RNA–Protein interactions for RNA: ENST00000379446.9

NEDD9-202, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NEDD9, Length 4,536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-202ENST00000379446 KRT83P78385 493 aa6.92□□□□□ -1.3
NEDD9-202ENST00000379446 CREB5Q02930 508 aa6.92□□□□□ -1.3
NEDD9-202ENST00000379446 PRPSAP1Q14558 356 aa6.92□□□□□ -1.3
NEDD9-202ENST00000379446 TYW1BQ6NUM6 668 aa6.92□□□□□ -1.3
NEDD9-202ENST00000379446 TMEM270Q6UE05 265 aa6.92□□□□□ -1.3
NEDD9-202ENST00000379446 ANKS3Q6ZW76 656 aa6.92□□□□□ -1.3
NEDD9-202ENST00000379446 NPAS4Q8IUM7 802 aa6.92□□□□□ -1.3
NEDD9-202ENST00000379446 GJD3Q8N144 294 aa6.92□□□□□ -1.3
NEDD9-202ENST00000379446 ZNF513Q8N8E2 541 aaPredicted RBP6.92□□□□□ -1.3
NEDD9-202ENST00000379446 CCDC89Q8N998 374 aa6.92□□□□□ -1.3
NEDD9-202ENST00000379446 ZNF579Q8NAF0 562 aaKnown RBP6.92□□□□□ -1.3
NEDD9-202ENST00000379446 SLC7A14Q8TBB6 771 aa6.92□□□□□ -1.3
NEDD9-202ENST00000379446 AUTS2Q8WXX7 1259 aa6.92□□□□□ -1.3
NEDD9-202ENST00000379446 PIK3R5Q8WYR1 880 aa6.92□□□□□ -1.3
NEDD9-202ENST00000379446 AK8Q96MA6 479 aa6.92□□□□□ -1.3
NEDD9-202ENST00000379446 FUT8Q9BYC5 575 aa6.92□□□□□ -1.3
NEDD9-202ENST00000379446 TMEM117Q9H0C3 514 aa6.92□□□□□ -1.3
NEDD9-202ENST00000379446 SLC32A1Q9H598 525 aa6.92□□□□□ -1.3
NEDD9-202ENST00000379446 CD248Q9HCU0 757 aa6.92□□□□□ -1.3
NEDD9-202ENST00000379446 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP6.92□□□□□ -1.3
NEDD9-202ENST00000379446 EP300Q09472 2414 aaPredicted RBP6.92□□□□□ -1.3
NEDD9-202ENST00000379446 SLC12A8A0AV02 714 aa6.91□□□□□ -1.3
NEDD9-202ENST00000379446 MYO1FO00160 1098 aa6.91□□□□□ -1.3
NEDD9-202ENST00000379446 RFXAPO00287 272 aa6.91□□□□□ -1.3
NEDD9-202ENST00000379446 WNT7AO00755 349 aa6.91□□□□□ -1.3
NEDD9-202ENST00000379446 GYPCP04921 128 aa6.91□□□□□ -1.3
NEDD9-202ENST00000379446 KCNA3P22001 575 aa6.91□□□□□ -1.3
NEDD9-202ENST00000379446 PNPLA4P41247 253 aa6.91□□□□□ -1.3
NEDD9-202ENST00000379446 PRCPP42785 496 aa6.91□□□□□ -1.3
NEDD9-202ENST00000379446 BYSLQ13895 437 aaKnown RBP6.91□□□□□ -1.3
NEDD9-202ENST00000379446 VWA3BQ502W6 1294 aa6.91□□□□□ -1.3
NEDD9-202ENST00000379446 CEP85LQ5SZL2 805 aa6.91□□□□□ -1.3
NEDD9-202ENST00000379446 ACBD5Q5T8D3 534 aaPredicted RBP6.91□□□□□ -1.3
NEDD9-202ENST00000379446 PI4K2AQ9BTU6 479 aa6.91□□□□□ -1.3
NEDD9-202ENST00000379446 C1QTNF1Q9BXJ1 281 aa6.91□□□□□ -1.3
NEDD9-202ENST00000379446 NSUN3Q9H649 340 aaKnown RBP6.91□□□□□ -1.3
NEDD9-202ENST00000379446 ABHD10Q9NUJ1 306 aa6.91□□□□□ -1.3
NEDD9-202ENST00000379446 ITM2BQ9Y287 266 aa6.91□□□□□ -1.3
NEDD9-202ENST00000379446 HES2Q9Y543 173 aa6.91□□□□□ -1.3
NEDD9-202ENST00000379446 H7C0C1 242 aa6.91□□□□□ -1.3
NEDD9-202ENST00000379446 APODP05090 189 aa6.91□□□□□ -1.3
NEDD9-202ENST00000379446 CA4P22748 312 aa6.91□□□□□ -1.3
NEDD9-202ENST00000379446 ATP5OP48047 213 aa6.91□□□□□ -1.3
NEDD9-202ENST00000379446 GCLMP48507 274 aa6.91□□□□□ -1.3
NEDD9-202ENST00000379446 IFT88Q13099 833 aa6.91□□□□□ -1.3
NEDD9-202ENST00000379446 UAP1Q16222 522 aaPredicted RBP6.91□□□□□ -1.3
NEDD9-202ENST00000379446 SLC39A12Q504Y0 691 aa6.91□□□□□ -1.3
NEDD9-202ENST00000379446 TCP11X2Q5H9J9 407 aa6.91□□□□□ -1.3
NEDD9-202ENST00000379446 LDLRAD1Q5T700 205 aa6.91□□□□□ -1.3
NEDD9-202ENST00000379446 ZNF618Q5T7W0 954 aa6.91□□□□□ -1.3
NEDD9-202ENST00000379446 DSG4Q86SJ6 1040 aa6.91□□□□□ -1.3
NEDD9-202ENST00000379446 ABRAQ8N0Z2 381 aa6.91□□□□□ -1.3
NEDD9-202ENST00000379446 VGLL2Q8N8G2 317 aa6.91□□□□□ -1.3
NEDD9-202ENST00000379446 KREMEN2Q8NCW0 462 aa6.91□□□□□ -1.3
NEDD9-202ENST00000379446 SAMD11Q96NU1 681 aa6.91□□□□□ -1.3
NEDD9-202ENST00000379446 IRF2BPLQ9H1B7 796 aa6.91□□□□□ -1.3
NEDD9-202ENST00000379446 DSEQ9UL01 958 aa6.91□□□□□ -1.3
NEDD9-202ENST00000379446 PRPSAP2O60256 369 aa6.91□□□□□ -1.3
NEDD9-202ENST00000379446 AP1G2O75843 785 aa6.91□□□□□ -1.3
NEDD9-202ENST00000379446 ATP5BP06576 529 aaKnown RBP6.91□□□□□ -1.3
NEDD9-202ENST00000379446 FAM200BP0CF97 657 aa6.91□□□□□ -1.3
NEDD9-202ENST00000379446 FGFR1P11362 822 aa6.91□□□□□ -1.3
NEDD9-202ENST00000379446 HOXA7P31268 230 aaPredicted RBP6.91□□□□□ -1.3
NEDD9-202ENST00000379446 AKT1P31749 480 aa6.91□□□□□ -1.3
NEDD9-202ENST00000379446 RGS7P49802 495 aa6.91□□□□□ -1.3
NEDD9-202ENST00000379446 KLHL30Q0D2K2 578 aa6.91□□□□□ -1.3
NEDD9-202ENST00000379446 PLCL1Q15111 1095 aa6.91□□□□□ -1.3
NEDD9-202ENST00000379446 MFSD5Q6N075 450 aa6.91□□□□□ -1.3
NEDD9-202ENST00000379446 DNAJC24Q6P3W2 148 aa6.91□□□□□ -1.3
NEDD9-202ENST00000379446 SLC27A1Q6PCB7 646 aa6.91□□□□□ -1.3
NEDD9-202ENST00000379446 ERICH1Q86X53 443 aa6.91□□□□□ -1.3
NEDD9-202ENST00000379446 KSR1Q8IVT5 923 aa6.91□□□□□ -1.3
NEDD9-202ENST00000379446 NAT16Q8N8M0 369 aa6.91□□□□□ -1.3
NEDD9-202ENST00000379446 CCDC51Q96ER9 411 aa6.91□□□□□ -1.3
NEDD9-202ENST00000379446 IFT43Q96FT9 208 aa6.91□□□□□ -1.3
NEDD9-202ENST00000379446 RPRD1AQ96P16 312 aaPredicted RBP6.91□□□□□ -1.3
NEDD9-202ENST00000379446 TTPALQ9BTX7 342 aa6.91□□□□□ -1.3
NEDD9-202ENST00000379446 TRMT61BQ9BVS5 477 aaKnown RBP6.91□□□□□ -1.3
NEDD9-202ENST00000379446 CPSF2Q9P2I0 782 aaKnown RBP6.91□□□□□ -1.3
NEDD9-202ENST00000379446 PCDHB11Q9Y5F2 797 aa6.91□□□□□ -1.3
NEDD9-202ENST00000379446 SAR1BQ9Y6B6 198 aa6.91□□□□□ -1.3
NEDD9-202ENST00000379446 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP6.91□□□□□ -1.3
NEDD9-202ENST00000379446 TTC26A0AVF1 554 aa6.91□□□□□ -1.3
NEDD9-202ENST00000379446 NDUFA10O95299 355 aa6.91□□□□□ -1.3
NEDD9-202ENST00000379446 ASS1P00966 412 aaKnown RBP6.91□□□□□ -1.3
NEDD9-202ENST00000379446 C8AP07357 584 aa6.91□□□□□ -1.3
NEDD9-202ENST00000379446 RHBDL3P58872 404 aa6.91□□□□□ -1.3
NEDD9-202ENST00000379446 CKAP4Q07065 602 aaKnown RBP6.91□□□□□ -1.3
NEDD9-202ENST00000379446 ZNF177Q13360 481 aaPredicted RBP6.91□□□□□ -1.3
NEDD9-202ENST00000379446 PDCLQ13371 301 aa6.91□□□□□ -1.3
NEDD9-202ENST00000379446 TRIM14Q14142 442 aa6.91□□□□□ -1.3
NEDD9-202ENST00000379446 GIT2Q14161 759 aa6.91□□□□□ -1.3
NEDD9-202ENST00000379446 PPP1R7Q15435 360 aa6.91□□□□□ -1.3
NEDD9-202ENST00000379446 SHHQ15465 462 aa6.91□□□□□ -1.3
NEDD9-202ENST00000379446 SEL1L2Q5TEA6 688 aa6.91□□□□□ -1.3
NEDD9-202ENST00000379446 DDX42Q86XP3 938 aaKnown RBP eCLIP6.91□□□□□ -1.3
NEDD9-202ENST00000379446 TMEM192Q8IY95 271 aa6.91□□□□□ -1.3
NEDD9-202ENST00000379446 NRSN1Q8IZ57 195 aa6.91□□□□□ -1.3
NEDD9-202ENST00000379446 CPA6Q8N4T0 437 aa6.91□□□□□ -1.3
NEDD9-202ENST00000379446 DNAAF3Q8N9W5 541 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms