RNA–Protein interactions for RNA: ENST00000380871.4

NKX3-1-201, Transcript of NK3 homeobox 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NKX3-1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-201ENST00000380871 MIEF2Q96C03 454 aa17.23■□□□□ 0.35
NKX3-1-201ENST00000380871 FHDC1Q9C0D6 1143 aaPredicted RBP17.23■□□□□ 0.35
NKX3-1-201ENST00000380871 ELP3Q9H9T3 547 aa17.23■□□□□ 0.35
NKX3-1-201ENST00000380871 HOXC10Q9NYD6 342 aa17.23■□□□□ 0.35
NKX3-1-201ENST00000380871 PCNTO95613 3336 aa17.23■□□□□ 0.35
NKX3-1-201ENST00000380871 DIAPH2O60879 1101 aa17.23■□□□□ 0.35
NKX3-1-201ENST00000380871 SKAP2O75563 359 aaPredicted RBP17.23■□□□□ 0.35
NKX3-1-201ENST00000380871 SRGAP2CP0DJJ0 459 aa17.23■□□□□ 0.35
NKX3-1-201ENST00000380871 OSTNP61366 133 aa17.23■□□□□ 0.35
NKX3-1-201ENST00000380871 DNAJC3Q13217 504 aa17.23■□□□□ 0.35
NKX3-1-201ENST00000380871 RIPK1Q13546 671 aa17.23■□□□□ 0.35
NKX3-1-201ENST00000380871 VGLL4Q14135 290 aa17.23■□□□□ 0.35
NKX3-1-201ENST00000380871 P3H1Q32P28 736 aa17.23■□□□□ 0.35
NKX3-1-201ENST00000380871 ZFYVE27Q5T4F4 411 aa17.23■□□□□ 0.35
NKX3-1-201ENST00000380871 ATL2Q8NHH9 583 aa17.23■□□□□ 0.35
NKX3-1-201ENST00000380871 ASAP3Q8TDY4 903 aa17.23■□□□□ 0.35
NKX3-1-201ENST00000380871 ACSF2Q96CM8 615 aaPredicted RBP17.23■□□□□ 0.35
NKX3-1-201ENST00000380871 K7ERI5 159 aa17.22■□□□□ 0.35
NKX3-1-201ENST00000380871 DGAT1O75907 488 aa17.22■□□□□ 0.35
NKX3-1-201ENST00000380871 RNASELQ05823 741 aaKnown RBP17.22■□□□□ 0.35
NKX3-1-201ENST00000380871 ZNF365Q70YC5 407 aa17.22■□□□□ 0.35
NKX3-1-201ENST00000380871 APOBEC3FQ8IUX4 373 aaKnown RBP17.22■□□□□ 0.35
NKX3-1-201ENST00000380871 TMEM174Q8WUU8 243 aa17.22■□□□□ 0.35
NKX3-1-201ENST00000380871 TMEM237Q96Q45 408 aa17.22■□□□□ 0.35
NKX3-1-201ENST00000380871 RBM15Q96T37 977 aaKnown RBP eCLIP17.22■□□□□ 0.35
NKX3-1-201ENST00000380871 RXFP1Q9HBX9 757 aa17.22■□□□□ 0.35
NKX3-1-201ENST00000380871 GPRC5DQ9NZD1 345 aa17.22■□□□□ 0.35
NKX3-1-201ENST00000380871 C15orf41Q9Y2V0 281 aa17.22■□□□□ 0.35
NKX3-1-201ENST00000380871 MAPK13O15264 365 aa17.22■□□□□ 0.35
NKX3-1-201ENST00000380871 PMM2O15305 246 aa17.22■□□□□ 0.35
NKX3-1-201ENST00000380871 TMEM132AQ24JP5 1023 aa17.22■□□□□ 0.35
NKX3-1-201ENST00000380871 GSTA5Q7RTV2 222 aa17.22■□□□□ 0.35
NKX3-1-201ENST00000380871 TAS1R3Q7RTX0 852 aa17.22■□□□□ 0.35
NKX3-1-201ENST00000380871 ARHGEF3Q9NR81 526 aa17.22■□□□□ 0.35
NKX3-1-201ENST00000380871 GRID1Q9ULK0 1009 aa17.22■□□□□ 0.35
NKX3-1-201ENST00000380871 EIF4E1BA6NMX2 242 aaKnown RBP17.22■□□□□ 0.35
NKX3-1-201ENST00000380871 PAX7P23759 505 aa17.22■□□□□ 0.35
NKX3-1-201ENST00000380871 ATP5DP30049 168 aa17.22■□□□□ 0.35
NKX3-1-201ENST00000380871 PIK3CAP42336 1068 aa17.22■□□□□ 0.35
NKX3-1-201ENST00000380871 PSMC4P43686 418 aa17.22■□□□□ 0.35
NKX3-1-201ENST00000380871 ZNF394Q53GI3 561 aa17.22■□□□□ 0.35
NKX3-1-201ENST00000380871 CRELD2Q6UXH1 353 aaPredicted RBP17.22■□□□□ 0.35
NKX3-1-201ENST00000380871 ASRGL1Q7L266 308 aa17.22■□□□□ 0.35
NKX3-1-201ENST00000380871 RPAINQ86UA6 219 aa17.22■□□□□ 0.35
NKX3-1-201ENST00000380871 ZNF570Q96NI8 536 aa17.22■□□□□ 0.35
NKX3-1-201ENST00000380871 ST6GALNAC4Q9H4F1 302 aa17.22■□□□□ 0.35
NKX3-1-201ENST00000380871 NKIRAS1Q9NYS0 192 aa17.22■□□□□ 0.35
NKX3-1-201ENST00000380871 BTBD7Q9P203 1132 aa17.22■□□□□ 0.35
NKX3-1-201ENST00000380871 FBXO40Q9UH90 709 aa17.22■□□□□ 0.35
NKX3-1-201ENST00000380871 LOXHD1Q8IVV2 1947 aa17.21■□□□□ 0.35
NKX3-1-201ENST00000380871 PTPRJQ12913 1337 aa17.21■□□□□ 0.35
NKX3-1-201ENST00000380871 C19orf81C9J6K1 198 aa17.21■□□□□ 0.35
NKX3-1-201ENST00000380871 CDH16O75309 829 aa17.21■□□□□ 0.35
NKX3-1-201ENST00000380871 BANF1O75531 89 aa17.21■□□□□ 0.35
NKX3-1-201ENST00000380871 SUPT20HL2P0C7V6 817 aa17.21■□□□□ 0.35
NKX3-1-201ENST00000380871 ALADP13716 330 aa17.21■□□□□ 0.35
NKX3-1-201ENST00000380871 ATP4AP20648 1035 aa17.21■□□□□ 0.35
NKX3-1-201ENST00000380871 GCAP28676 217 aa17.21■□□□□ 0.35
NKX3-1-201ENST00000380871 MSH2P43246 934 aa17.21■□□□□ 0.35
NKX3-1-201ENST00000380871 NSFP46459 744 aaKnown RBP17.21■□□□□ 0.35
NKX3-1-201ENST00000380871 MTM1Q13496 603 aa17.21■□□□□ 0.35
NKX3-1-201ENST00000380871 LY6KQ17RY6 165 aa17.21■□□□□ 0.35
NKX3-1-201ENST00000380871 SUPT20HL1Q3ZLR7 823 aa17.21■□□□□ 0.35
NKX3-1-201ENST00000380871 ABHD15Q6UXT9 468 aa17.21■□□□□ 0.35
NKX3-1-201ENST00000380871 TEX2Q8IWB9 1127 aa17.21■□□□□ 0.35
NKX3-1-201ENST00000380871 SLC17A8Q8NDX2 589 aa17.21■□□□□ 0.35
NKX3-1-201ENST00000380871 MCPH1Q8NEM0 835 aa17.21■□□□□ 0.35
NKX3-1-201ENST00000380871 KCNV2Q8TDN2 545 aa17.21■□□□□ 0.35
NKX3-1-201ENST00000380871 UTP4Q969X6 686 aaKnown RBP17.21■□□□□ 0.35
NKX3-1-201ENST00000380871 HAUS1Q96CS2 278 aa17.21■□□□□ 0.35
NKX3-1-201ENST00000380871 OSBPL8Q9BZF1 889 aa17.21■□□□□ 0.35
NKX3-1-201ENST00000380871 C1orf112Q9NSG2 853 aa17.21■□□□□ 0.35
NKX3-1-201ENST00000380871 MAP3K20Q9NYL2 800 aaKnown RBP17.21■□□□□ 0.35
NKX3-1-201ENST00000380871 DONSONQ9NYP3 566 aa17.21■□□□□ 0.35
NKX3-1-201ENST00000380871 POC1B-GALNT4F8VUJ3 575 aa17.21■□□□□ 0.35
NKX3-1-201ENST00000380871 C4orf33Q8N1A6 199 aa17.21■□□□□ 0.35
NKX3-1-201ENST00000380871 LRRC71Q8N4P6 559 aa17.21■□□□□ 0.35
NKX3-1-201ENST00000380871 CLMNQ96JQ2 1002 aa17.21■□□□□ 0.35
NKX3-1-201ENST00000380871 MAGEB18Q96M61 343 aa17.21■□□□□ 0.35
NKX3-1-201ENST00000380871 MFSD14AQ96MC6 490 aa17.21■□□□□ 0.35
NKX3-1-201ENST00000380871 PITPNM3Q9BZ71 974 aa17.21■□□□□ 0.35
NKX3-1-201ENST00000380871 SAYSD1Q9NPB0 183 aa17.21■□□□□ 0.35
NKX3-1-201ENST00000380871 STBD1O95210 358 aa17.2■□□□□ 0.34
NKX3-1-201ENST00000380871 MTFR1Q15390 333 aa17.2■□□□□ 0.34
NKX3-1-201ENST00000380871 XKR3Q5GH77 459 aa17.2■□□□□ 0.34
NKX3-1-201ENST00000380871 GRK7Q8WTQ7 553 aa17.2■□□□□ 0.34
NKX3-1-201ENST00000380871 SLC7A3Q8WY07 619 aa17.2■□□□□ 0.34
NKX3-1-201ENST00000380871 MYLK2Q9H1R3 596 aa17.2■□□□□ 0.34
NKX3-1-201ENST00000380871 ETNK1Q9HBU6 452 aa17.2■□□□□ 0.34
NKX3-1-201ENST00000380871 EURLQ9NYK6 297 aa17.2■□□□□ 0.34
NKX3-1-201ENST00000380871 ADAM22Q9P0K1 906 aa17.2■□□□□ 0.34
NKX3-1-201ENST00000380871 KLHL14Q9P2G3 628 aa17.2■□□□□ 0.34
NKX3-1-201ENST00000380871 LGALS13Q9UHV8 139 aa17.2■□□□□ 0.34
NKX3-1-201ENST00000380871 AGO2Q9UKV8 859 aaKnown RBP17.2■□□□□ 0.34
NKX3-1-201ENST00000380871 TTLL13PA6NNM8 815 aa17.2■□□□□ 0.34
NKX3-1-201ENST00000380871 USP2O75604 605 aaPredicted RBP17.2■□□□□ 0.34
NKX3-1-201ENST00000380871 PROSCO94903 275 aa17.2■□□□□ 0.34
NKX3-1-201ENST00000380871 MAGEA4P43358 317 aa17.2■□□□□ 0.34
NKX3-1-201ENST00000380871 WDR44Q5JSH3 913 aa17.2■□□□□ 0.34
NKX3-1-201ENST00000380871 ARHGEF18Q6ZSZ5 1173 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms