RNA–Protein interactions for RNA: ENST00000377861.4

PCDH9-201, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 28,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-201ENST00000377861 SNHG28P0DPA3 235 aa5.18□□□□□ -1.58
PCDH9-201ENST00000377861 LRRC34Q8IZ02 419 aa5.18□□□□□ -1.58
PCDH9-201ENST00000377861 KAT2BQ92831 832 aa5.18□□□□□ -1.58
PCDH9-201ENST00000377861 HSFY1Q96LI6 401 aa5.18□□□□□ -1.58
PCDH9-201ENST00000377861 RPL5P46777 297 aaKnown RBP5.18□□□□□ -1.58
PCDH9-201ENST00000377861 TTC8Q8TAM2 541 aa5.18□□□□□ -1.58
PCDH9-201ENST00000377861 SYTL2Q9HCH5 934 aa5.18□□□□□ -1.58
PCDH9-201ENST00000377861 CD209Q9NNX6 404 aa5.18□□□□□ -1.58
PCDH9-201ENST00000377861 PSMC1P62191 440 aaKnown RBP5.17□□□□□ -1.58
PCDH9-201ENST00000377861 PIWIL4Q7Z3Z4 852 aaKnown RBP5.17□□□□□ -1.58
PCDH9-201ENST00000377861 NET1Q7Z628 596 aaPredicted RBP5.17□□□□□ -1.58
PCDH9-201ENST00000377861 PDPRQ8NCN5 879 aa5.17□□□□□ -1.58
PCDH9-201ENST00000377861 TRIM45Q9H8W5 580 aaPredicted RBP5.17□□□□□ -1.58
PCDH9-201ENST00000377861 GPHNQ9NQX3 736 aaPredicted RBP5.17□□□□□ -1.58
PCDH9-201ENST00000377861 CNOT11Q9UKZ1 510 aaKnown RBP5.17□□□□□ -1.58
PCDH9-201ENST00000377861 M0QZ92 97 aa5.17□□□□□ -1.58
PCDH9-201ENST00000377861 FAM189A1O60320 539 aa5.17□□□□□ -1.58
PCDH9-201ENST00000377861 DYMQ7RTS9 669 aa5.17□□□□□ -1.58
PCDH9-201ENST00000377861 JAMLQ86YT9 394 aa5.17□□□□□ -1.58
PCDH9-201ENST00000377861 LARP6Q9BRS8 491 aaKnown RBP5.17□□□□□ -1.58
PCDH9-201ENST00000377861 ZNF335Q9H4Z2 1342 aaPredicted RBP5.17□□□□□ -1.58
PCDH9-201ENST00000377861 USP17L10C9JJH3 530 aa5.17□□□□□ -1.58
PCDH9-201ENST00000377861 CYTH3O43739 400 aa5.17□□□□□ -1.58
PCDH9-201ENST00000377861 HSD17B3P37058 310 aa5.17□□□□□ -1.58
PCDH9-201ENST00000377861 SNRNP35Q16560 246 aaKnown RBP5.17□□□□□ -1.58
PCDH9-201ENST00000377861 SMARCAD1Q9H4L7 1026 aa5.17□□□□□ -1.58
PCDH9-201ENST00000377861 SIK3Q9Y2K2 1263 aa5.17□□□□□ -1.58
PCDH9-201ENST00000377861 WDR46O15213 610 aaKnown RBP5.17□□□□□ -1.58
PCDH9-201ENST00000377861 MGRN1O60291 552 aa5.17□□□□□ -1.58
PCDH9-201ENST00000377861 ARFIP2P53365 341 aa5.17□□□□□ -1.58
PCDH9-201ENST00000377861 STRADAQ7RTN6 431 aa5.17□□□□□ -1.58
PCDH9-201ENST00000377861 PDCD6IPQ8WUM4 868 aaKnown RBP5.17□□□□□ -1.58
PCDH9-201ENST00000377861 CCDC177Q9NQR7 707 aaPredicted RBP5.17□□□□□ -1.58
PCDH9-201ENST00000377861 PTPRMP28827 1452 aa5.17□□□□□ -1.58
PCDH9-201ENST00000377861 SAGE2PA6NJ88 616 aa5.17□□□□□ -1.58
PCDH9-201ENST00000377861 PACRGLQ8N7B6 248 aa5.17□□□□□ -1.58
PCDH9-201ENST00000377861 ZNF653Q96CK0 615 aa5.17□□□□□ -1.58
PCDH9-201ENST00000377861 KAZALD1Q96I82 304 aa5.17□□□□□ -1.58
PCDH9-201ENST00000377861 TEX13BQ9BXU2 312 aa5.17□□□□□ -1.58
PCDH9-201ENST00000377861 CHCHD3Q9NX63 227 aaKnown RBP5.17□□□□□ -1.58
PCDH9-201ENST00000377861 ATRNO75882 1429 aa5.17□□□□□ -1.58
PCDH9-201ENST00000377861 AHCYL1O43865 530 aa5.17□□□□□ -1.58
PCDH9-201ENST00000377861 PDK4Q16654 411 aa5.17□□□□□ -1.58
PCDH9-201ENST00000377861 TMC3Q7Z5M5 1100 aa5.17□□□□□ -1.58
PCDH9-201ENST00000377861 TCEANC2Q96MN5 208 aa5.17□□□□□ -1.58
PCDH9-201ENST00000377861 TBC1D23Q9NUY8 699 aa5.17□□□□□ -1.58
PCDH9-201ENST00000377861 PHF11Q9UIL8 331 aa5.17□□□□□ -1.58
PCDH9-201ENST00000377861 NTRK1P04629 796 aa5.17□□□□□ -1.58
PCDH9-201ENST00000377861 XKR9Q5GH70 373 aa5.17□□□□□ -1.58
PCDH9-201ENST00000377861 C18orf25Q96B23 403 aaPredicted RBP5.17□□□□□ -1.58
PCDH9-201ENST00000377861 TUBA4AP68366 448 aa5.17□□□□□ -1.58
PCDH9-201ENST00000377861 SKIDA1Q1XH10 827 aa5.17□□□□□ -1.58
PCDH9-201ENST00000377861 RIC8BQ9NVN3 520 aa5.17□□□□□ -1.58
PCDH9-201ENST00000377861 SAMD4BQ5PRF9 694 aaKnown RBP5.17□□□□□ -1.58
PCDH9-201ENST00000377861 DUPD1Q68J44 220 aa5.17□□□□□ -1.58
PCDH9-201ENST00000377861 DPY19L2Q6NUT2 758 aa5.17□□□□□ -1.58
PCDH9-201ENST00000377861 TRIML2Q8N7C3 387 aa5.17□□□□□ -1.58
PCDH9-201ENST00000377861 CLMNQ96JQ2 1002 aa5.17□□□□□ -1.58
PCDH9-201ENST00000377861 ELAC2Q9BQ52 826 aaKnown RBP5.17□□□□□ -1.58
PCDH9-201ENST00000377861 SYCE1LA8MT33 242 aa5.17□□□□□ -1.58
PCDH9-201ENST00000377861 SNAP91O60641 907 aa5.17□□□□□ -1.58
PCDH9-201ENST00000377861 MAD2L1Q13257 205 aaPredicted RBP5.17□□□□□ -1.58
PCDH9-201ENST00000377861 GRTP1Q5TC63 336 aa5.17□□□□□ -1.58
PCDH9-201ENST00000377861 TRMT44Q8IYL2 757 aaKnown RBP5.17□□□□□ -1.58
PCDH9-201ENST00000377861 MMS19Q96T76 1030 aa5.17□□□□□ -1.58
PCDH9-201ENST00000377861 ENC1O14682 589 aa5.17□□□□□ -1.58
PCDH9-201ENST00000377861 CFBP00751 764 aa5.17□□□□□ -1.58
PCDH9-201ENST00000377861 ZNF33BQ06732 778 aa5.17□□□□□ -1.58
PCDH9-201ENST00000377861 PKN2Q16513 984 aaKnown RBP5.17□□□□□ -1.58
PCDH9-201ENST00000377861 SCARA3Q6AZY7 606 aa5.17□□□□□ -1.58
PCDH9-201ENST00000377861 CERKQ8TCT0 537 aa5.17□□□□□ -1.58
PCDH9-201ENST00000377861 USP17L5A8MUK1 530 aa5.17□□□□□ -1.58
PCDH9-201ENST00000377861 TGM2P21980 687 aa5.17□□□□□ -1.58
PCDH9-201ENST00000377861 WDR49Q8IV35 697 aa5.17□□□□□ -1.58
PCDH9-201ENST00000377861 NELFCDQ8IXH7 590 aa5.17□□□□□ -1.58
PCDH9-201ENST00000377861 DPP7Q9UHL4 492 aa5.17□□□□□ -1.58
PCDH9-201ENST00000377861 RABGEF1Q9UJ41 708 aa5.17□□□□□ -1.58
PCDH9-201ENST00000377861 TRPC5Q9UL62 973 aaPredicted RBP5.17□□□□□ -1.58
PCDH9-201ENST00000377861 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.17□□□□□ -1.58
PCDH9-201ENST00000377861 UMPSP11172 480 aa5.17□□□□□ -1.58
PCDH9-201ENST00000377861 POLD1P28340 1107 aa5.17□□□□□ -1.58
PCDH9-201ENST00000377861 CTDSPL2Q05D32 466 aa5.17□□□□□ -1.58
PCDH9-201ENST00000377861 CNGA3Q16281 694 aa5.17□□□□□ -1.58
PCDH9-201ENST00000377861 ILDR2Q71H61 639 aa5.17□□□□□ -1.58
PCDH9-201ENST00000377861 LCORLQ8N3X6 602 aa5.17□□□□□ -1.58
PCDH9-201ENST00000377861 ADCY4Q8NFM4 1077 aa5.17□□□□□ -1.58
PCDH9-201ENST00000377861 MCCC1Q96RQ3 725 aaPredicted RBP5.17□□□□□ -1.58
PCDH9-201ENST00000377861 TSSK1BQ9BXA7 367 aa5.17□□□□□ -1.58
PCDH9-201ENST00000377861 DDX47Q9H0S4 455 aaKnown RBP5.17□□□□□ -1.58
PCDH9-201ENST00000377861 STX18Q9P2W9 335 aaKnown RBP5.17□□□□□ -1.58
PCDH9-201ENST00000377861 ICAM1P05362 532 aa5.17□□□□□ -1.58
PCDH9-201ENST00000377861 TOB1P50616 345 aaPredicted RBP5.17□□□□□ -1.58
PCDH9-201ENST00000377861 STK4Q13043 487 aa5.17□□□□□ -1.58
PCDH9-201ENST00000377861 ART4Q93070 314 aa5.17□□□□□ -1.58
PCDH9-201ENST00000377861 PTCD3Q96EY7 689 aaKnown RBP5.17□□□□□ -1.58
PCDH9-201ENST00000377861 PAWRQ96IZ0 340 aaKnown RBP5.17□□□□□ -1.58
PCDH9-201ENST00000377861 BTDP43251 543 aa5.17□□□□□ -1.58
PCDH9-201ENST00000377861 CHST3Q7LGC8 479 aa5.17□□□□□ -1.58
PCDH9-201ENST00000377861 BCL7BQ9BQE9 202 aa5.17□□□□□ -1.58
PCDH9-201ENST00000377861 CACYBPQ9HB71 228 aaKnown RBP5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms