RNA–Protein interactions for RNA: ENST00000378156.8

NPHP4-201, Transcript of nephrocystin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP4, Length 4,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-201ENST00000378156 BTBD6Q96KE9 485 aa15.78■□□□□ 0.12
NPHP4-201ENST00000378156 CBWD1Q9BRT8 395 aa15.78■□□□□ 0.12
NPHP4-201ENST00000378156 ECT2Q9H8V3 914 aa15.78■□□□□ 0.12
NPHP4-201ENST00000378156 RASSF10A6NK89 507 aa15.78■□□□□ 0.12
NPHP4-201ENST00000378156 ITIH2P19823 946 aa15.78■□□□□ 0.12
NPHP4-201ENST00000378156 MEA1Q16626 185 aa15.78■□□□□ 0.12
NPHP4-201ENST00000378156 P3H1Q32P28 736 aa15.78■□□□□ 0.12
NPHP4-201ENST00000378156 FSCBQ5H9T9 825 aa15.78■□□□□ 0.12
NPHP4-201ENST00000378156 TEDDM1Q5T9Z0 273 aa15.78■□□□□ 0.12
NPHP4-201ENST00000378156 GLIS3Q8NEA6 775 aa15.78■□□□□ 0.12
NPHP4-201ENST00000378156 SEC16BQ96JE7 1060 aa15.78■□□□□ 0.12
NPHP4-201ENST00000378156 VPS11Q9H270 941 aa15.78■□□□□ 0.12
NPHP4-201ENST00000378156 F5H423 210 aaPredicted RBP15.78■□□□□ 0.12
NPHP4-201ENST00000378156 MEI1Q5TIA1 1274 aa15.78■□□□□ 0.12
NPHP4-201ENST00000378156 RNF219Q5W0B1 726 aaPredicted RBP15.78■□□□□ 0.12
NPHP4-201ENST00000378156 ELMOD1Q8N336 334 aa15.78■□□□□ 0.12
NPHP4-201ENST00000378156 MCEEQ96PE7 176 aa15.78■□□□□ 0.12
NPHP4-201ENST00000378156 EPAS1Q99814 870 aa15.78■□□□□ 0.12
NPHP4-201ENST00000378156 MROH8Q9H579 483 aa15.78■□□□□ 0.12
NPHP4-201ENST00000378156 WNT10BO00744 389 aa15.78■□□□□ 0.12
NPHP4-201ENST00000378156 HSD17B4P51659 736 aa15.78■□□□□ 0.12
NPHP4-201ENST00000378156 STAT4Q14765 748 aa15.78■□□□□ 0.12
NPHP4-201ENST00000378156 TRMT10CQ7L0Y3 403 aaKnown RBP15.78■□□□□ 0.12
NPHP4-201ENST00000378156 SCG3Q8WXD2 468 aaKnown RBP15.78■□□□□ 0.12
NPHP4-201ENST00000378156 CYTH2Q99418 400 aa15.78■□□□□ 0.12
NPHP4-201ENST00000378156 TLR10Q9BXR5 811 aa15.78■□□□□ 0.12
NPHP4-201ENST00000378156 KIAA1683Q9H0B3 1180 aa15.78■□□□□ 0.12
NPHP4-201ENST00000378156 ZFP69BQ9UJL9 534 aa15.78■□□□□ 0.12
NPHP4-201ENST00000378156 F8W8V4 182 aa15.77■□□□□ 0.12
NPHP4-201ENST00000378156 SUPT20HL2P0C7V6 817 aa15.77■□□□□ 0.12
NPHP4-201ENST00000378156 IL1RL1Q01638 556 aa15.77■□□□□ 0.12
NPHP4-201ENST00000378156 PCNX4Q63HM2 1172 aa15.77■□□□□ 0.12
NPHP4-201ENST00000378156 ZNF677Q86XU0 584 aa15.77■□□□□ 0.12
NPHP4-201ENST00000378156 MON2Q7Z3U7 1717 aa15.77■□□□□ 0.12
NPHP4-201ENST00000378156 KLRC4O43908 158 aa15.77■□□□□ 0.12
NPHP4-201ENST00000378156 HAUS5O94927 633 aa15.77■□□□□ 0.12
NPHP4-201ENST00000378156 HSPA4LO95757 839 aa15.77■□□□□ 0.12
NPHP4-201ENST00000378156 VEPH1Q14D04 833 aa15.77■□□□□ 0.12
NPHP4-201ENST00000378156 TRIM67Q6ZTA4 783 aa15.77■□□□□ 0.12
NPHP4-201ENST00000378156 CBWD2Q8IUF1 395 aa15.77■□□□□ 0.12
NPHP4-201ENST00000378156 SPATA2LQ8IUW3 424 aaPredicted RBP15.77■□□□□ 0.12
NPHP4-201ENST00000378156 GFM2Q969S9 779 aaKnown RBP15.77■□□□□ 0.12
NPHP4-201ENST00000378156 MED15Q96RN5 788 aa15.77■□□□□ 0.12
NPHP4-201ENST00000378156 OSBPL8Q9BZF1 889 aa15.77■□□□□ 0.12
NPHP4-201ENST00000378156 ALG13Q9NP73 1137 aaKnown RBP15.77■□□□□ 0.12
NPHP4-201ENST00000378156 SLC38A7Q9NVC3 462 aa15.77■□□□□ 0.12
NPHP4-201ENST00000378156 LMCD1Q9NZU5 365 aa15.77■□□□□ 0.12
NPHP4-201ENST00000378156 PPP2R3BQ9Y5P8 575 aa15.77■□□□□ 0.12
NPHP4-201ENST00000378156 SGPL1O95470 568 aa15.77■□□□□ 0.11
NPHP4-201ENST00000378156 FAM107AO95990 144 aa15.77■□□□□ 0.11
NPHP4-201ENST00000378156 ITGA4P13612 1032 aa15.77■□□□□ 0.11
NPHP4-201ENST00000378156 TAC1P20366 129 aa15.77■□□□□ 0.11
NPHP4-201ENST00000378156 NPTX2P47972 431 aa15.77■□□□□ 0.11
NPHP4-201ENST00000378156 SLC12A1Q13621 1099 aa15.77■□□□□ 0.11
NPHP4-201ENST00000378156 SYCP2LQ5T4T6 812 aa15.77■□□□□ 0.11
NPHP4-201ENST00000378156 VIRMAQ69YN4 1812 aaKnown RBP15.77■□□□□ 0.11
NPHP4-201ENST00000378156 PPP1R12AO14974 1030 aaPredicted RBP15.77■□□□□ 0.11
NPHP4-201ENST00000378156 OGTO15294 1046 aa15.77■□□□□ 0.11
NPHP4-201ENST00000378156 CDH16O75309 829 aa15.77■□□□□ 0.11
NPHP4-201ENST00000378156 RALAP11233 206 aa15.77■□□□□ 0.11
NPHP4-201ENST00000378156 CORO7P57737 925 aa15.77■□□□□ 0.11
NPHP4-201ENST00000378156 TMEM119Q4V9L6 283 aa15.77■□□□□ 0.11
NPHP4-201ENST00000378156 GPAT2Q6NUI2 795 aa15.77■□□□□ 0.11
NPHP4-201ENST00000378156 PARD3BQ8TEW8 1205 aa15.77■□□□□ 0.11
NPHP4-201ENST00000378156 GOLGA8RI6L899 631 aa15.76■□□□□ 0.11
NPHP4-201ENST00000378156 CFLARO15519 480 aa15.76■□□□□ 0.11
NPHP4-201ENST00000378156 PGK2P07205 417 aa15.76■□□□□ 0.11
NPHP4-201ENST00000378156 MTM1Q13496 603 aa15.76■□□□□ 0.11
NPHP4-201ENST00000378156 SMAD1Q15797 465 aaKnown RBP15.76■□□□□ 0.11
NPHP4-201ENST00000378156 HIF1AQ16665 826 aa15.76■□□□□ 0.11
NPHP4-201ENST00000378156 C2CD6Q53TS8 623 aa15.76■□□□□ 0.11
NPHP4-201ENST00000378156 NOTUMQ6P988 496 aa15.76■□□□□ 0.11
NPHP4-201ENST00000378156 SPATA21Q7Z572 469 aa15.76■□□□□ 0.11
NPHP4-201ENST00000378156 SP110Q9HB58 689 aa15.76■□□□□ 0.11
NPHP4-201ENST00000378156 FAM49BQ9NUQ9 324 aa15.76■□□□□ 0.11
NPHP4-201ENST00000378156 APOBEC2Q9Y235 224 aaKnown RBP15.76■□□□□ 0.11
NPHP4-201ENST00000378156 GRIK1P39086 918 aa15.76■□□□□ 0.11
NPHP4-201ENST00000378156 AP2B1P63010 937 aa15.76■□□□□ 0.11
NPHP4-201ENST00000378156 MAPK7Q13164 816 aa15.76■□□□□ 0.11
NPHP4-201ENST00000378156 SYDE1Q6ZW31 735 aaPredicted RBP15.76■□□□□ 0.11
NPHP4-201ENST00000378156 KCNV2Q8TDN2 545 aa15.76■□□□□ 0.11
NPHP4-201ENST00000378156 HPDLQ96IR7 371 aa15.76■□□□□ 0.11
NPHP4-201ENST00000378156 ZSWIM1Q9BR11 485 aa15.76■□□□□ 0.11
NPHP4-201ENST00000378156 TRABDQ9H4I3 376 aa15.76■□□□□ 0.11
NPHP4-201ENST00000378156 PXMP2Q9NR77 195 aa15.76■□□□□ 0.11
NPHP4-201ENST00000378156 KRT82Q9NSB4 513 aa15.76■□□□□ 0.11
NPHP4-201ENST00000378156 F8VZ95 297 aa15.76■□□□□ 0.11
NPHP4-201ENST00000378156 TADA2AO75478 443 aa15.76■□□□□ 0.11
NPHP4-201ENST00000378156 CHEK2O96017 543 aa15.76■□□□□ 0.11
NPHP4-201ENST00000378156 GTF2H1P32780 548 aa15.76■□□□□ 0.11
NPHP4-201ENST00000378156 EPHX2P34913 555 aa15.76■□□□□ 0.11
NPHP4-201ENST00000378156 COILP38432 576 aaPredicted RBP15.76■□□□□ 0.11
NPHP4-201ENST00000378156 GCLCP48506 637 aaPredicted RBP15.76■□□□□ 0.11
NPHP4-201ENST00000378156 IRX1P78414 480 aaPredicted RBP15.76■□□□□ 0.11
NPHP4-201ENST00000378156 ANO5Q75V66 913 aa15.76■□□□□ 0.11
NPHP4-201ENST00000378156 ZNF720Q7Z2F6 126 aa15.76■□□□□ 0.11
NPHP4-201ENST00000378156 SLC13A5Q86YT5 568 aaPredicted RBP15.76■□□□□ 0.11
NPHP4-201ENST00000378156 ZNF507Q8TCN5 953 aa15.76■□□□□ 0.11
NPHP4-201ENST00000378156 GIPC2Q8TF65 315 aa15.76■□□□□ 0.11
NPHP4-201ENST00000378156 EXT2Q93063 718 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms