RNA–Protein interactions for RNA: ENST00000380445.7

VPS16-202, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS16, Length 2,750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-202ENST00000380445 EGFL6Q8IUX8 553 aa13.41□□□□□ -0.26
VPS16-202ENST00000380445 ZDHHC14Q8IZN3 488 aa13.41□□□□□ -0.26
VPS16-202ENST00000380445 FEZF2Q8TBJ5 459 aa13.41□□□□□ -0.26
VPS16-202ENST00000380445 RNPEPQ9H4A4 650 aa13.41□□□□□ -0.26
VPS16-202ENST00000380445 ATP8A1Q9Y2Q0 1164 aa13.41□□□□□ -0.26
VPS16-202ENST00000380445 COL1A2P08123 1366 aa13.4□□□□□ -0.26
VPS16-202ENST00000380445 LGALS2P05162 132 aa13.4□□□□□ -0.26
VPS16-202ENST00000380445 INSRRP14616 1297 aa13.4□□□□□ -0.26
VPS16-202ENST00000380445 EIF4BP23588 611 aaKnown RBP13.4□□□□□ -0.26
VPS16-202ENST00000380445 GCLCP48506 637 aaPredicted RBP13.4□□□□□ -0.26
VPS16-202ENST00000380445 TAP1Q03518 808 aa13.4□□□□□ -0.26
VPS16-202ENST00000380445 PPP1R7Q15435 360 aa13.4□□□□□ -0.26
VPS16-202ENST00000380445 PPTC7Q8NI37 304 aa13.4□□□□□ -0.26
VPS16-202ENST00000380445 EMID1Q96A84 441 aaPredicted RBP13.4□□□□□ -0.26
VPS16-202ENST00000380445 TXLNGYQ9BZA5 131 aa13.4□□□□□ -0.26
VPS16-202ENST00000380445 TCRBV7S2A1N4TA0A589 114 aa13.4□□□□□ -0.26
VPS16-202ENST00000380445 CFHP08603 1231 aa13.4□□□□□ -0.26
VPS16-202ENST00000380445 CD58P19256 250 aa13.4□□□□□ -0.26
VPS16-202ENST00000380445 ADORA2AP29274 412 aa13.4□□□□□ -0.26
VPS16-202ENST00000380445 GTF2A2P52657 109 aa13.4□□□□□ -0.26
VPS16-202ENST00000380445 GNGT1P63211 74 aa13.4□□□□□ -0.26
VPS16-202ENST00000380445 ZNF844Q08AG5 666 aa13.4□□□□□ -0.26
VPS16-202ENST00000380445 IFFO1Q0D2I5 559 aa13.4□□□□□ -0.26
VPS16-202ENST00000380445 CALCOCO2Q13137 446 aa13.4□□□□□ -0.26
VPS16-202ENST00000380445 SLMAPQ14BN4 828 aa13.4□□□□□ -0.26
VPS16-202ENST00000380445 AGBL2Q5U5Z8 902 aa13.4□□□□□ -0.26
VPS16-202ENST00000380445 TAPT1Q6NXT6 567 aa13.4□□□□□ -0.26
VPS16-202ENST00000380445 CROCCP2Q86T23 111 aa13.4□□□□□ -0.26
VPS16-202ENST00000380445 IFNLR1Q8IU57 520 aaPredicted RBP13.4□□□□□ -0.26
VPS16-202ENST00000380445 FBXO25Q8TCJ0 367 aa13.4□□□□□ -0.26
VPS16-202ENST00000380445 DDX27Q96GQ7 796 aaKnown RBP13.4□□□□□ -0.26
VPS16-202ENST00000380445 PCDHGC3Q9UN70 934 aa13.4□□□□□ -0.26
VPS16-202ENST00000380445 MCM3APO60318 1980 aa13.4□□□□□ -0.27
VPS16-202ENST00000380445 RBM47A0AV96 593 aaKnown RBP13.39□□□□□ -0.27
VPS16-202ENST00000380445 PDHXO00330 501 aa13.39□□□□□ -0.27
VPS16-202ENST00000380445 MED7O43513 233 aa13.39□□□□□ -0.27
VPS16-202ENST00000380445 MCF2P10911 925 aa13.39□□□□□ -0.27
VPS16-202ENST00000380445 RPL21P46778 160 aaKnown RBP13.39□□□□□ -0.27
VPS16-202ENST00000380445 PMS2P54278 862 aa13.39□□□□□ -0.27
VPS16-202ENST00000380445 GSCP56915 257 aaPredicted RBP13.39□□□□□ -0.27
VPS16-202ENST00000380445 C2CD6Q53TS8 623 aa13.39□□□□□ -0.27
VPS16-202ENST00000380445 DNAJC21Q5F1R6 531 aaKnown RBP13.39□□□□□ -0.27
VPS16-202ENST00000380445 SWT1Q5T5J6 900 aaKnown RBP13.39□□□□□ -0.27
VPS16-202ENST00000380445 PHLDB2Q86SQ0 1253 aa13.39□□□□□ -0.27
VPS16-202ENST00000380445 KATNAL2Q8IYT4 538 aa13.39□□□□□ -0.27
VPS16-202ENST00000380445 SH2D3CQ8N5H7 860 aa13.39□□□□□ -0.27
VPS16-202ENST00000380445 TRIM7Q9C029 511 aa13.39□□□□□ -0.27
VPS16-202ENST00000380445 CDT1Q9H211 546 aa13.39□□□□□ -0.27
VPS16-202ENST00000380445 PABPC3Q9H361 631 aaKnown RBP13.39□□□□□ -0.27
VPS16-202ENST00000380445 CENPHQ9H3R5 247 aa13.39□□□□□ -0.27
VPS16-202ENST00000380445 GRHL1Q9NZI5 618 aa13.39□□□□□ -0.27
VPS16-202ENST00000380445 EIF3HO15372 352 aaKnown RBP eCLIP13.39□□□□□ -0.27
VPS16-202ENST00000380445 GAS8O95995 478 aa13.39□□□□□ -0.27
VPS16-202ENST00000380445 GJB1P08034 283 aa13.39□□□□□ -0.27
VPS16-202ENST00000380445 OSTNP61366 133 aa13.39□□□□□ -0.27
VPS16-202ENST00000380445 IGBP1P78318 339 aa13.39□□□□□ -0.27
VPS16-202ENST00000380445 ZDHHC24Q6UX98 284 aa13.39□□□□□ -0.27
VPS16-202ENST00000380445 HOOK3Q86VS8 718 aa13.39□□□□□ -0.27
VPS16-202ENST00000380445 CCDC50Q8IVM0 306 aa13.39□□□□□ -0.27
VPS16-202ENST00000380445 SUGP1Q8IWZ8 645 aaKnown RBP13.39□□□□□ -0.27
VPS16-202ENST00000380445 EXD1Q8NHP7 514 aa13.39□□□□□ -0.27
VPS16-202ENST00000380445 STRIP2Q9ULQ0 834 aa13.39□□□□□ -0.27
VPS16-202ENST00000380445 PTPN22Q9Y2R2 807 aa13.39□□□□□ -0.27
VPS16-202ENST00000380445 B4GALT5O43286 388 aa13.38□□□□□ -0.27
VPS16-202ENST00000380445 ZEB2O60315 1214 aa13.38□□□□□ -0.27
VPS16-202ENST00000380445 NUDT17P0C025 328 aa13.38□□□□□ -0.27
VPS16-202ENST00000380445 CDH5P33151 784 aaPredicted RBP13.38□□□□□ -0.27
VPS16-202ENST00000380445 LACTBP83111 547 aaPredicted RBP13.38□□□□□ -0.27
VPS16-202ENST00000380445 ZNF667Q5HYK9 610 aa13.38□□□□□ -0.27
VPS16-202ENST00000380445 EEF1DP3Q658K8 133 aa13.38□□□□□ -0.27
VPS16-202ENST00000380445 XYLT2Q9H1B5 865 aa13.38□□□□□ -0.27
VPS16-202ENST00000380445 ASB7Q9H672 318 aa13.38□□□□□ -0.27
VPS16-202ENST00000380445 IFT122Q9HBG6 1241 aa13.38□□□□□ -0.27
VPS16-202ENST00000380445 AKT3Q9Y243 479 aa13.38□□□□□ -0.27
VPS16-202ENST00000380445 POLR2BP30876 1174 aaKnown RBP13.38□□□□□ -0.27
VPS16-202ENST00000380445 SATB1Q01826 763 aa13.38□□□□□ -0.27
VPS16-202ENST00000380445 TMEM63BQ5T3F8 832 aa13.38□□□□□ -0.27
VPS16-202ENST00000380445 DENND2CQ68D51 928 aa13.38□□□□□ -0.27
VPS16-202ENST00000380445 DNAJC24Q6P3W2 148 aa13.38□□□□□ -0.27
VPS16-202ENST00000380445 OR2W6PQ8NHA6 318 aa13.38□□□□□ -0.27
VPS16-202ENST00000380445 ATL2Q8NHH9 583 aa13.38□□□□□ -0.27
VPS16-202ENST00000380445 ART4Q93070 314 aa13.38□□□□□ -0.27
VPS16-202ENST00000380445 ZNF668Q96K58 619 aaPredicted RBP13.38□□□□□ -0.27
VPS16-202ENST00000380445 MINDY3Q9H8M7 445 aa13.38□□□□□ -0.27
VPS16-202ENST00000380445 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.38□□□□□ -0.27
VPS16-202ENST00000380445 WHRNQ9P202 907 aa13.38□□□□□ -0.27
VPS16-202ENST00000380445 SCN4AP35499 1836 aa13.38□□□□□ -0.27
VPS16-202ENST00000380445 KRT19P08727 400 aa13.37□□□□□ -0.27
VPS16-202ENST00000380445 WEE2P0C1S8 567 aa13.37□□□□□ -0.27
VPS16-202ENST00000380445 CXCL8P10145 99 aa13.37□□□□□ -0.27
VPS16-202ENST00000380445 SSR1P43307 286 aaKnown RBP13.37□□□□□ -0.27
VPS16-202ENST00000380445 ASPAP45381 313 aa13.37□□□□□ -0.27
VPS16-202ENST00000380445 KCNJ1P48048 391 aa13.37□□□□□ -0.27
VPS16-202ENST00000380445 GPR162Q16538 588 aa13.37□□□□□ -0.27
VPS16-202ENST00000380445 KRT71Q3SY84 523 aa13.37□□□□□ -0.27
VPS16-202ENST00000380445 ZNF394Q53GI3 561 aa13.37□□□□□ -0.27
VPS16-202ENST00000380445 LLGL2Q6P1M3 1020 aa13.37□□□□□ -0.27
VPS16-202ENST00000380445 DCUN1D2Q6PH85 259 aa13.37□□□□□ -0.27
VPS16-202ENST00000380445 ERICH1Q86X53 443 aa13.37□□□□□ -0.27
VPS16-202ENST00000380445 C1orf54Q8WWF1 131 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms