RNA–Protein interactions for RNA: ENST00000378512.5

RER1-202, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 1 (best) BASIC

Gene RER1, Length 1,404 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-202ENST00000378512 KIAA1586Q9HCI6 787 aa18.39■□□□□ 0.53
RER1-202ENST00000378512 CIZ1Q9ULV3 898 aaPredicted RBP18.39■□□□□ 0.53
RER1-202ENST00000378512 PI15O43692 258 aa18.38■□□□□ 0.53
RER1-202ENST00000378512 RHOBTB3O94955 611 aa18.38■□□□□ 0.53
RER1-202ENST00000378512 C8AP07357 584 aa18.38■□□□□ 0.53
RER1-202ENST00000378512 ATF2P15336 505 aa18.38■□□□□ 0.53
RER1-202ENST00000378512 NPR3P17342 541 aa18.38■□□□□ 0.53
RER1-202ENST00000378512 TPGS2Q68CL5 300 aa18.38■□□□□ 0.53
RER1-202ENST00000378512 GET4Q7L5D6 327 aaPredicted RBP18.38■□□□□ 0.53
RER1-202ENST00000378512 FMR1NBQ8N0W7 255 aaPredicted RBP18.38■□□□□ 0.53
RER1-202ENST00000378512 C1orf127Q8N9H9 656 aa18.38■□□□□ 0.53
RER1-202ENST00000378512 FLCNQ8NFG4 579 aa18.38■□□□□ 0.53
RER1-202ENST00000378512 ENGASEQ8NFI3 743 aa18.38■□□□□ 0.53
RER1-202ENST00000378512 PIDD1Q9HB75 910 aa18.38■□□□□ 0.53
RER1-202ENST00000378512 MAFFQ9ULX9 164 aa18.38■□□□□ 0.53
RER1-202ENST00000378512 DUSP12Q9UNI6 340 aa18.38■□□□□ 0.53
RER1-202ENST00000378512 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.37■□□□□ 0.53
RER1-202ENST00000378512 ARHGEF37A1IGU5 675 aa18.37■□□□□ 0.53
RER1-202ENST00000378512 ZNF233A6NK53 670 aa18.37■□□□□ 0.53
RER1-202ENST00000378512 RPN1P04843 607 aaKnown RBP18.37■□□□□ 0.53
RER1-202ENST00000378512 PRR29P0C7W0 189 aa18.37■□□□□ 0.53
RER1-202ENST00000378512 YWHAHQ04917 246 aaPredicted RBP18.37■□□□□ 0.53
RER1-202ENST00000378512 SNW1Q13573 536 aaKnown RBP18.37■□□□□ 0.53
RER1-202ENST00000378512 CTXN3Q4LDR2 81 aa18.37■□□□□ 0.53
RER1-202ENST00000378512 LIN9Q5TKA1 542 aa18.37■□□□□ 0.53
RER1-202ENST00000378512 CBWD2Q8IUF1 395 aa18.37■□□□□ 0.53
RER1-202ENST00000378512 NELFCDQ8IXH7 590 aa18.37■□□□□ 0.53
RER1-202ENST00000378512 TCEAL8Q8IYN2 117 aa18.37■□□□□ 0.53
RER1-202ENST00000378512 SENP8Q96LD8 212 aa18.37■□□□□ 0.53
RER1-202ENST00000378512 KCTD10Q9H3F6 313 aa18.37■□□□□ 0.53
RER1-202ENST00000378512 PDE11AQ9HCR9 933 aa18.37■□□□□ 0.53
RER1-202ENST00000378512 EXOC1Q9NV70 894 aa18.37■□□□□ 0.53
RER1-202ENST00000378512 GALR2O43603 387 aaPredicted RBP18.36■□□□□ 0.53
RER1-202ENST00000378512 CFHP08603 1231 aa18.36■□□□□ 0.53
RER1-202ENST00000378512 TAF6P49848 677 aa18.36■□□□□ 0.53
RER1-202ENST00000378512 KCNB1Q14721 858 aa18.36■□□□□ 0.53
RER1-202ENST00000378512 SURF1Q15526 300 aa18.36■□□□□ 0.53
RER1-202ENST00000378512 ASTLQ6HA08 431 aaPredicted RBP18.36■□□□□ 0.53
RER1-202ENST00000378512 HS2ST1Q7LGA3 356 aa18.36■□□□□ 0.53
RER1-202ENST00000378512 GRASPQ7Z6J2 395 aaPredicted RBP18.36■□□□□ 0.53
RER1-202ENST00000378512 SLC9A9Q8IVB4 645 aa18.36■□□□□ 0.53
RER1-202ENST00000378512 SLC7A14Q8TBB6 771 aa18.36■□□□□ 0.53
RER1-202ENST00000378512 CACTINQ8WUQ7 758 aaKnown RBP18.36■□□□□ 0.53
RER1-202ENST00000378512 PRRX2Q99811 253 aa18.36■□□□□ 0.53
RER1-202ENST00000378512 MFSD1Q9H3U5 465 aa18.36■□□□□ 0.53
RER1-202ENST00000378512 INTS13Q9NVM9 706 aa18.36■□□□□ 0.53
RER1-202ENST00000378512 DMAC2Q9NW81 257 aa18.36■□□□□ 0.53
RER1-202ENST00000378512 EPS15L1Q9UBC2 864 aa18.36■□□□□ 0.53
RER1-202ENST00000378512 PTPRJQ12913 1337 aa18.36■□□□□ 0.53
RER1-202ENST00000378512 ODC1P11926 461 aa18.35■□□□□ 0.53
RER1-202ENST00000378512 SNRNP35Q16560 246 aaKnown RBP18.35■□□□□ 0.53
RER1-202ENST00000378512 PPM1LQ5SGD2 360 aa18.35■□□□□ 0.53
RER1-202ENST00000378512 SCARA3Q6AZY7 606 aa18.35■□□□□ 0.53
RER1-202ENST00000378512 DSTYKQ6XUX3 929 aa18.35■□□□□ 0.53
RER1-202ENST00000378512 SIX5Q8N196 739 aa18.35■□□□□ 0.53
RER1-202ENST00000378512 LRRC52Q8N7C0 313 aa18.35■□□□□ 0.53
RER1-202ENST00000378512 XXYLT1Q8NBI6 393 aa18.35■□□□□ 0.53
RER1-202ENST00000378512 GOLGA5Q8TBA6 731 aa18.35■□□□□ 0.53
RER1-202ENST00000378512 ATOH1Q92858 354 aaPredicted RBP18.35■□□□□ 0.53
RER1-202ENST00000378512 GZF1Q9H116 711 aaPredicted RBP18.35■□□□□ 0.53
RER1-202ENST00000378512 AFF4Q9UHB7 1163 aaKnown RBP18.35■□□□□ 0.53
RER1-202ENST00000378512 SIX4Q9UIU6 781 aa18.35■□□□□ 0.53
RER1-202ENST00000378512 ITGA11Q9UKX5 1188 aa18.35■□□□□ 0.53
RER1-202ENST00000378512 TIMM13Q9Y5L4 95 aaPredicted RBP18.35■□□□□ 0.53
RER1-202ENST00000378512 KRBA1A5PL33 1030 aa18.34■□□□□ 0.53
RER1-202ENST00000378512 OR6C75A6NL08 312 aa18.34■□□□□ 0.53
RER1-202ENST00000378512 PDXKO00764 312 aa18.34■□□□□ 0.53
RER1-202ENST00000378512 CLIC2O15247 247 aa18.34■□□□□ 0.53
RER1-202ENST00000378512 CCL16O15467 120 aa18.34■□□□□ 0.53
RER1-202ENST00000378512 VNN2O95498 520 aa18.34■□□□□ 0.53
RER1-202ENST00000378512 LAMP2P13473 410 aa18.34■□□□□ 0.53
RER1-202ENST00000378512 PNPLA4P41247 253 aa18.34■□□□□ 0.53
RER1-202ENST00000378512 TFAMQ00059 246 aaKnown RBP18.34■□□□□ 0.53
RER1-202ENST00000378512 MYBPC2Q14324 1141 aa18.34■□□□□ 0.53
RER1-202ENST00000378512 OVOS1Q6IE37 1185 aa18.34■□□□□ 0.53
RER1-202ENST00000378512 WDR49Q8IV35 697 aa18.34■□□□□ 0.53
RER1-202ENST00000378512 SLC44A3Q8N4M1 653 aa18.34■□□□□ 0.53
RER1-202ENST00000378512 ZNF560Q96MR9 790 aa18.34■□□□□ 0.53
RER1-202ENST00000378512 RPP25Q9BUL9 199 aaKnown RBP18.34■□□□□ 0.53
RER1-202ENST00000378512 HCFC1R1Q9NWW0 138 aa18.34■□□□□ 0.53
RER1-202ENST00000378512 IGSF9Q9P2J2 1179 aa18.34■□□□□ 0.53
RER1-202ENST00000378512 FBXL21Q9UKT6 434 aa18.34■□□□□ 0.53
RER1-202ENST00000378512 CACNA1HO95180 2353 aa18.34■□□□□ 0.53
RER1-202ENST00000378512 COL4A3Q01955 1670 aa18.33■□□□□ 0.53
RER1-202ENST00000378512 KPNA7A9QM74 516 aa18.33■□□□□ 0.53
RER1-202ENST00000378512 SEC24AO95486 1093 aa18.33■□□□□ 0.53
RER1-202ENST00000378512 ITGB3P05106 788 aa18.33■□□□□ 0.53
RER1-202ENST00000378512 CYP24A1Q07973 514 aa18.33■□□□□ 0.53
RER1-202ENST00000378512 GPR17Q13304 367 aa18.33■□□□□ 0.53
RER1-202ENST00000378512 PSMD6Q15008 389 aa18.33■□□□□ 0.53
RER1-202ENST00000378512 SV2CQ496J9 727 aa18.33■□□□□ 0.53
RER1-202ENST00000378512 OR5B17Q8NGF7 314 aa18.33■□□□□ 0.53
RER1-202ENST00000378512 SPATA20Q8TB22 786 aa18.33■□□□□ 0.53
RER1-202ENST00000378512 RTP3Q9BQQ7 232 aa18.33■□□□□ 0.53
RER1-202ENST00000378512 MTMR12Q9C0I1 747 aa18.33■□□□□ 0.53
RER1-202ENST00000378512 AVENQ9NQS1 362 aaPredicted RBP18.33■□□□□ 0.53
RER1-202ENST00000378512 GDAP2Q9NXN4 497 aa18.33■□□□□ 0.53
RER1-202ENST00000378512 DSEQ9UL01 958 aa18.33■□□□□ 0.53
RER1-202ENST00000378512 CA14Q9ULX7 337 aa18.33■□□□□ 0.53
RER1-202ENST00000378512 CYB561D2O14569 222 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms