RNA–Protein interactions for RNA: ENST00000392449.4

PTPRK-208, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2

Gene PTPRK, Length 1,456 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-208ENST00000392449 EFCAB13Q8IY85 973 aa17.97■□□□□ 0.47
PTPRK-208ENST00000392449 SHKBP1Q8TBC3 707 aa17.97■□□□□ 0.47
PTPRK-208ENST00000392449 POMGNT1Q8WZA1 660 aa17.97■□□□□ 0.47
PTPRK-208ENST00000392449 ELSPBP1Q96BH3 223 aa17.97■□□□□ 0.47
PTPRK-208ENST00000392449 SHDQ96IW2 340 aa17.97■□□□□ 0.47
PTPRK-208ENST00000392449 ASB16Q96NS5 453 aa17.97■□□□□ 0.47
PTPRK-208ENST00000392449 ST6GALNAC4Q9H4F1 302 aa17.97■□□□□ 0.47
PTPRK-208ENST00000392449 MRPL44Q9H9J2 332 aaKnown RBP17.97■□□□□ 0.47
PTPRK-208ENST00000392449 ASAH2Q9NR71 780 aa17.97■□□□□ 0.47
PTPRK-208ENST00000392449 CCDC39Q9UFE4 941 aa17.97■□□□□ 0.47
PTPRK-208ENST00000392449 STYXL1Q9Y6J8 313 aa17.97■□□□□ 0.47
PTPRK-208ENST00000392449 FRYLO94915 3013 aa17.97■□□□□ 0.47
PTPRK-208ENST00000392449 FAM186AA6NE01 2351 aa17.97■□□□□ 0.47
PTPRK-208ENST00000392449 COL4A2P08572 1712 aa17.97■□□□□ 0.47
PTPRK-208ENST00000392449 TICRRQ7Z2Z1 1910 aa17.97■□□□□ 0.47
PTPRK-208ENST00000392449 ANO9A1A5B4 782 aa17.96■□□□□ 0.47
PTPRK-208ENST00000392449 MTMR11A4FU01 709 aa17.96■□□□□ 0.47
PTPRK-208ENST00000392449 SHISA7A6NL88 538 aa17.96■□□□□ 0.47
PTPRK-208ENST00000392449 FAM170BA6NMN3 283 aa17.96■□□□□ 0.47
PTPRK-208ENST00000392449 PIRO00625 290 aa17.96■□□□□ 0.47
PTPRK-208ENST00000392449 ZNF197O14709 1029 aa17.96■□□□□ 0.47
PTPRK-208ENST00000392449 ODC1P11926 461 aa17.96■□□□□ 0.47
PTPRK-208ENST00000392449 TYMPP19971 482 aa17.96■□□□□ 0.47
PTPRK-208ENST00000392449 PFKPQ01813 784 aa17.96■□□□□ 0.47
PTPRK-208ENST00000392449 STXBP5Q5T5C0 1151 aa17.96■□□□□ 0.47
PTPRK-208ENST00000392449 SCARA3Q6AZY7 606 aa17.96■□□□□ 0.47
PTPRK-208ENST00000392449 C1orf210Q8IVY1 113 aa17.96■□□□□ 0.47
PTPRK-208ENST00000392449 MAML2Q8IZL2 1156 aaPredicted RBP17.96■□□□□ 0.47
PTPRK-208ENST00000392449 SAAL1Q96ER3 474 aa17.96■□□□□ 0.47
PTPRK-208ENST00000392449 STRA6Q9BX79 667 aa17.96■□□□□ 0.47
PTPRK-208ENST00000392449 BACH2Q9BYV9 841 aa17.96■□□□□ 0.47
PTPRK-208ENST00000392449 A0A1W2PRU2 124 aa17.95■□□□□ 0.46
PTPRK-208ENST00000392449 OR6C75A6NL08 312 aa17.95■□□□□ 0.46
PTPRK-208ENST00000392449 SP9P0CG40 484 aa17.95■□□□□ 0.46
PTPRK-208ENST00000392449 IDEP14735 1019 aa17.95■□□□□ 0.46
PTPRK-208ENST00000392449 TARSP26639 723 aaKnown RBP17.95■□□□□ 0.46
PTPRK-208ENST00000392449 EPHA5P54756 1037 aa17.95■□□□□ 0.46
PTPRK-208ENST00000392449 PRKCQQ04759 706 aa17.95■□□□□ 0.46
PTPRK-208ENST00000392449 GPR17Q13304 367 aa17.95■□□□□ 0.46
PTPRK-208ENST00000392449 CENPPQ6IPU0 288 aa17.95■□□□□ 0.46
PTPRK-208ENST00000392449 VITQ6UXI7 678 aa17.95■□□□□ 0.46
PTPRK-208ENST00000392449 SV2BQ7L1I2 683 aa17.95■□□□□ 0.46
PTPRK-208ENST00000392449 TMC8Q8IU68 726 aa17.95■□□□□ 0.46
PTPRK-208ENST00000392449 CD302Q8IX05 232 aa17.95■□□□□ 0.46
PTPRK-208ENST00000392449 ADSSL1Q8N142 457 aa17.95■□□□□ 0.46
PTPRK-208ENST00000392449 PDILTQ8N807 584 aa17.95■□□□□ 0.46
PTPRK-208ENST00000392449 ZSCAN18Q8TBC5 510 aaPredicted RBP17.95■□□□□ 0.46
PTPRK-208ENST00000392449 LRRC3Q9BY71 257 aa17.95■□□□□ 0.46
PTPRK-208ENST00000392449 ZFP14Q9HCL3 533 aa17.95■□□□□ 0.46
PTPRK-208ENST00000392449 ZNF334Q9HCZ1 680 aaPredicted RBP17.95■□□□□ 0.46
PTPRK-208ENST00000392449 LTB4R2Q9NPC1 389 aa17.95■□□□□ 0.46
PTPRK-208ENST00000392449 GCNT3O95395 438 aa17.95■□□□□ 0.46
PTPRK-208ENST00000392449 TXLNAP40222 546 aa17.95■□□□□ 0.46
PTPRK-208ENST00000392449 STAT6P42226 847 aa17.95■□□□□ 0.46
PTPRK-208ENST00000392449 SLFN12LQ6IEE8 588 aa17.95■□□□□ 0.46
PTPRK-208ENST00000392449 SMARCD2Q92925 531 aa17.95■□□□□ 0.46
PTPRK-208ENST00000392449 RSPRY1Q96DX4 576 aa17.95■□□□□ 0.46
PTPRK-208ENST00000392449 PYM1Q9BRP8 204 aaKnown RBP17.95■□□□□ 0.46
PTPRK-208ENST00000392449 FAM213AQ9BRX8 229 aa17.95■□□□□ 0.46
PTPRK-208ENST00000392449 SLITRK6Q9H5Y7 841 aa17.95■□□□□ 0.46
PTPRK-208ENST00000392449 DPP3Q9NY33 737 aa17.95■□□□□ 0.46
PTPRK-208ENST00000392449 MAFFQ9ULX9 164 aa17.95■□□□□ 0.46
PTPRK-208ENST00000392449 DERAQ9Y315 318 aa17.95■□□□□ 0.46
PTPRK-208ENST00000392449 K7ELQ4 463 aaPredicted RBP17.94■□□□□ 0.46
PTPRK-208ENST00000392449 STX6O43752 255 aa17.94■□□□□ 0.46
PTPRK-208ENST00000392449 MICAL2O94851 1124 aa17.94■□□□□ 0.46
PTPRK-208ENST00000392449 SLC39A14Q15043 492 aa17.94■□□□□ 0.46
PTPRK-208ENST00000392449 SLC39A12Q504Y0 691 aa17.94■□□□□ 0.46
PTPRK-208ENST00000392449 L1TD1Q5T7N2 865 aaKnown RBP17.94■□□□□ 0.46
PTPRK-208ENST00000392449 FOXD4L5Q5VV16 416 aaPredicted RBP17.94■□□□□ 0.46
PTPRK-208ENST00000392449 FOXD4L4Q8WXT5 416 aaPredicted RBP17.94■□□□□ 0.46
PTPRK-208ENST00000392449 HVCN1Q96D96 273 aa17.94■□□□□ 0.46
PTPRK-208ENST00000392449 INTS4Q96HW7 963 aaKnown RBP17.94■□□□□ 0.46
PTPRK-208ENST00000392449 TSPAN18Q96SJ8 248 aa17.94■□□□□ 0.46
PTPRK-208ENST00000392449 LPIN3Q9BQK8 851 aa17.94■□□□□ 0.46
PTPRK-208ENST00000392449 ASB7Q9H672 318 aa17.94■□□□□ 0.46
PTPRK-208ENST00000392449 BRD9Q9H8M2 597 aa17.94■□□□□ 0.46
PTPRK-208ENST00000392449 SPATA6Q9NWH7 488 aaPredicted RBP17.94■□□□□ 0.46
PTPRK-208ENST00000392449 C2CD2Q9Y426 696 aa17.94■□□□□ 0.46
PTPRK-208ENST00000392449 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.94■□□□□ 0.46
PTPRK-208ENST00000392449 FANCMQ8IYD8 2048 aa17.93■□□□□ 0.46
PTPRK-208ENST00000392449 DCHS1Q96JQ0 3298 aa17.93■□□□□ 0.46
PTPRK-208ENST00000392449 GVINP1Q7Z2Y8 2422 aa17.93■□□□□ 0.46
PTPRK-208ENST00000392449 SPTBN4Q9H254 2564 aa17.93■□□□□ 0.46
PTPRK-208ENST00000392449 GOLGA8IPA6NC78 632 aa17.93■□□□□ 0.46
PTPRK-208ENST00000392449 GOLGA8JA6NMD2 632 aa17.93■□□□□ 0.46
PTPRK-208ENST00000392449 CYB561D2O14569 222 aa17.93■□□□□ 0.46
PTPRK-208ENST00000392449 GDI1P31150 447 aa17.93■□□□□ 0.46
PTPRK-208ENST00000392449 ABCD1P33897 745 aa17.93■□□□□ 0.46
PTPRK-208ENST00000392449 EPHB3P54753 998 aa17.93■□□□□ 0.46
PTPRK-208ENST00000392449 MYBPC2Q14324 1141 aa17.93■□□□□ 0.46
PTPRK-208ENST00000392449 WSCD1Q658N2 575 aa17.93■□□□□ 0.46
PTPRK-208ENST00000392449 ARMCX5Q6P1M9 558 aa17.93■□□□□ 0.46
PTPRK-208ENST00000392449 GLIS3Q8NEA6 775 aa17.93■□□□□ 0.46
PTPRK-208ENST00000392449 KCNG4Q8TDN1 519 aa17.93■□□□□ 0.46
PTPRK-208ENST00000392449 HPS3Q969F9 1004 aa17.93■□□□□ 0.46
PTPRK-208ENST00000392449 SEPT5Q99719 369 aaPredicted RBP17.93■□□□□ 0.46
PTPRK-208ENST00000392449 TRMT61BQ9BVS5 477 aaKnown RBP17.93■□□□□ 0.46
PTPRK-208ENST00000392449 OXCT2Q9BYC2 517 aaPredicted RBP17.93■□□□□ 0.46
PTPRK-208ENST00000392449 BCO2Q9BYV7 579 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms