RNA–Protein interactions for RNA: ENST00000380815.4

GMDS-202, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GMDS, Length 1,752 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-202ENST00000380815 RASGEF1CQ8N431 466 aa22.89■■□□□ 1.25
GMDS-202ENST00000380815 USP38Q8NB14 1042 aa22.89■■□□□ 1.25
GMDS-202ENST00000380815 CD99L2Q8TCZ2 262 aa22.89■■□□□ 1.25
GMDS-202ENST00000380815 ZMAT2Q96NC0 199 aaKnown RBP22.89■■□□□ 1.25
GMDS-202ENST00000380815 ZSWIM1Q9BR11 485 aa22.89■■□□□ 1.25
GMDS-202ENST00000380815 ZNF518BQ9C0D4 1074 aa22.89■■□□□ 1.25
GMDS-202ENST00000380815 TRPV2Q9Y5S1 764 aa22.89■■□□□ 1.25
GMDS-202ENST00000380815 CEP104O60308 925 aa22.88■■□□□ 1.25
GMDS-202ENST00000380815 GNRH1P01148 92 aa22.88■■□□□ 1.25
GMDS-202ENST00000380815 RRM1P23921 792 aa22.88■■□□□ 1.25
GMDS-202ENST00000380815 BRD2P25440 801 aaKnown RBP22.88■■□□□ 1.25
GMDS-202ENST00000380815 RAP1GAPP47736 663 aa22.88■■□□□ 1.25
GMDS-202ENST00000380815 MYO1EQ12965 1108 aa22.88■■□□□ 1.25
GMDS-202ENST00000380815 MESDQ14696 234 aa22.88■■□□□ 1.25
GMDS-202ENST00000380815 FAM47CQ5HY64 1035 aa22.88■■□□□ 1.25
GMDS-202ENST00000380815 LIN9Q5TKA1 542 aa22.88■■□□□ 1.25
GMDS-202ENST00000380815 TTC39CQ8N584 583 aa22.88■■□□□ 1.25
GMDS-202ENST00000380815 PCSK9Q8NBP7 692 aaKnown RBP22.88■■□□□ 1.25
GMDS-202ENST00000380815 SDCBP2Q9H190 292 aa22.88■■□□□ 1.25
GMDS-202ENST00000380815 SMYD3Q9H7B4 428 aa22.88■■□□□ 1.25
GMDS-202ENST00000380815 RBM12Q9NTZ6 932 aaKnown RBP22.88■■□□□ 1.25
GMDS-202ENST00000380815 ADAM22Q9P0K1 906 aa22.88■■□□□ 1.25
GMDS-202ENST00000380815 CDY2AQ9Y6F7 541 aa22.88■■□□□ 1.25
GMDS-202ENST00000380815 CILPO75339 1184 aa22.87■■□□□ 1.25
GMDS-202ENST00000380815 CDH5P33151 784 aaPredicted RBP22.87■■□□□ 1.25
GMDS-202ENST00000380815 CDH8P55286 799 aa22.87■■□□□ 1.25
GMDS-202ENST00000380815 TMCO3Q6UWJ1 677 aa22.87■■□□□ 1.25
GMDS-202ENST00000380815 FAM228AQ86W67 206 aa22.87■■□□□ 1.25
GMDS-202ENST00000380815 BEST2Q8NFU1 509 aa22.87■■□□□ 1.25
GMDS-202ENST00000380815 TFAP2BQ92481 460 aa22.87■■□□□ 1.25
GMDS-202ENST00000380815 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.87■■□□□ 1.251e-6■□□□□ 11
GMDS-202ENST00000380815 CARD9Q9H257 536 aa22.87■■□□□ 1.25
GMDS-202ENST00000380815 CXCL16Q9H2A7 254 aa22.87■■□□□ 1.25
GMDS-202ENST00000380815 TTC7AQ9ULT0 858 aaPredicted RBP22.87■■□□□ 1.25
GMDS-202ENST00000380815 NOC2LQ9Y3T9 749 aaKnown RBP22.87■■□□□ 1.25
GMDS-202ENST00000380815 PGRMC1O00264 195 aaKnown RBP22.86■■□□□ 1.25
GMDS-202ENST00000380815 COMTP21964 271 aa22.86■■□□□ 1.25
GMDS-202ENST00000380815 MCM3P25205 808 aa22.86■■□□□ 1.25
GMDS-202ENST00000380815 RAD23BP54727 409 aa22.86■■□□□ 1.25
GMDS-202ENST00000380815 XKR4Q5GH76 650 aa22.86■■□□□ 1.25
GMDS-202ENST00000380815 UBL4BQ8N7F7 174 aa22.86■■□□□ 1.25
GMDS-202ENST00000380815 TMEM35BQ8NCS4 154 aa22.86■■□□□ 1.25
GMDS-202ENST00000380815 PXYLP1Q8TE99 480 aa22.86■■□□□ 1.25
GMDS-202ENST00000380815 WHAMMQ8TF30 809 aa22.86■■□□□ 1.25
GMDS-202ENST00000380815 HNRNPLLQ8WVV9 542 aaKnown RBP22.86■■□□□ 1.25
GMDS-202ENST00000380815 C11orf70Q9BRQ4 267 aa22.86■■□□□ 1.25
GMDS-202ENST00000380815 TMEM59LQ9UK28 342 aa22.86■■□□□ 1.25
GMDS-202ENST00000380815 MED7O43513 233 aa22.86■■□□□ 1.25
GMDS-202ENST00000380815 MMP8P22894 467 aa22.86■■□□□ 1.25
GMDS-202ENST00000380815 AKAP5P24588 427 aa22.86■■□□□ 1.25
GMDS-202ENST00000380815 SSTR3P32745 418 aaPredicted RBP22.86■■□□□ 1.25
GMDS-202ENST00000380815 TNNC1P63316 161 aa22.86■■□□□ 1.25
GMDS-202ENST00000380815 INCA1Q0VD86 236 aa22.86■■□□□ 1.25
GMDS-202ENST00000380815 PTP4A2Q12974 167 aa22.86■■□□□ 1.25
GMDS-202ENST00000380815 CD101Q93033 1021 aa22.86■■□□□ 1.25
GMDS-202ENST00000380815 SENP6Q9GZR1 1112 aaPredicted RBP22.86■■□□□ 1.25
GMDS-202ENST00000380815 WNT8AQ9H1J5 351 aa22.86■■□□□ 1.25
GMDS-202ENST00000380815 MRPL47Q9HD33 250 aaKnown RBP22.86■■□□□ 1.25
GMDS-202ENST00000380815 DDX20Q9UHI6 824 aaKnown RBP22.86■■□□□ 1.25
GMDS-202ENST00000380815 UBQLN1Q9UMX0 589 aaKnown RBP22.86■■□□□ 1.25
GMDS-202ENST00000380815 TMEM110-MUSTN1A8MSY1 372 aa22.85■■□□□ 1.25
GMDS-202ENST00000380815 KCNE1P15382 129 aa22.85■■□□□ 1.25
GMDS-202ENST00000380815 GLE1Q53GS7 698 aaKnown RBP22.85■■□□□ 1.25
GMDS-202ENST00000380815 CC2D1AQ6P1N0 951 aaPredicted RBP22.85■■□□□ 1.25
GMDS-202ENST00000380815 MMS22LQ6ZRQ5 1243 aa22.85■■□□□ 1.25
GMDS-202ENST00000380815 LRRC52Q8N7C0 313 aa22.85■■□□□ 1.25
GMDS-202ENST00000380815 WNT8BQ93098 351 aa22.85■■□□□ 1.25
GMDS-202ENST00000380815 RNF216Q9NWF9 866 aaPredicted RBP22.85■■□□□ 1.25
GMDS-202ENST00000380815 ZNF446Q9NWS9 450 aa22.85■■□□□ 1.25
GMDS-202ENST00000380815 ANAPC7Q9UJX3 599 aa22.85■■□□□ 1.25
GMDS-202ENST00000380815 IPPQ9Y573 584 aa22.85■■□□□ 1.25
GMDS-202ENST00000380815 CEP83Q9Y592 693 aa22.85■■□□□ 1.25
GMDS-202ENST00000380815 GRIN2DO15399 1336 aa22.84■■□□□ 1.25
GMDS-202ENST00000380815 TRIP11Q15643 1979 aa22.84■■□□□ 1.25
GMDS-202ENST00000380815 RNASE9P60153 205 aaKnown RBP22.84■■□□□ 1.25
GMDS-202ENST00000380815 VSNL1P62760 191 aa22.84■■□□□ 1.25
GMDS-202ENST00000380815 DCAF12L1Q5VU92 463 aa22.84■■□□□ 1.25
GMDS-202ENST00000380815 PLEKHA7Q6IQ23 1121 aa22.84■■□□□ 1.25
GMDS-202ENST00000380815 SLC4A11Q8NBS3 891 aa22.84■■□□□ 1.25
GMDS-202ENST00000380815 SMG8Q8ND04 991 aaKnown RBP22.84■■□□□ 1.25
GMDS-202ENST00000380815 RAET1EQ8TD07 263 aa22.84■■□□□ 1.25
GMDS-202ENST00000380815 RUBCNQ92622 972 aa22.84■■□□□ 1.25
GMDS-202ENST00000380815 TMEM176AQ96HP8 235 aa22.84■■□□□ 1.25
GMDS-202ENST00000380815 BTBD6Q96KE9 485 aa22.84■■□□□ 1.25
GMDS-202ENST00000380815 APOL6Q9BWW8 343 aa22.84■■□□□ 1.25
GMDS-202ENST00000380815 LHX5Q9H2C1 402 aa22.84■■□□□ 1.25
GMDS-202ENST00000380815 ARFGAP3Q9NP61 516 aa22.84■■□□□ 1.25
GMDS-202ENST00000380815 TUBGCP4Q9UGJ1 667 aa22.84■■□□□ 1.25
GMDS-202ENST00000380815 BARX2Q9UMQ3 279 aaPredicted RBP22.84■■□□□ 1.25
GMDS-202ENST00000380815 SCINQ9Y6U3 715 aa22.84■■□□□ 1.25
GMDS-202ENST00000380815 THSD7BQ9C0I4 1608 aa22.84■■□□□ 1.25
GMDS-202ENST00000380815 SMIM28A0A1B0GU29 152 aa22.84■■□□□ 1.25
GMDS-202ENST00000380815 ERLIN1O75477 346 aa22.84■■□□□ 1.25
GMDS-202ENST00000380815 RPS6KA5O75582 802 aa22.84■■□□□ 1.25
GMDS-202ENST00000380815 CABYRO75952 493 aa22.84■■□□□ 1.25
GMDS-202ENST00000380815 CD4P01730 458 aa22.84■■□□□ 1.25
GMDS-202ENST00000380815 CHRNA1P02708 482 aa22.84■■□□□ 1.25
GMDS-202ENST00000380815 MYCNP04198 464 aaPredicted RBP22.84■■□□□ 1.25
GMDS-202ENST00000380815 CALB1P05937 261 aa22.84■■□□□ 1.25
GMDS-202ENST00000380815 CD19P15391 556 aa22.84■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms