RNA–Protein interactions for RNA: ENST00000378387.3

ARHGEF39-201, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ARHGEF39, Length 3,769 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-201ENST00000378387 RFC4P35249 363 aa11.09□□□□□ -0.63
ARHGEF39-201ENST00000378387 CAV1Q03135 178 aa11.09□□□□□ -0.63
ARHGEF39-201ENST00000378387 DMPKQ09013 629 aa11.09□□□□□ -0.63
ARHGEF39-201ENST00000378387 COG2Q14746 738 aa11.09□□□□□ -0.63
ARHGEF39-201ENST00000378387 EDRF1Q3B7T1 1238 aa11.09□□□□□ -0.63
ARHGEF39-201ENST00000378387 SH3D19Q5HYK7 790 aa11.09□□□□□ -0.63
ARHGEF39-201ENST00000378387 PATL1Q86TB9 770 aaKnown RBP11.09□□□□□ -0.63
ARHGEF39-201ENST00000378387 RHPN2Q8IUC4 686 aa11.09□□□□□ -0.63
ARHGEF39-201ENST00000378387 CLEC10AQ8IUN9 316 aa11.09□□□□□ -0.63
ARHGEF39-201ENST00000378387 ZDHHC14Q8IZN3 488 aa11.09□□□□□ -0.63
ARHGEF39-201ENST00000378387 THAP11Q96EK4 314 aa11.09□□□□□ -0.63
ARHGEF39-201ENST00000378387 CCT7Q99832 543 aa11.09□□□□□ -0.63
ARHGEF39-201ENST00000378387 RIOK1Q9BRS2 568 aaKnown RBP11.09□□□□□ -0.63
ARHGEF39-201ENST00000378387 SELENONQ9NZV5 590 aa11.09□□□□□ -0.63
ARHGEF39-201ENST00000378387 C3P01024 1663 aa11.09□□□□□ -0.63
ARHGEF39-201ENST00000378387 C15orf38-AP3S2A0A0A6YYH1 394 aa11.09□□□□□ -0.63
ARHGEF39-201ENST00000378387 COPEO14579 308 aa11.09□□□□□ -0.63
ARHGEF39-201ENST00000378387 SGPL1O95470 568 aa11.09□□□□□ -0.63
ARHGEF39-201ENST00000378387 TFPTP0C1Z6 253 aa11.09□□□□□ -0.63
ARHGEF39-201ENST00000378387 KRT10P13645 584 aa11.09□□□□□ -0.63
ARHGEF39-201ENST00000378387 ETS1P14921 441 aa11.09□□□□□ -0.63
ARHGEF39-201ENST00000378387 MAN1A1P33908 653 aa11.09□□□□□ -0.63
ARHGEF39-201ENST00000378387 AQP5P55064 265 aa11.09□□□□□ -0.63
ARHGEF39-201ENST00000378387 BASP1P80723 227 aaKnown RBP11.09□□□□□ -0.63
ARHGEF39-201ENST00000378387 CDK16Q00536 496 aa11.09□□□□□ -0.63
ARHGEF39-201ENST00000378387 USH1GQ495M9 461 aa11.09□□□□□ -0.63
ARHGEF39-201ENST00000378387 SLC30A10Q6XR72 485 aa11.09□□□□□ -0.63
ARHGEF39-201ENST00000378387 STXBP4Q6ZWJ1 553 aa11.09□□□□□ -0.63
ARHGEF39-201ENST00000378387 UTS2BQ765I0 119 aa11.09□□□□□ -0.63
ARHGEF39-201ENST00000378387 ARPINQ7Z6K5 226 aa11.09□□□□□ -0.63
ARHGEF39-201ENST00000378387 STKLD1Q8NE28 680 aa11.09□□□□□ -0.63
ARHGEF39-201ENST00000378387 AGR3Q8TD06 166 aa11.09□□□□□ -0.63
ARHGEF39-201ENST00000378387 LZICQ8WZA0 190 aa11.09□□□□□ -0.63
ARHGEF39-201ENST00000378387 TMEM117Q9H0C3 514 aa11.09□□□□□ -0.63
ARHGEF39-201ENST00000378387 SMIM31A0A1B0GVY4 71 aa11.08□□□□□ -0.63
ARHGEF39-201ENST00000378387 E2F6O75461 281 aa11.08□□□□□ -0.63
ARHGEF39-201ENST00000378387 PCP11498 1178 aaKnown RBP11.08□□□□□ -0.63
ARHGEF39-201ENST00000378387 RAG1P15918 1043 aa11.08□□□□□ -0.63
ARHGEF39-201ENST00000378387 PSMC1P62191 440 aaKnown RBP11.08□□□□□ -0.63
ARHGEF39-201ENST00000378387 MRPS9P82933 396 aaKnown RBP11.08□□□□□ -0.63
ARHGEF39-201ENST00000378387 TTLL12Q14166 644 aaPredicted RBP11.08□□□□□ -0.63
ARHGEF39-201ENST00000378387 PLEKHG4Q58EX7 1191 aa11.08□□□□□ -0.63
ARHGEF39-201ENST00000378387 FAM182AQ5T1J6 154 aa11.08□□□□□ -0.63
ARHGEF39-201ENST00000378387 RSPH3Q86UC2 560 aa11.08□□□□□ -0.63
ARHGEF39-201ENST00000378387 CRLF3Q8IUI8 442 aa11.08□□□□□ -0.63
ARHGEF39-201ENST00000378387 PASD1Q8IV76 773 aa11.08□□□□□ -0.63
ARHGEF39-201ENST00000378387 ACSF2Q96CM8 615 aaPredicted RBP11.08□□□□□ -0.63
ARHGEF39-201ENST00000378387 MAK16Q9BXY0 300 aaKnown RBP11.08□□□□□ -0.63
ARHGEF39-201ENST00000378387 IL17RBQ9NRM6 502 aa11.08□□□□□ -0.63
ARHGEF39-201ENST00000378387 NDUFA13Q9P0J0 144 aa11.08□□□□□ -0.63
ARHGEF39-201ENST00000378387 MYH7P12883 1935 aa11.08□□□□□ -0.63
ARHGEF39-201ENST00000378387 RPL5P46777 297 aaKnown RBP11.08□□□□□ -0.64
ARHGEF39-201ENST00000378387 PRAMEP78395 509 aa11.08□□□□□ -0.64
ARHGEF39-201ENST00000378387 FOLH1Q04609 750 aa11.08□□□□□ -0.64
ARHGEF39-201ENST00000378387 PPATQ06203 517 aa11.08□□□□□ -0.64
ARHGEF39-201ENST00000378387 TBL3Q12788 808 aaKnown RBP11.08□□□□□ -0.64
ARHGEF39-201ENST00000378387 OASLQ15646 514 aaKnown RBP11.08□□□□□ -0.64
ARHGEF39-201ENST00000378387 NCCRP1Q6ZVX7 275 aaPredicted RBP11.08□□□□□ -0.64
ARHGEF39-201ENST00000378387 KAT5Q92993 513 aa11.08□□□□□ -0.64
ARHGEF39-201ENST00000378387 SENP7Q9BQF6 1050 aa11.08□□□□□ -0.64
ARHGEF39-201ENST00000378387 LZTS2Q9BRK4 669 aa11.08□□□□□ -0.64
ARHGEF39-201ENST00000378387 SENP1Q9P0U3 644 aa11.08□□□□□ -0.64
ARHGEF39-201ENST00000378387 DYTNA2CJ06 578 aa11.08□□□□□ -0.64
ARHGEF39-201ENST00000378387 ZMPSTE24O75844 475 aa11.08□□□□□ -0.64
ARHGEF39-201ENST00000378387 SRGAP2CP0DJJ0 459 aa11.08□□□□□ -0.64
ARHGEF39-201ENST00000378387 SRGAP2BP0DMP2 458 aa11.08□□□□□ -0.64
ARHGEF39-201ENST00000378387 GYS1P13807 737 aa11.08□□□□□ -0.64
ARHGEF39-201ENST00000378387 TCN1P20061 433 aaPredicted RBP11.08□□□□□ -0.64
ARHGEF39-201ENST00000378387 MSX2P35548 267 aaPredicted RBP11.08□□□□□ -0.64
ARHGEF39-201ENST00000378387 EIF2B2P49770 351 aaKnown RBP11.08□□□□□ -0.64
ARHGEF39-201ENST00000378387 TFDP1Q14186 410 aa11.08□□□□□ -0.64
ARHGEF39-201ENST00000378387 EFTUD2Q15029 972 aaKnown RBP eCLIP11.08□□□□□ -0.643e-6■■■■■ 41.9
ARHGEF39-201ENST00000378387 DNAL1Q4LDG9 190 aa11.08□□□□□ -0.64
ARHGEF39-201ENST00000378387 CBWD6Q4V339 395 aa11.08□□□□□ -0.64
ARHGEF39-201ENST00000378387 SFT2D3Q587I9 215 aa11.08□□□□□ -0.64
ARHGEF39-201ENST00000378387 CBWD3Q5JTY5 395 aa11.08□□□□□ -0.64
ARHGEF39-201ENST00000378387 EFHC1Q5JVL4 640 aa11.08□□□□□ -0.64
ARHGEF39-201ENST00000378387 CBWD5Q5RIA9 395 aa11.08□□□□□ -0.64
ARHGEF39-201ENST00000378387 RNF148Q8N7C7 305 aa11.08□□□□□ -0.64
ARHGEF39-201ENST00000378387 VGLL2Q8N8G2 317 aa11.08□□□□□ -0.64
ARHGEF39-201ENST00000378387 PPP1R36Q96LQ0 422 aa11.08□□□□□ -0.64
ARHGEF39-201ENST00000378387 AAASQ9NRG9 546 aa11.08□□□□□ -0.64
ARHGEF39-201ENST00000378387 BARX2Q9UMQ3 279 aaPredicted RBP11.08□□□□□ -0.64
ARHGEF39-201ENST00000378387 EMSYQ7Z589 1322 aa11.08□□□□□ -0.64
ARHGEF39-201ENST00000378387 PDXKO00764 312 aa11.07□□□□□ -0.64
ARHGEF39-201ENST00000378387 ADCY6O43306 1168 aa11.07□□□□□ -0.64
ARHGEF39-201ENST00000378387 FOXD2O60548 495 aaPredicted RBP11.07□□□□□ -0.64
ARHGEF39-201ENST00000378387 PENKP01210 267 aaPredicted RBP11.07□□□□□ -0.64
ARHGEF39-201ENST00000378387 UQCRBP14927 111 aa11.07□□□□□ -0.64
ARHGEF39-201ENST00000378387 HIBADHP31937 336 aaKnown RBP11.07□□□□□ -0.64
ARHGEF39-201ENST00000378387 PHEXP78562 749 aa11.07□□□□□ -0.64
ARHGEF39-201ENST00000378387 MOGSQ13724 837 aa11.07□□□□□ -0.64
ARHGEF39-201ENST00000378387 C6orf183Q5T699 404 aa11.07□□□□□ -0.64
ARHGEF39-201ENST00000378387 MAP3K21Q5TCX8 1036 aa11.07□□□□□ -0.64
ARHGEF39-201ENST00000378387 KLHDC10Q6PID8 442 aa11.07□□□□□ -0.64
ARHGEF39-201ENST00000378387 CCDC80Q76M96 950 aa11.07□□□□□ -0.64
ARHGEF39-201ENST00000378387 NUDCD3Q8IVD9 361 aa11.07□□□□□ -0.64
ARHGEF39-201ENST00000378387 PPM1NQ8N819 430 aa11.07□□□□□ -0.64
ARHGEF39-201ENST00000378387 FBXO27Q8NI29 283 aa11.07□□□□□ -0.64
ARHGEF39-201ENST00000378387 TCEAL9Q9UHQ7 104 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms