RNA–Protein interactions for RNA: ENST00000382004.7

RFX3-204, Transcript of regulatory factor X3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFX3, Length 9,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-204ENST00000382004 USP15Q9Y4E8 981 aaPredicted RBP6.12□□□□□ -1.43
RFX3-204ENST00000382004 ZHX2Q9Y6X8 837 aa6.12□□□□□ -1.43
RFX3-204ENST00000382004 SYNCRIPO60506 623 aaKnown RBP6.12□□□□□ -1.43
RFX3-204ENST00000382004 CYP7B1O75881 506 aa6.12□□□□□ -1.43
RFX3-204ENST00000382004 PDGFRBP09619 1106 aa6.12□□□□□ -1.43
RFX3-204ENST00000382004 SCP2P22307 547 aa6.12□□□□□ -1.43
RFX3-204ENST00000382004 PBLDP30039 288 aaPredicted RBP6.12□□□□□ -1.43
RFX3-204ENST00000382004 AVPR1AP37288 418 aa6.12□□□□□ -1.43
RFX3-204ENST00000382004 EIF2B5Q13144 721 aaKnown RBP6.12□□□□□ -1.43
RFX3-204ENST00000382004 MFSD14CQ5VZR4 134 aa6.12□□□□□ -1.43
RFX3-204ENST00000382004 FAM117BQ6P1L5 589 aa6.12□□□□□ -1.43
RFX3-204ENST00000382004 EPHX4Q8IUS5 362 aa6.12□□□□□ -1.43
RFX3-204ENST00000382004 DDI1Q8WTU0 396 aa6.12□□□□□ -1.43
RFX3-204ENST00000382004 CPA5Q8WXQ8 436 aa6.12□□□□□ -1.43
RFX3-204ENST00000382004 ERP27Q96DN0 273 aa6.12□□□□□ -1.43
RFX3-204ENST00000382004 ZNF512Q96ME7 567 aaPredicted RBP6.12□□□□□ -1.43
RFX3-204ENST00000382004 PUS7LQ9H0K6 701 aaKnown RBP6.12□□□□□ -1.43
RFX3-204ENST00000382004 AGO2Q9UKV8 859 aaKnown RBP6.12□□□□□ -1.43
RFX3-204ENST00000382004 PPIEQ9UNP9 301 aaKnown RBP6.12□□□□□ -1.43
RFX3-204ENST00000382004 MYO3BQ8WXR4 1341 aa6.12□□□□□ -1.43
RFX3-204ENST00000382004 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.12□□□□□ -1.43
RFX3-204ENST00000382004 USP17L5A8MUK1 530 aa6.12□□□□□ -1.43
RFX3-204ENST00000382004 PHF20L1A8MW92 1017 aa6.12□□□□□ -1.43
RFX3-204ENST00000382004 CYP26A1O43174 497 aa6.12□□□□□ -1.43
RFX3-204ENST00000382004 MAP3K13O43283 966 aa6.12□□□□□ -1.43
RFX3-204ENST00000382004 NUDT2P50583 147 aa6.12□□□□□ -1.43
RFX3-204ENST00000382004 NME5P56597 212 aa6.12□□□□□ -1.43
RFX3-204ENST00000382004 GSTA3Q16772 222 aa6.12□□□□□ -1.43
RFX3-204ENST00000382004 ZNF438Q7Z4V0 828 aa6.12□□□□□ -1.43
RFX3-204ENST00000382004 SH2D3CQ8N5H7 860 aa6.12□□□□□ -1.43
RFX3-204ENST00000382004 MAGED4Q96JG8 741 aa6.12□□□□□ -1.43
RFX3-204ENST00000382004 RNPC3Q96LT9 517 aaKnown RBP6.12□□□□□ -1.43
RFX3-204ENST00000382004 ZNF560Q96MR9 790 aa6.12□□□□□ -1.43
RFX3-204ENST00000382004 VIPAS39Q9H9C1 493 aa6.12□□□□□ -1.43
RFX3-204ENST00000382004 PIN4Q9Y237 131 aaKnown RBP6.12□□□□□ -1.43
RFX3-204ENST00000382004 SNTNA6NMZ2 147 aa6.12□□□□□ -1.43
RFX3-204ENST00000382004 GRAP2O75791 330 aa6.12□□□□□ -1.43
RFX3-204ENST00000382004 AKR1B1P15121 316 aa6.12□□□□□ -1.43
RFX3-204ENST00000382004 ZNF23P17027 643 aa6.12□□□□□ -1.43
RFX3-204ENST00000382004 PSMA4P25789 261 aaKnown RBP6.12□□□□□ -1.43
RFX3-204ENST00000382004 MAPKAPK2P49137 400 aa6.12□□□□□ -1.43
RFX3-204ENST00000382004 ARL6IP4Q66PJ3 421 aaKnown RBP6.12□□□□□ -1.43
RFX3-204ENST00000382004 CIAPIN1Q6FI81 312 aa6.12□□□□□ -1.43
RFX3-204ENST00000382004 TMC4Q7Z404 712 aa6.12□□□□□ -1.43
RFX3-204ENST00000382004 GPD1LQ8N335 351 aa6.12□□□□□ -1.43
RFX3-204ENST00000382004 POMGNT2Q8NAT1 580 aa6.12□□□□□ -1.43
RFX3-204ENST00000382004 ATL2Q8NHH9 583 aa6.12□□□□□ -1.43
RFX3-204ENST00000382004 MXD3Q9BW11 206 aa6.12□□□□□ -1.43
RFX3-204ENST00000382004 COPS7BQ9H9Q2 264 aaPredicted RBP6.12□□□□□ -1.43
RFX3-204ENST00000382004 VTA1Q9NP79 307 aa6.12□□□□□ -1.43
RFX3-204ENST00000382004 SYNJ1O43426 1573 aa6.12□□□□□ -1.43
RFX3-204ENST00000382004 SMIM31A0A1B0GVY4 71 aa6.12□□□□□ -1.43
RFX3-204ENST00000382004 USP17L15C9J2P7 530 aa6.12□□□□□ -1.43
RFX3-204ENST00000382004 USP17L13C9JLJ4 530 aa6.12□□□□□ -1.43
RFX3-204ENST00000382004 USP17L11C9JVI0 530 aa6.12□□□□□ -1.43
RFX3-204ENST00000382004 USP17L18D6R9N7 530 aa6.12□□□□□ -1.43
RFX3-204ENST00000382004 USP17L22D6RA61 530 aa6.12□□□□□ -1.43
RFX3-204ENST00000382004 USP17L17D6RBQ6 530 aa6.12□□□□□ -1.43
RFX3-204ENST00000382004 USP17L19D6RCP7 530 aa6.12□□□□□ -1.43
RFX3-204ENST00000382004 USP17L20D6RJB6 530 aa6.12□□□□□ -1.43
RFX3-204ENST00000382004 USP17L24Q0WX57 530 aa6.12□□□□□ -1.43
RFX3-204ENST00000382004 CHI3L2Q15782 390 aa6.12□□□□□ -1.43
RFX3-204ENST00000382004 UGP2Q16851 508 aa6.12□□□□□ -1.43
RFX3-204ENST00000382004 SCARA3Q6AZY7 606 aa6.12□□□□□ -1.43
RFX3-204ENST00000382004 PLEKHA7Q6IQ23 1121 aa6.12□□□□□ -1.43
RFX3-204ENST00000382004 USP17L6PQ6QN14 398 aa6.12□□□□□ -1.43
RFX3-204ENST00000382004 UBASH3BQ8TF42 649 aa6.12□□□□□ -1.43
RFX3-204ENST00000382004 ADI1Q9BV57 179 aa6.12□□□□□ -1.43
RFX3-204ENST00000382004 SMG5Q9UPR3 1016 aaKnown RBP6.12□□□□□ -1.43
RFX3-204ENST00000382004 SYCP2Q9BX26 1530 aa6.12□□□□□ -1.43
RFX3-204ENST00000382004 EEF2KO00418 725 aaKnown RBP6.11□□□□□ -1.43
RFX3-204ENST00000382004 ZNF185O15231 689 aa6.11□□□□□ -1.43
RFX3-204ENST00000382004 KCNJ6P48051 423 aa6.11□□□□□ -1.43
RFX3-204ENST00000382004 STX4Q12846 297 aa6.11□□□□□ -1.43
RFX3-204ENST00000382004 TTC39BQ5VTQ0 682 aaPredicted RBP6.11□□□□□ -1.43
RFX3-204ENST00000382004 RCOR2Q8IZ40 523 aa6.11□□□□□ -1.43
RFX3-204ENST00000382004 HOXC10Q9NYD6 342 aa6.11□□□□□ -1.43
RFX3-204ENST00000382004 PSMC3IPQ9P2W1 217 aaPredicted RBP6.11□□□□□ -1.43
RFX3-204ENST00000382004 FAM135BQ49AJ0 1406 aa6.11□□□□□ -1.43
RFX3-204ENST00000382004 A0A087X0T9 212 aa6.11□□□□□ -1.43
RFX3-204ENST00000382004 HOXD10P28358 340 aa6.11□□□□□ -1.43
RFX3-204ENST00000382004 GTF2E2P29084 291 aaKnown RBP6.11□□□□□ -1.43
RFX3-204ENST00000382004 MDH1P40925 334 aaKnown RBP6.11□□□□□ -1.43
RFX3-204ENST00000382004 PDZK1Q5T2W1 519 aa6.11□□□□□ -1.43
RFX3-204ENST00000382004 TRIQKQ629K1 86 aa6.11□□□□□ -1.43
RFX3-204ENST00000382004 ZNF57Q68EA5 555 aaPredicted RBP6.11□□□□□ -1.43
RFX3-204ENST00000382004 C3orf62Q6ZUJ4 267 aa6.11□□□□□ -1.43
RFX3-204ENST00000382004 STX12Q86Y82 276 aa6.11□□□□□ -1.43
RFX3-204ENST00000382004 MOSPD2Q8NHP6 518 aa6.11□□□□□ -1.43
RFX3-204ENST00000382004 DCAF4Q8WV16 495 aa6.11□□□□□ -1.43
RFX3-204ENST00000382004 PIF1Q9H611 641 aa6.11□□□□□ -1.43
RFX3-204ENST00000382004 ZNF304Q9HCX3 659 aa6.11□□□□□ -1.43
RFX3-204ENST00000382004 TMEM260Q9NX78 707 aa6.11□□□□□ -1.43
RFX3-204ENST00000382004 PADI4Q9UM07 663 aa6.11□□□□□ -1.43
RFX3-204ENST00000382004 AK9Q5TCS8 1911 aa6.11□□□□□ -1.43
RFX3-204ENST00000382004 PIK3C2GO75747 1445 aa6.11□□□□□ -1.43
RFX3-204ENST00000382004 SAC3D1A6NKF1 404 aa6.11□□□□□ -1.43
RFX3-204ENST00000382004 RTN2O75298 545 aa6.11□□□□□ -1.43
RFX3-204ENST00000382004 WEE2P0C1S8 567 aa6.11□□□□□ -1.43
RFX3-204ENST00000382004 OTUD4Q01804 1114 aaKnown RBP6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms