RNA–Protein interactions for RNA: ENST00000392456.3

CCDC50-202, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CCDC50, Length 2,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-202ENST00000392456 RNF168Q8IYW5 571 aaPredicted RBP20.18■□□□□ 0.82
CCDC50-202ENST00000392456 GPD1LQ8N335 351 aa20.18■□□□□ 0.82
CCDC50-202ENST00000392456 LMO3Q8TAP4 145 aa20.18■□□□□ 0.82
CCDC50-202ENST00000392456 CORO1BQ9BR76 489 aa20.18■□□□□ 0.82
CCDC50-202ENST00000392456 TFR2Q9UP52 801 aa20.18■□□□□ 0.82
CCDC50-202ENST00000392456 REXO2Q9Y3B8 237 aaKnown RBP20.18■□□□□ 0.82
CCDC50-202ENST00000392456 A0A087WZ62 844 aa20.17■□□□□ 0.82
CCDC50-202ENST00000392456 GSTA1P08263 222 aa20.17■□□□□ 0.82
CCDC50-202ENST00000392456 HNRNPH3P31942 346 aaKnown RBP20.17■□□□□ 0.82
CCDC50-202ENST00000392456 VEGFBP49765 207 aa20.17■□□□□ 0.82
CCDC50-202ENST00000392456 TSR1Q2NL82 804 aaKnown RBP20.17■□□□□ 0.82
CCDC50-202ENST00000392456 MFSD14AQ96MC6 490 aa20.17■□□□□ 0.82
CCDC50-202ENST00000392456 NDNQ99608 321 aa20.17■□□□□ 0.82
CCDC50-202ENST00000392456 FDXACB1Q9BRP7 624 aaPredicted RBP20.17■□□□□ 0.82
CCDC50-202ENST00000392456 TMEM117Q9H0C3 514 aa20.17■□□□□ 0.82
CCDC50-202ENST00000392456 NHEJ1Q9H9Q4 299 aaPredicted RBP20.17■□□□□ 0.82
CCDC50-202ENST00000392456 PLCB1Q9NQ66 1216 aa20.17■□□□□ 0.82
CCDC50-202ENST00000392456 AGO2Q9UKV8 859 aaKnown RBP20.17■□□□□ 0.82
CCDC50-202ENST00000392456 AKT3Q9Y243 479 aa20.17■□□□□ 0.82
CCDC50-202ENST00000392456 CFAP73A6NFT4 308 aa20.17■□□□□ 0.82
CCDC50-202ENST00000392456 INO80B-WBP1J3KQ70 363 aa20.17■□□□□ 0.82
CCDC50-202ENST00000392456 KRT14P02533 472 aa20.17■□□□□ 0.82
CCDC50-202ENST00000392456 CYBAP13498 195 aa20.17■□□□□ 0.82
CCDC50-202ENST00000392456 YY1P25490 414 aa20.17■□□□□ 0.82
CCDC50-202ENST00000392456 ARID5AQ03989 594 aa20.17■□□□□ 0.82
CCDC50-202ENST00000392456 CKAP4Q07065 602 aaKnown RBP20.17■□□□□ 0.82
CCDC50-202ENST00000392456 CYP24A1Q07973 514 aa20.17■□□□□ 0.82
CCDC50-202ENST00000392456 IRF5Q13568 498 aa20.17■□□□□ 0.82
CCDC50-202ENST00000392456 LMBRD2Q68DH5 695 aaPredicted RBP20.17■□□□□ 0.82
CCDC50-202ENST00000392456 ZBTB33Q86T24 672 aa20.17■□□□□ 0.82
CCDC50-202ENST00000392456 TMEM110Q86TL2 294 aa20.17■□□□□ 0.82
CCDC50-202ENST00000392456 EXOC8Q8IYI6 725 aa20.17■□□□□ 0.82
CCDC50-202ENST00000392456 RUBCNQ92622 972 aa20.17■□□□□ 0.82
CCDC50-202ENST00000392456 INO80BQ9C086 356 aaPredicted RBP20.17■□□□□ 0.82
CCDC50-202ENST00000392456 EPN1Q9Y6I3 576 aaPredicted RBP20.17■□□□□ 0.82
CCDC50-202ENST00000392456 A0A0B4J269 797 aa20.16■□□□□ 0.82
CCDC50-202ENST00000392456 GTPBP10A4D1E9 387 aaKnown RBP20.16■□□□□ 0.82
CCDC50-202ENST00000392456 PRKCBP05771 671 aa20.16■□□□□ 0.82
CCDC50-202ENST00000392456 DLATP10515 647 aaKnown RBP20.16■□□□□ 0.82
CCDC50-202ENST00000392456 PTENP60484 403 aa20.16■□□□□ 0.82
CCDC50-202ENST00000392456 ZNF200P98182 395 aaPredicted RBP20.16■□□□□ 0.82
CCDC50-202ENST00000392456 KBTBD12Q3ZCT8 623 aa20.16■□□□□ 0.82
CCDC50-202ENST00000392456 ERICH1Q86X53 443 aa20.16■□□□□ 0.82
CCDC50-202ENST00000392456 KIAA0319LQ8IZA0 1049 aa20.16■□□□□ 0.82
CCDC50-202ENST00000392456 GBP7Q8N8V2 638 aaPredicted RBP20.16■□□□□ 0.82
CCDC50-202ENST00000392456 DHRS1Q96LJ7 313 aa20.16■□□□□ 0.82
CCDC50-202ENST00000392456 BRD8Q9H0E9 1235 aa20.16■□□□□ 0.82
CCDC50-202ENST00000392456 KAT6AQ92794 2004 aa20.16■□□□□ 0.82
CCDC50-202ENST00000392456 MAPK13O15264 365 aa20.16■□□□□ 0.82
CCDC50-202ENST00000392456 MAGEB2O15479 319 aa20.16■□□□□ 0.82
CCDC50-202ENST00000392456 NDUFA10O95299 355 aa20.16■□□□□ 0.82
CCDC50-202ENST00000392456 MYL3P08590 195 aa20.16■□□□□ 0.82
CCDC50-202ENST00000392456 SMIM10L2AP0DMW4 78 aa20.16■□□□□ 0.82
CCDC50-202ENST00000392456 SMIM10L2BP0DMW5 78 aa20.16■□□□□ 0.82
CCDC50-202ENST00000392456 EFNA5P52803 228 aa20.16■□□□□ 0.82
CCDC50-202ENST00000392456 MYL7Q01449 175 aa20.16■□□□□ 0.82
CCDC50-202ENST00000392456 MBTD1Q05BQ5 628 aa20.16■□□□□ 0.82
CCDC50-202ENST00000392456 HGSNATQ68CP4 663 aa20.16■□□□□ 0.82
CCDC50-202ENST00000392456 ACO2Q99798 780 aaKnown RBP20.16■□□□□ 0.82
CCDC50-202ENST00000392456 SLC12A4Q9UP95 1085 aa20.16■□□□□ 0.82
CCDC50-202ENST00000392456 TRAPPC3O43617 180 aa20.15■□□□□ 0.82
CCDC50-202ENST00000392456 PGK1P00558 417 aa20.15■□□□□ 0.82
CCDC50-202ENST00000392456 TNFSF9P41273 254 aa20.15■□□□□ 0.82
CCDC50-202ENST00000392456 MATR3P43243 847 aaKnown RBP eCLIP20.15■□□□□ 0.82
CCDC50-202ENST00000392456 CACNB2Q08289 660 aaPredicted RBP20.15■□□□□ 0.82
CCDC50-202ENST00000392456 MAPK6Q16659 721 aa20.15■□□□□ 0.82
CCDC50-202ENST00000392456 IQCEQ6IPM2 695 aa20.15■□□□□ 0.82
CCDC50-202ENST00000392456 C1orf131Q8NDD1 294 aaKnown RBP20.15■□□□□ 0.82
CCDC50-202ENST00000392456 CAVIN3Q969G5 261 aa20.15■□□□□ 0.82
CCDC50-202ENST00000392456 IQCDQ96DY2 449 aa20.15■□□□□ 0.82
CCDC50-202ENST00000392456 IFT43Q96FT9 208 aa20.15■□□□□ 0.82
CCDC50-202ENST00000392456 RMDN2Q96LZ7 410 aa20.15■□□□□ 0.82
CCDC50-202ENST00000392456 INTS2Q9H0H0 1204 aaKnown RBP20.15■□□□□ 0.82
CCDC50-202ENST00000392456 AP5M1Q9H0R1 490 aa20.15■□□□□ 0.82
CCDC50-202ENST00000392456 FZD8Q9H461 694 aa20.15■□□□□ 0.82
CCDC50-202ENST00000392456 DMAP1Q9NPF5 467 aaPredicted RBP20.15■□□□□ 0.82
CCDC50-202ENST00000392456 SIP14410 1827 aa20.15■□□□□ 0.82
CCDC50-202ENST00000392456 ZNF263O14978 683 aa20.15■□□□□ 0.82
CCDC50-202ENST00000392456 EXTL3O43909 919 aa20.15■□□□□ 0.82
CCDC50-202ENST00000392456 AKR1A1P14550 325 aa20.15■□□□□ 0.82
CCDC50-202ENST00000392456 EPHB4P54760 987 aa20.15■□□□□ 0.82
CCDC50-202ENST00000392456 MCCD1P59942 119 aaPredicted RBP20.15■□□□□ 0.82
CCDC50-202ENST00000392456 RAPGEF1Q13905 1077 aa20.15■□□□□ 0.82
CCDC50-202ENST00000392456 FSCN1Q16658 493 aaKnown RBP20.15■□□□□ 0.82
CCDC50-202ENST00000392456 SCARA3Q6AZY7 606 aa20.15■□□□□ 0.82
CCDC50-202ENST00000392456 PHLDB3Q6NSJ2 640 aa20.15■□□□□ 0.82
CCDC50-202ENST00000392456 EMBQ6PCB8 327 aa20.15■□□□□ 0.82
CCDC50-202ENST00000392456 ZBTB8OSQ8IWT0 167 aa20.15■□□□□ 0.82
CCDC50-202ENST00000392456 CD99L2Q8TCZ2 262 aa20.15■□□□□ 0.82
CCDC50-202ENST00000392456 ZNF516Q92618 1163 aa20.15■□□□□ 0.82
CCDC50-202ENST00000392456 TRAPPC9Q96Q05 1148 aa20.15■□□□□ 0.82
CCDC50-202ENST00000392456 MSTO1Q9BUK6 570 aa20.15■□□□□ 0.82
CCDC50-202ENST00000392456 EDEM3Q9BZQ6 932 aa20.15■□□□□ 0.82
CCDC50-202ENST00000392456 ZNHIT6Q9NWK9 470 aaKnown RBP20.15■□□□□ 0.82
CCDC50-202ENST00000392456 PTPRJQ12913 1337 aa20.15■□□□□ 0.82
CCDC50-202ENST00000392456 ZNF233A6NK53 670 aa20.14■□□□□ 0.82
CCDC50-202ENST00000392456 C6orf222P0C671 652 aaPredicted RBP20.14■□□□□ 0.82
CCDC50-202ENST00000392456 CYP27A1Q02318 531 aa20.14■□□□□ 0.82
CCDC50-202ENST00000392456 MFSD10Q14728 455 aa20.14■□□□□ 0.82
CCDC50-202ENST00000392456 HDAC7Q8WUI4 952 aa20.14■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms