RNA–Protein interactions for RNA: ENST00000380443.5

VPS16-201, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 1 (best)

Gene VPS16, Length 1,825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-201ENST00000380443 H3BRB1 525 aa24.57■■□□□ 1.52
VPS16-201ENST00000380443 B4GALT5O43286 388 aa24.57■■□□□ 1.52
VPS16-201ENST00000380443 COILP38432 576 aaPredicted RBP24.57■■□□□ 1.52
VPS16-201ENST00000380443 ADCYAP1R1P41586 468 aa24.57■■□□□ 1.52
VPS16-201ENST00000380443 IGBP1P78318 339 aa24.57■■□□□ 1.52
VPS16-201ENST00000380443 AMHR2Q16671 573 aa24.57■■□□□ 1.52
VPS16-201ENST00000380443 CCDC137Q6PK04 289 aaKnown RBP24.57■■□□□ 1.52
VPS16-201ENST00000380443 SYDE1Q6ZW31 735 aaPredicted RBP24.57■■□□□ 1.52
VPS16-201ENST00000380443 ZNF410Q86VK4 478 aa24.57■■□□□ 1.52
VPS16-201ENST00000380443 DDX42Q86XP3 938 aaKnown RBP eCLIP24.57■■□□□ 1.52
VPS16-201ENST00000380443 RHOT1Q8IXI2 618 aa24.57■■□□□ 1.52
VPS16-201ENST00000380443 FEZF2Q8TBJ5 459 aa24.57■■□□□ 1.52
VPS16-201ENST00000380443 MAML3Q96JK9 1138 aa24.57■■□□□ 1.52
VPS16-201ENST00000380443 TUT1Q9H6E5 874 aaKnown RBP24.57■■□□□ 1.52
VPS16-201ENST00000380443 AKT3Q9Y243 479 aa24.57■■□□□ 1.52
VPS16-201ENST00000380443 FAM170AA1A519 330 aa24.56■■□□□ 1.52
VPS16-201ENST00000380443 RRN3P2A6NIE6 340 aa24.56■■□□□ 1.52
VPS16-201ENST00000380443 MED7O43513 233 aa24.56■■□□□ 1.52
VPS16-201ENST00000380443 SREBF2Q12772 1141 aa24.56■■□□□ 1.52
VPS16-201ENST00000380443 APBB1IPQ7Z5R6 666 aaPredicted RBP24.56■■□□□ 1.52
VPS16-201ENST00000380443 ADAT2Q7Z6V5 191 aaKnown RBP24.56■■□□□ 1.52
VPS16-201ENST00000380443 VRTNQ9H8Y1 702 aa24.56■■□□□ 1.52
VPS16-201ENST00000380443 A0A087WZ62 844 aa24.56■■□□□ 1.52
VPS16-201ENST00000380443 MANSC4A6NHS7 340 aaPredicted RBP24.56■■□□□ 1.52
VPS16-201ENST00000380443 RPS6KA5O75582 802 aa24.56■■□□□ 1.52
VPS16-201ENST00000380443 GJB1P08034 283 aa24.56■■□□□ 1.52
VPS16-201ENST00000380443 PAEPP09466 180 aa24.56■■□□□ 1.52
VPS16-201ENST00000380443 STAG3L1P0CL83 205 aa24.56■■□□□ 1.52
VPS16-201ENST00000380443 CETN2P41208 172 aa24.56■■□□□ 1.52
VPS16-201ENST00000380443 INHBEP58166 350 aa24.56■■□□□ 1.52
VPS16-201ENST00000380443 SIX1Q15475 284 aaPredicted RBP24.56■■□□□ 1.52
VPS16-201ENST00000380443 ZNF667Q5HYK9 610 aa24.56■■□□□ 1.52
VPS16-201ENST00000380443 AADACL2Q6P093 401 aa24.56■■□□□ 1.52
VPS16-201ENST00000380443 FMO2Q99518 471 aa24.56■■□□□ 1.52
VPS16-201ENST00000380443 FDXACB1Q9BRP7 624 aaPredicted RBP24.56■■□□□ 1.52
VPS16-201ENST00000380443 TINF2Q9BSI4 451 aa24.56■■□□□ 1.52
VPS16-201ENST00000380443 BEGAINQ9BUH8 593 aa24.56■■□□□ 1.52
VPS16-201ENST00000380443 CYP3A43Q9HB55 503 aa24.56■■□□□ 1.52
VPS16-201ENST00000380443 GOLGA6L10A6NI86 522 aa24.55■■□□□ 1.52
VPS16-201ENST00000380443 GPR25O00155 361 aa24.55■■□□□ 1.52
VPS16-201ENST00000380443 RARAP10276 462 aa24.55■■□□□ 1.52
VPS16-201ENST00000380443 P4HA1P13674 534 aa24.55■■□□□ 1.52
VPS16-201ENST00000380443 HSD17B3P37058 310 aa24.55■■□□□ 1.52
VPS16-201ENST00000380443 ASPAP45381 313 aa24.55■■□□□ 1.52
VPS16-201ENST00000380443 ACVR2BQ13705 512 aa24.55■■□□□ 1.52
VPS16-201ENST00000380443 DGKDQ16760 1214 aa24.55■■□□□ 1.52
VPS16-201ENST00000380443 MMS22LQ6ZRQ5 1243 aa24.55■■□□□ 1.52
VPS16-201ENST00000380443 KATNAL2Q8IYT4 538 aa24.55■■□□□ 1.52
VPS16-201ENST00000380443 TTC39CQ8N584 583 aa24.55■■□□□ 1.52
VPS16-201ENST00000380443 TRIM51Q9BSJ1 452 aa24.55■■□□□ 1.52
VPS16-201ENST00000380443 BCO2Q9BYV7 579 aa24.55■■□□□ 1.52
VPS16-201ENST00000380443 NEUROG2Q9H2A3 272 aa24.55■■□□□ 1.52
VPS16-201ENST00000380443 LHX5Q9H2C1 402 aa24.55■■□□□ 1.52
VPS16-201ENST00000380443 PDZD7Q9H5P4 517 aa24.55■■□□□ 1.52
VPS16-201ENST00000380443 TLR3O15455 904 aaKnown RBP24.54■■□□□ 1.52
VPS16-201ENST00000380443 PPFIA2O75334 1257 aa24.54■■□□□ 1.52
VPS16-201ENST00000380443 EMC10Q5UCC4 262 aa24.54■■□□□ 1.52
VPS16-201ENST00000380443 LEKR1Q6ZMV7 388 aa24.54■■□□□ 1.52
VPS16-201ENST00000380443 TMC3Q7Z5M5 1100 aa24.54■■□□□ 1.52
VPS16-201ENST00000380443 PASD1Q8IV76 773 aa24.54■■□□□ 1.52
VPS16-201ENST00000380443 C18orf8Q96DM3 657 aa24.54■■□□□ 1.52
VPS16-201ENST00000380443 DDX27Q96GQ7 796 aaKnown RBP24.54■■□□□ 1.52
VPS16-201ENST00000380443 DPH5Q9H2P9 285 aa24.54■■□□□ 1.52
VPS16-201ENST00000380443 STRIP2Q9ULQ0 834 aa24.54■■□□□ 1.52
VPS16-201ENST00000380443 PLAAQ9Y263 795 aa24.54■■□□□ 1.52
VPS16-201ENST00000380443 ZNF236Q9UL36 1845 aa24.54■■□□□ 1.52
VPS16-201ENST00000380443 EVPLQ92817 2033 aa24.54■■□□□ 1.52
VPS16-201ENST00000380443 ANK1P16157 1881 aa24.54■■□□□ 1.52
VPS16-201ENST00000380443 HMGB1P1B2RPK0 211 aaPredicted RBP24.54■■□□□ 1.52
VPS16-201ENST00000380443 MMP3P08254 477 aa24.54■■□□□ 1.52
VPS16-201ENST00000380443 CFHP08603 1231 aa24.54■■□□□ 1.52
VPS16-201ENST00000380443 IQCF3P0C7M6 154 aa24.54■■□□□ 1.52
VPS16-201ENST00000380443 CXCL8P10145 99 aa24.54■■□□□ 1.52
VPS16-201ENST00000380443 CAPN2P17655 700 aa24.54■■□□□ 1.52
VPS16-201ENST00000380443 POLR2BP30876 1174 aaKnown RBP24.54■■□□□ 1.52
VPS16-201ENST00000380443 PCBP1Q15365 356 aaKnown RBP eCLIP24.54■■□□□ 1.52
VPS16-201ENST00000380443 GJC2Q5T442 439 aaPredicted RBP24.54■■□□□ 1.52
VPS16-201ENST00000380443 LRRC38Q5VT99 294 aa24.54■■□□□ 1.52
VPS16-201ENST00000380443 RUFY4Q6ZNE9 571 aa24.54■■□□□ 1.52
VPS16-201ENST00000380443 OR6J1Q8NGC5 347 aa24.54■■□□□ 1.52
VPS16-201ENST00000380443 ZIC5Q96T25 663 aa24.54■■□□□ 1.52
VPS16-201ENST00000380443 ZDHHC18Q9NUE0 388 aa24.54■■□□□ 1.52
VPS16-201ENST00000380443 LACTBL1A8MY62 500 aa24.53■■□□□ 1.52
VPS16-201ENST00000380443 STAU1O95793 577 aaKnown RBP24.53■■□□□ 1.52
VPS16-201ENST00000380443 ACTN2P35609 894 aa24.53■■□□□ 1.52
VPS16-201ENST00000380443 EIF3BP55884 814 aaKnown RBP24.53■■□□□ 1.52
VPS16-201ENST00000380443 GRIK4Q16099 956 aa24.53■■□□□ 1.52
VPS16-201ENST00000380443 CCDC105Q8IYK2 499 aa24.53■■□□□ 1.52
VPS16-201ENST00000380443 ZDHHC14Q8IZN3 488 aa24.53■■□□□ 1.52
VPS16-201ENST00000380443 EXD1Q8NHP7 514 aa24.53■■□□□ 1.52
VPS16-201ENST00000380443 GRK7Q8WTQ7 553 aa24.53■■□□□ 1.52
VPS16-201ENST00000380443 ADPGKQ9BRR6 497 aa24.53■■□□□ 1.52
VPS16-201ENST00000380443 MTRF1LQ9UGC7 380 aaKnown RBP24.53■■□□□ 1.52
VPS16-201ENST00000380443 TMEM191CA6NGB0 347 aa24.52■■□□□ 1.52
VPS16-201ENST00000380443 SMPD1P17405 629 aa24.52■■□□□ 1.52
VPS16-201ENST00000380443 CD58P19256 250 aa24.52■■□□□ 1.52
VPS16-201ENST00000380443 LACTBP83111 547 aaPredicted RBP24.52■■□□□ 1.52
VPS16-201ENST00000380443 SKOR1P84550 965 aa24.52■■□□□ 1.52
VPS16-201ENST00000380443 CEP120Q8N960 986 aa24.52■■□□□ 1.52
VPS16-201ENST00000380443 TXLNGYQ9BZA5 131 aa24.52■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms