RNA–Protein interactions for RNA: ENST00000392246.6

SUMO1-203, Transcript of small ubiquitin-like modifier 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUMO1, Length 1,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-203ENST00000392246 RIN2Q8WYP3 895 aaPredicted RBP16.03■□□□□ 0.16
SUMO1-203ENST00000392246 GUCD1Q96NT3 240 aa16.03■□□□□ 0.16
SUMO1-203ENST00000392246 HSD3B7Q9H2F3 369 aa16.03■□□□□ 0.16
SUMO1-203ENST00000392246 RAB20Q9NX57 234 aa16.03■□□□□ 0.16
SUMO1-203ENST00000392246 MTCH2Q9Y6C9 303 aa16.03■□□□□ 0.16
SUMO1-203ENST00000392246 TRANK1O15050 2925 aa16.02■□□□□ 0.16
SUMO1-203ENST00000392246 C2CD2LO14523 706 aa16.02■□□□□ 0.15
SUMO1-203ENST00000392246 HUS1O60921 280 aa16.02■□□□□ 0.15
SUMO1-203ENST00000392246 LILRB3O75022 631 aa16.02■□□□□ 0.15
SUMO1-203ENST00000392246 CLSTN1O94985 981 aa16.02■□□□□ 0.15
SUMO1-203ENST00000392246 ASS1P00966 412 aaKnown RBP16.02■□□□□ 0.15
SUMO1-203ENST00000392246 TNNC1P63316 161 aa16.02■□□□□ 0.15
SUMO1-203ENST00000392246 PTPN14Q15678 1187 aa16.02■□□□□ 0.15
SUMO1-203ENST00000392246 VWA3BQ502W6 1294 aa16.02■□□□□ 0.15
SUMO1-203ENST00000392246 ZNF667Q5HYK9 610 aa16.02■□□□□ 0.15
SUMO1-203ENST00000392246 VARS2Q5ST30 1063 aaKnown RBP16.02■□□□□ 0.15
SUMO1-203ENST00000392246 ANKS3Q6ZW76 656 aa16.02■□□□□ 0.15
SUMO1-203ENST00000392246 DPH6Q7L8W6 267 aa16.02■□□□□ 0.15
SUMO1-203ENST00000392246 LNX1Q8TBB1 728 aaPredicted RBP16.02■□□□□ 0.15
SUMO1-203ENST00000392246 AUTS2Q8WXX7 1259 aa16.02■□□□□ 0.15
SUMO1-203ENST00000392246 MYLIPQ8WY64 445 aa16.02■□□□□ 0.15
SUMO1-203ENST00000392246 PIK3R5Q8WYR1 880 aa16.02■□□□□ 0.15
SUMO1-203ENST00000392246 PPP2R3CQ969Q6 453 aa16.02■□□□□ 0.15
SUMO1-203ENST00000392246 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.02■□□□□ 0.15
SUMO1-203ENST00000392246 PRRC2BQ5JSZ5 2229 aaKnown RBP16.01■□□□□ 0.15
SUMO1-203ENST00000392246 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.01■□□□□ 0.15
SUMO1-203ENST00000392246 C2orf71A6NGG8 1288 aa16.01■□□□□ 0.15
SUMO1-203ENST00000392246 H7C4K7 107 aa16.01■□□□□ 0.15
SUMO1-203ENST00000392246 CYP11A1P05108 521 aa16.01■□□□□ 0.15
SUMO1-203ENST00000392246 TPM2P07951 284 aa16.01■□□□□ 0.15
SUMO1-203ENST00000392246 P4HA1P13674 534 aa16.01■□□□□ 0.15
SUMO1-203ENST00000392246 TPM4P67936 248 aa16.01■□□□□ 0.15
SUMO1-203ENST00000392246 CREMQ03060 361 aa16.01■□□□□ 0.15
SUMO1-203ENST00000392246 YWHAHQ04917 246 aaPredicted RBP16.01■□□□□ 0.15
SUMO1-203ENST00000392246 MRPL58Q14197 206 aaKnown RBP16.01■□□□□ 0.15
SUMO1-203ENST00000392246 KRT31Q15323 416 aa16.01■□□□□ 0.15
SUMO1-203ENST00000392246 PSMD5Q16401 504 aa16.01■□□□□ 0.15
SUMO1-203ENST00000392246 WDR44Q5JSH3 913 aa16.01■□□□□ 0.15
SUMO1-203ENST00000392246 LUZP1Q86V48 1076 aa16.01■□□□□ 0.15
SUMO1-203ENST00000392246 METTL23Q86XA0 190 aa16.01■□□□□ 0.15
SUMO1-203ENST00000392246 TMEM86AQ8N2M4 240 aa16.01■□□□□ 0.15
SUMO1-203ENST00000392246 TOP6BLQ8N6T0 577 aa16.01■□□□□ 0.15
SUMO1-203ENST00000392246 SEMA4DQ92854 862 aa16.01■□□□□ 0.15
SUMO1-203ENST00000392246 MMS19Q96T76 1030 aa16.01■□□□□ 0.15
SUMO1-203ENST00000392246 ANP32EQ9BTT0 268 aa16.01■□□□□ 0.15
SUMO1-203ENST00000392246 PI4K2AQ9BTU6 479 aa16.01■□□□□ 0.15
SUMO1-203ENST00000392246 NDST4Q9H3R1 872 aa16.01■□□□□ 0.15
SUMO1-203ENST00000392246 NSUN3Q9H649 340 aaKnown RBP16.01■□□□□ 0.15
SUMO1-203ENST00000392246 NXF1Q9UBU9 619 aaKnown RBP16.01■□□□□ 0.15
SUMO1-203ENST00000392246 PCDHGC5Q9Y5F6 944 aa16.01■□□□□ 0.15
SUMO1-203ENST00000392246 TIMM13Q9Y5L4 95 aaPredicted RBP16.01■□□□□ 0.15
SUMO1-203ENST00000392246 HIDE1A8MVS5 230 aa16■□□□□ 0.15
SUMO1-203ENST00000392246 GOLGA6L19H0YKK7 550 aa16■□□□□ 0.15
SUMO1-203ENST00000392246 OAZ2O95190 189 aa16■□□□□ 0.15
SUMO1-203ENST00000392246 FAM163BP0C2L3 166 aa16■□□□□ 0.15
SUMO1-203ENST00000392246 NOP14P78316 857 aaKnown RBP16■□□□□ 0.15
SUMO1-203ENST00000392246 MIIPQ5JXC2 388 aa16■□□□□ 0.15
SUMO1-203ENST00000392246 WSCD1Q658N2 575 aa16■□□□□ 0.15
SUMO1-203ENST00000392246 OVOS1Q6IE37 1185 aa16■□□□□ 0.15
SUMO1-203ENST00000392246 PRSS55Q6UWB4 352 aaPredicted RBP16■□□□□ 0.15
SUMO1-203ENST00000392246 PDCL2Q8N4E4 241 aa16■□□□□ 0.15
SUMO1-203ENST00000392246 SPATA18Q8TC71 538 aa16■□□□□ 0.15
SUMO1-203ENST00000392246 EMILIN2Q9BXX0 1053 aa16■□□□□ 0.15
SUMO1-203ENST00000392246 RXFP1Q9HBX9 757 aa16■□□□□ 0.15
SUMO1-203ENST00000392246 TAB2Q9NYJ8 693 aa16■□□□□ 0.15
SUMO1-203ENST00000392246 FNIP2Q9P278 1114 aa16■□□□□ 0.15
SUMO1-203ENST00000392246 LIMA1Q9UHB6 759 aaKnown RBP16■□□□□ 0.15
SUMO1-203ENST00000392246 BACE2Q9Y5Z0 518 aa16■□□□□ 0.15
SUMO1-203ENST00000392246 GTPBP10A4D1E9 387 aaKnown RBP15.99■□□□□ 0.15
SUMO1-203ENST00000392246 LRRC10BA6NIK2 292 aa15.99■□□□□ 0.15
SUMO1-203ENST00000392246 PES1O00541 588 aaKnown RBP15.99■□□□□ 0.15
SUMO1-203ENST00000392246 LRRN2O75325 713 aa15.99■□□□□ 0.15
SUMO1-203ENST00000392246 FOSL2P15408 326 aa15.99■□□□□ 0.15
SUMO1-203ENST00000392246 SOWAHAQ2M3V2 549 aa15.99■□□□□ 0.15
SUMO1-203ENST00000392246 SPOPLQ6IQ16 392 aa15.99■□□□□ 0.15
SUMO1-203ENST00000392246 ZNF280DQ6N043 979 aa15.99■□□□□ 0.15
SUMO1-203ENST00000392246 LIMS2Q7Z4I7 341 aa15.99■□□□□ 0.15
SUMO1-203ENST00000392246 FAXDC2Q96IV6 333 aa15.99■□□□□ 0.15
SUMO1-203ENST00000392246 OXCT2Q9BYC2 517 aaPredicted RBP15.99■□□□□ 0.15
SUMO1-203ENST00000392246 VPS16Q9H269 839 aa15.99■□□□□ 0.15
SUMO1-203ENST00000392246 TLE6Q9H808 572 aa15.99■□□□□ 0.15
SUMO1-203ENST00000392246 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.99■□□□□ 0.155e-8■■■■■ 101.2
SUMO1-203ENST00000392246 MTRRQ9UBK8 725 aa15.99■□□□□ 0.15
SUMO1-203ENST00000392246 L1RE1Q9UN81 338 aa15.99■□□□□ 0.15
SUMO1-203ENST00000392246 POLIQ9UNA4 740 aa15.99■□□□□ 0.15
SUMO1-203ENST00000392246 TSC2P49815 1807 aa15.99■□□□□ 0.15
SUMO1-203ENST00000392246 CNPP09543 421 aaKnown RBP15.99■□□□□ 0.15
SUMO1-203ENST00000392246 ATP1A3P13637 1013 aa15.99■□□□□ 0.15
SUMO1-203ENST00000392246 LHX1P48742 406 aa15.99■□□□□ 0.15
SUMO1-203ENST00000392246 COPB1P53618 953 aaKnown RBP15.99■□□□□ 0.15
SUMO1-203ENST00000392246 CTXN3Q4LDR2 81 aa15.99■□□□□ 0.15
SUMO1-203ENST00000392246 GBP6Q6ZN66 633 aa15.99■□□□□ 0.15
SUMO1-203ENST00000392246 ADGRD2Q7Z7M1 963 aa15.99■□□□□ 0.15
SUMO1-203ENST00000392246 ADGRF2Q8IZF7 708 aa15.99■□□□□ 0.15
SUMO1-203ENST00000392246 THEM5Q8N1Q8 247 aa15.99■□□□□ 0.15
SUMO1-203ENST00000392246 EHBP1Q8NDI1 1231 aa15.99■□□□□ 0.15
SUMO1-203ENST00000392246 ELMO3Q96BJ8 720 aa15.99■□□□□ 0.15
SUMO1-203ENST00000392246 KLHL5Q96PQ7 755 aa15.99■□□□□ 0.15
SUMO1-203ENST00000392246 APOBEC3GQ9HC16 384 aaKnown RBP15.99■□□□□ 0.15
SUMO1-203ENST00000392246 TEX28O15482 410 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms