00000392770 ATP8B4Q8TF62 1192 aa17.42■□□□□ 0.38
SCN3B-202ENST00000392770 SCG3Q8WXD2 468 aaKnown RBP17.42■□□□□ 0.38
SCN3B-202ENST00000392770 CLMNQ96JQ2 1002 aa17.42■□□□□ 0.38
SCN3B-202ENST00000392770 NEU2Q9Y3R4 380 aa17.42■□□□□ 0.38
SCN3B-202ENST00000392770 C2CD6Q53TS8 623 aa17.42■□□□□ 0.38
SCN3B-202ENST00000392770 RBM15Q96T37 977 aaKnown RBP eCLIP17.42■□□□□ 0.38
SCN3B-202ENST00000392770 HMBSP08397 361 aa17.42■□□□□ 0.38
SCN3B-202ENST00000392770 CYP2C8P10632 490 aa17.42■□□□□ 0.38
SCN3B-202ENST00000392770 CATSPERGQ6ZRH7 1159 aa17.42■□□□□ 0.38
SCN3B-202ENST00000392770 KDELC2Q7Z4H8 507 aa17.42■□□□□ 0.38
SCN3B-202ENST00000392770 HAS1Q92839 578 aa17.42■□□□□ 0.38
SCN3B-202ENST00000392770 RSAD1Q9HA92 442 aa17.42■□□□□ 0.38
SCN3B-202ENST00000392770 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.42■□□□□ 0.38
SCN3B-202ENST00000392770 PCDHB7Q9Y5E2 793 aa17.42■□□□□ 0.38
SCN3B-202ENST00000392770 KPNA7A9QM74 516 aa17.42■□□□□ 0.38
SCN3B-202ENST00000392770 NKRFO15226 690 aaKnown RBP eCLIP17.42■□□□□ 0.38
SCN3B-202ENST00000392770 ESRRAP11474 423 aaPredicted RBP17.42■□□□□ 0.38
SCN3B-202ENST00000392770 COILP38432 576 aaPredicted RBP17.42■□□□□ 0.38
SCN3B-202ENST00000392770 RECQLP46063 649 aaPredicted RBP17.42■□□□□ 0.38
SCN3B-202ENST00000392770 LONRF1Q17RB8 773 aa17.42■□□□□ 0.38
SCN3B-202ENST00000392770 USP50Q70EL3 339 aaPredicted RBP17.42■□□□□ 0.38
SCN3B-202ENST00000392770 TRMT10CQ7L0Y3 403 aaKnown RBP17.42■□□□□ 0.38
SCN3B-202ENST00000392770 TRPC7Q9HCX4 862 aa17.42■□□□□ 0.38
SCN3B-202ENST00000392770 EFHC1Q5JVL4 640 aa17.42■□□□□ 0.38
SCN3B-202ENST00000392770 A1CFQ9NQ94 594 aaKnown RBP17.42■□□□□ 0.38
SCN3B-202ENST00000392770 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.42■□□□□ 0.38
SCN3B-202ENST00000392770 FAM237AA0A1B0GTK4 181 aa17.41■□□□□ 0.38
SCN3B-202ENST00000392770 PSTPIP1O43586 416 aa17.41■□□□□ 0.38
SCN3B-202ENST00000392770 ZNF235Q14590 738 aa17.41■□□□□ 0.38
SCN3B-202ENST00000392770 FRA10AC1Q70Z53 315 aa17.41■□□□□ 0.38
SCN3B-202ENST00000392770 CEP120Q8N960 986 aa17.41■□□□□ 0.38
SCN3B-202ENST00000392770 CYP3A7-CYP3A51PA0A087WV96 503 aa17.41■□□□□ 0.38
SCN3B-202ENST00000392770 GTPBP10A4D1E9 387 aaKnown RBP17.41■□□□□ 0.38
SCN3B-202ENST00000392770 CYP3A7P24462 503 aa17.41■□□□□ 0.38
SCN3B-202ENST00000392770 SESN2P58004 480 aaPredicted RBP17.41■□□□□ 0.38
SCN3B-202ENST00000392770 TADA2BQ86TJ2 420 aa17.41■□□□□ 0.38
SCN3B-202ENST00000392770 TTC8Q8TAM2 541 aa17.41■□□□□ 0.38
SCN3B-202ENST00000392770 ISCUQ9H1K1 167 aa17.41■□□□□ 0.38
SCN3B-202ENST00000392770 RAB6BQ9NRW1 208 aa17.41■□□□□ 0.38
SCN3B-202ENST00000392770 GPRC5DQ9NZD1 345 aa17.41■□□□□ 0.38
SCN3B-202ENST00000392770 GPR182O15218 404 aa17.41■□□□□ 0.38
SCN3B-202ENST00000392770 ADORA2AP29274 412 aa17.41■□□□□ 0.38
SCN3B-202ENST00000392770 CARSP49589 748 aaKnown RBP17.41■□□□□ 0.38
SCN3B-202ENST00000392770 YWHAHQ04917 246 aaPredicted RBP17.41■□□□□ 0.38
SCN3B-202ENST00000392770 DGKZQ13574 1117 aa17.41■□□□□ 0.38
SCN3B-202ENST00000392770 DDX42Q86XP3 938 aaKnown RBP eCLIP17.41■□□□□ 0.38
SCN3B-202ENST00000392770 DCP1BQ8IZD4 617 aaKnown RBP17.41■□□□□ 0.38
SCN3B-202ENST00000392770 PDCD7Q8N8D1 485 aaKnown RBP17.41■□□□□ 0.38
SCN3B-202ENST00000392770 USP33Q8TEY7 942 aa17.41■□□□□ 0.38
SCN3B-202ENST00000392770 PPME1Q9Y570 386 aa17.41■□□□□ 0.38
SCN3B-202ENST00000392770 PIK3CDO00329 1044 aa17.41■□□□□ 0.38
SCN3B-202ENST00000392770 DPYSL4O14531 572 aa17.41■□□□□ 0.38
SCN3B-202ENST00000392770 CST8O60676 142 aa17.41■□□□□ 0.38
SCN3B-202ENST00000392770 APRTP07741 180 aa17.41■□□□□ 0.38
SCN3B-202ENST00000392770 ODC1P11926 461 aa17.41■□□□□ 0.38
SCN3B-202ENST00000392770 HSPA9P38646 679 aaKnown RBP17.41■□□□□ 0.38
SCN3B-202ENST00000392770 MYL6P60660 151 aa17.41■□□□□ 0.38
SCN3B-202ENST00000392770 GRIK4Q16099 956 aa17.41■□□□□ 0.38
SCN3B-202ENST00000392770 ARHGEF19Q8IW93 802 aa17.41■□□□□ 0.38
SCN3B-202ENST00000392770 ATPAF2Q8N5M1 289 aa17.41■□□□□ 0.38
SCN3B-202ENST00000392770 OR2W6PQ8NHA6 318 aa17.41■□□□□ 0.38
SCN3B-202ENST00000392770 PARD3BQ8TEW8 1205 aa17.41■□□□□ 0.38
SCN3B-202ENST00000392770 AGAP3Q96P47 875 aa17.41■□□□□ 0.38
SCN3B-202ENST00000392770 FAM200BP0CF97 657 aa17.4■□□□□ 0.38
SCN3B-202ENST00000392770 INSRRP14616 1297 aa17.4■□□□□ 0.38
SCN3B-202ENST00000392770 NFKBIAP25963 317 aa17.4■□□□□ 0.38
SCN3B-202ENST00000392770 KCNJ1P48048 391 aa17.4■□□□□ 0.38
SCN3B-202ENST00000392770 ITGA8P53708 1063 aa17.4■□□□□ 0.38
SCN3B-202ENST00000392770 GUCY1A3Q02108 690 aa17.4■□□□□ 0.38
SCN3B-202ENST00000392770 SPATA18Q8TC71 538 aa17.4■□□□□ 0.38
SCN3B-202ENST00000392770 WDR18Q9BV38 432 aa17.4■□□□□ 0.38
SCN3B-202ENST00000392770 SETD4Q9NVD3 440 aa17.4■□□□□ 0.38
SCN3B-202ENST00000392770 KCPQ6ZWJ8 1503 aa17.4■□□□□ 0.38
SCN3B-202ENST00000392770 CASQ2O14958 399 aaPredicted RBP17.4■□□□□ 0.38
SCN3B-202ENST00000392770 WDR75Q8IWA0 830 aaKnown RBP17.4■□□□□ 0.38
SCN3B-202ENST00000392770 ROBO1Q9Y6N7 1651 aa17.4■□□□□ 0.38
SCN3B-202ENST00000392770 CSDE1O75534 798 aaKnown RBP17.4■□□□□ 0.38
SCN3B-202ENST00000392770 PSMD10O75832 226 aa17.4■□□□□ 0.38
SCN3B-202ENST00000392770 CHEK2O96017 543 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms