RNA–Protein interactions for RNA: ENST00000392557.8

BRF1-204, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 3,579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-204ENST00000392557 RNASELQ05823 741 aaKnown RBP11.49□□□□□ -0.57
BRF1-204ENST00000392557 EMC2Q15006 297 aa11.49□□□□□ -0.57
BRF1-204ENST00000392557 LY6KQ17RY6 165 aa11.49□□□□□ -0.57
BRF1-204ENST00000392557 TRIM50Q86XT4 487 aa11.49□□□□□ -0.57
BRF1-204ENST00000392557 DEPTORQ8TB45 409 aa11.49□□□□□ -0.57
BRF1-204ENST00000392557 CCHCR1Q8TD31 782 aa11.49□□□□□ -0.57
BRF1-204ENST00000392557 GRK7Q8WTQ7 553 aa11.49□□□□□ -0.57
BRF1-204ENST00000392557 C11orf70Q9BRQ4 267 aa11.49□□□□□ -0.57
BRF1-204ENST00000392557 STRA6Q9BX79 667 aa11.49□□□□□ -0.57
BRF1-204ENST00000392557 ROPN1BQ9BZX4 212 aaPredicted RBP11.49□□□□□ -0.57
BRF1-204ENST00000392557 YIPF3Q9GZM5 350 aa11.49□□□□□ -0.57
BRF1-204ENST00000392557 ROPN1Q9HAT0 212 aaPredicted RBP11.49□□□□□ -0.57
BRF1-204ENST00000392557 XPNPEP1Q9NQW7 623 aa11.49□□□□□ -0.57
BRF1-204ENST00000392557 HAO1Q9UJM8 370 aa11.49□□□□□ -0.57
BRF1-204ENST00000392557 MAFGO15525 162 aa11.48□□□□□ -0.57
BRF1-204ENST00000392557 DKC1O60832 514 aaKnown RBP eCLIP11.48□□□□□ -0.572e-6■■■■■ 56.4
BRF1-204ENST00000392557 SUPT20HL2P0C7V6 817 aa11.48□□□□□ -0.57
BRF1-204ENST00000392557 MYBL1P10243 752 aa11.48□□□□□ -0.57
BRF1-204ENST00000392557 ITIH2P19823 946 aa11.48□□□□□ -0.57
BRF1-204ENST00000392557 GHRHRQ02643 423 aa11.48□□□□□ -0.57
BRF1-204ENST00000392557 CRYMQ14894 314 aa11.48□□□□□ -0.57
BRF1-204ENST00000392557 SPDYCQ5MJ68 293 aa11.48□□□□□ -0.57
BRF1-204ENST00000392557 C9orf131Q5VYM1 1079 aa11.48□□□□□ -0.57
BRF1-204ENST00000392557 CYP4X1Q8N118 509 aa11.48□□□□□ -0.57
BRF1-204ENST00000392557 LRRC8CQ8TDW0 803 aa11.48□□□□□ -0.57
BRF1-204ENST00000392557 TAS1R2Q8TE23 839 aa11.48□□□□□ -0.57
BRF1-204ENST00000392557 SERPINB12Q96P63 405 aa11.48□□□□□ -0.57
BRF1-204ENST00000392557 SPATC1LQ9H0A9 340 aa11.48□□□□□ -0.57
BRF1-204ENST00000392557 DCTN4Q9UJW0 460 aa11.48□□□□□ -0.57
BRF1-204ENST00000392557 ENO4A6NNW6 628 aa11.48□□□□□ -0.57
BRF1-204ENST00000392557 PEX5P50542 639 aa11.48□□□□□ -0.57
BRF1-204ENST00000392557 ERFP50548 548 aa11.48□□□□□ -0.57
BRF1-204ENST00000392557 NCKAP1LP55160 1127 aa11.48□□□□□ -0.57
BRF1-204ENST00000392557 ZBTB16Q05516 673 aa11.48□□□□□ -0.57
BRF1-204ENST00000392557 XRRA1Q6P2D8 792 aa11.48□□□□□ -0.57
BRF1-204ENST00000392557 SLC9A9Q8IVB4 645 aa11.48□□□□□ -0.57
BRF1-204ENST00000392557 MCPH1Q8NEM0 835 aa11.48□□□□□ -0.57
BRF1-204ENST00000392557 SLC7A3Q8WY07 619 aa11.48□□□□□ -0.57
BRF1-204ENST00000392557 ZBTB45Q96K62 511 aaPredicted RBP11.48□□□□□ -0.57
BRF1-204ENST00000392557 LRRC37BQ96QE4 947 aa11.48□□□□□ -0.57
BRF1-204ENST00000392557 FNBP1Q96RU3 617 aa11.48□□□□□ -0.57
BRF1-204ENST00000392557 RBM15Q96T37 977 aaKnown RBP eCLIP11.48□□□□□ -0.576e-6■■■■□ 19.9
BRF1-204ENST00000392557 ALG13Q9NP73 1137 aaKnown RBP11.48□□□□□ -0.57
BRF1-204ENST00000392557 CLEC11AQ9Y240 323 aa11.48□□□□□ -0.57
BRF1-204ENST00000392557 PCDHA3Q9Y5H8 950 aa11.48□□□□□ -0.57
BRF1-204ENST00000392557 SSC5DA1L4H1 1573 aa11.48□□□□□ -0.57
BRF1-204ENST00000392557 KIAA1217Q5T5P2 1943 aa11.48□□□□□ -0.57
BRF1-204ENST00000392557 RRM1P23921 792 aa11.48□□□□□ -0.57
BRF1-204ENST00000392557 P3H1Q32P28 736 aa11.48□□□□□ -0.57
BRF1-204ENST00000392557 SPOCK2Q92563 424 aa11.48□□□□□ -0.57
BRF1-204ENST00000392557 SEMA4DQ92854 862 aa11.48□□□□□ -0.57
BRF1-204ENST00000392557 NENFQ9UMX5 172 aa11.48□□□□□ -0.57
BRF1-204ENST00000392557 DOCK1Q14185 1865 aa11.47□□□□□ -0.57
BRF1-204ENST00000392557 SPATA31C2B4DYI2 1134 aa11.47□□□□□ -0.57
BRF1-204ENST00000392557 NOP56O00567 594 aaKnown RBP11.47□□□□□ -0.57
BRF1-204ENST00000392557 CDH16O75309 829 aa11.47□□□□□ -0.57
BRF1-204ENST00000392557 POTEJP0CG39 1038 aa11.47□□□□□ -0.57
BRF1-204ENST00000392557 SRGAP2CP0DJJ0 459 aa11.47□□□□□ -0.57
BRF1-204ENST00000392557 UBA1P22314 1058 aaKnown RBP11.47□□□□□ -0.57
BRF1-204ENST00000392557 RFX1P22670 979 aa11.47□□□□□ -0.57
BRF1-204ENST00000392557 CCND1P24385 295 aa11.47□□□□□ -0.57
BRF1-204ENST00000392557 NFIL3Q16649 462 aa11.47□□□□□ -0.57
BRF1-204ENST00000392557 XKR3Q5GH77 459 aa11.47□□□□□ -0.57
BRF1-204ENST00000392557 NAIF1Q69YI7 327 aaPredicted RBP11.47□□□□□ -0.57
BRF1-204ENST00000392557 KRT39Q6A163 491 aa11.47□□□□□ -0.57
BRF1-204ENST00000392557 ABHD15Q6UXT9 468 aa11.47□□□□□ -0.57
BRF1-204ENST00000392557 SAMD3Q8N6K7 520 aa11.47□□□□□ -0.57
BRF1-204ENST00000392557 RAB3IPQ96QF0 476 aaPredicted RBP11.47□□□□□ -0.57
BRF1-204ENST00000392557 PPP1R16BQ96T49 567 aa11.47□□□□□ -0.57
BRF1-204ENST00000392557 TRAIPQ9BWF2 469 aa11.47□□□□□ -0.57
BRF1-204ENST00000392557 ASCC2Q9H1I8 757 aaPredicted RBP11.47□□□□□ -0.57
BRF1-204ENST00000392557 SLCO1B3Q9NPD5 702 aa11.47□□□□□ -0.57
BRF1-204ENST00000392557 C1orf112Q9NSG2 853 aa11.47□□□□□ -0.57
BRF1-204ENST00000392557 NINJ2Q9NZG7 142 aa11.47□□□□□ -0.57
BRF1-204ENST00000392557 GTF3C4Q9UKN8 822 aa11.47□□□□□ -0.57
BRF1-204ENST00000392557 ADAMTS5Q9UNA0 930 aa11.47□□□□□ -0.57
BRF1-204ENST00000392557 R3HDM2Q9Y2K5 976 aaKnown RBP11.47□□□□□ -0.57
BRF1-204ENST00000392557 PHIPQ8WWQ0 1821 aa11.47□□□□□ -0.57
BRF1-204ENST00000392557 FMO1Q01740 532 aa11.47□□□□□ -0.57
BRF1-204ENST00000392557 MPP2Q14168 576 aa11.47□□□□□ -0.57
BRF1-204ENST00000392557 C1orf220Q5T0J3 134 aa11.47□□□□□ -0.57
BRF1-204ENST00000392557 CAPRIN2Q6IMN6 1127 aaKnown RBP11.47□□□□□ -0.57
BRF1-204ENST00000392557 LBX2Q6XYB7 198 aa11.47□□□□□ -0.57
BRF1-204ENST00000392557 PPP1R21Q6ZMI0 780 aa11.47□□□□□ -0.57
BRF1-204ENST00000392557 ZBTB33Q86T24 672 aa11.47□□□□□ -0.57
BRF1-204ENST00000392557 MAP4K3Q8IVH8 894 aa11.47□□□□□ -0.57
BRF1-204ENST00000392557 ATL2Q8NHH9 583 aa11.47□□□□□ -0.57
BRF1-204ENST00000392557 KREMEN1Q96MU8 473 aa11.47□□□□□ -0.57
BRF1-204ENST00000392557 SMC6Q96SB8 1091 aa11.47□□□□□ -0.57
BRF1-204ENST00000392557 PPP1R12CQ9BZL4 782 aa11.47□□□□□ -0.57
BRF1-204ENST00000392557 KIF9Q9HAQ2 790 aa11.47□□□□□ -0.57
BRF1-204ENST00000392557 PDE4DIPQ5VU43 2346 aa11.47□□□□□ -0.57
BRF1-204ENST00000392557 GOLGA8RI6L899 631 aa11.47□□□□□ -0.57
BRF1-204ENST00000392557 K7ERI5 159 aa11.47□□□□□ -0.57
BRF1-204ENST00000392557 GJB6O95452 261 aa11.47□□□□□ -0.57
BRF1-204ENST00000392557 MAPTP10636 758 aaKnown RBP11.47□□□□□ -0.57
BRF1-204ENST00000392557 RAD23BP54727 409 aa11.47□□□□□ -0.57
BRF1-204ENST00000392557 DYNLT1P63172 113 aa11.47□□□□□ -0.57
BRF1-204ENST00000392557 WDR44Q5JSH3 913 aa11.47□□□□□ -0.57
BRF1-204ENST00000392557 SLC39A4Q6P5W5 647 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms