RNA–Protein interactions for RNA: ENST00000377808.8

SMARCE1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,307 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-203ENST00000377808 ZNF507Q8TCN5 953 aa12.49□□□□□ -0.41
SMARCE1-203ENST00000377808 RSAD2Q8WXG1 361 aa12.49□□□□□ -0.41
SMARCE1-203ENST00000377808 ING5Q8WYH8 240 aa12.49□□□□□ -0.41
SMARCE1-203ENST00000377808 CCDC47Q96A33 483 aaKnown RBP12.49□□□□□ -0.41
SMARCE1-203ENST00000377808 ANKRD36BP1Q96IX9 119 aa12.49□□□□□ -0.41
SMARCE1-203ENST00000377808 MFSD14AQ96MC6 490 aa12.49□□□□□ -0.41
SMARCE1-203ENST00000377808 CORO1BQ9BR76 489 aa12.49□□□□□ -0.41
SMARCE1-203ENST00000377808 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.49□□□□□ -0.41
SMARCE1-203ENST00000377808 DNMT3BQ9UBC3 853 aaKnown RBP12.49□□□□□ -0.41
SMARCE1-203ENST00000377808 AFF4Q9UHB7 1163 aaKnown RBP12.49□□□□□ -0.41
SMARCE1-203ENST00000377808 FBXL21Q9UKT6 434 aa12.49□□□□□ -0.41
SMARCE1-203ENST00000377808 DSEQ9UL01 958 aa12.49□□□□□ -0.41
SMARCE1-203ENST00000377808 HPSEQ9Y251 543 aa12.49□□□□□ -0.41
SMARCE1-203ENST00000377808 MRPS23Q9Y3D9 190 aaKnown RBP12.49□□□□□ -0.41
SMARCE1-203ENST00000377808 INSL5Q9Y5Q6 135 aa12.49□□□□□ -0.41
SMARCE1-203ENST00000377808 KPNA7A9QM74 516 aa12.48□□□□□ -0.41
SMARCE1-203ENST00000377808 OAZ2O95190 189 aa12.48□□□□□ -0.41
SMARCE1-203ENST00000377808 TNNC2P02585 160 aa12.48□□□□□ -0.41
SMARCE1-203ENST00000377808 RHOP08100 348 aa12.48□□□□□ -0.41
SMARCE1-203ENST00000377808 DLATP10515 647 aaKnown RBP12.48□□□□□ -0.41
SMARCE1-203ENST00000377808 PAX3P23760 479 aa12.48□□□□□ -0.41
SMARCE1-203ENST00000377808 HOXD13P35453 343 aa12.48□□□□□ -0.41
SMARCE1-203ENST00000377808 PNPLA4P41247 253 aa12.48□□□□□ -0.41
SMARCE1-203ENST00000377808 EHHADHQ08426 723 aa12.48□□□□□ -0.41
SMARCE1-203ENST00000377808 TDGQ13569 410 aa12.48□□□□□ -0.41
SMARCE1-203ENST00000377808 IQCEQ6IPM2 695 aa12.48□□□□□ -0.41
SMARCE1-203ENST00000377808 TCEAL8Q8IYN2 117 aa12.48□□□□□ -0.41
SMARCE1-203ENST00000377808 THEM5Q8N1Q8 247 aa12.48□□□□□ -0.41
SMARCE1-203ENST00000377808 C1orf127Q8N9H9 656 aa12.48□□□□□ -0.41
SMARCE1-203ENST00000377808 CCDC127Q96BQ5 260 aa12.48□□□□□ -0.41
SMARCE1-203ENST00000377808 FNBP1Q96RU3 617 aa12.48□□□□□ -0.41
SMARCE1-203ENST00000377808 TMEM209Q96SK2 561 aa12.48□□□□□ -0.41
SMARCE1-203ENST00000377808 OXCT2Q9BYC2 517 aaPredicted RBP12.48□□□□□ -0.41
SMARCE1-203ENST00000377808 MFSD1Q9H3U5 465 aa12.48□□□□□ -0.41
SMARCE1-203ENST00000377808 GOLPH3LQ9H4A5 285 aa12.48□□□□□ -0.41
SMARCE1-203ENST00000377808 IGSF9Q9P2J2 1179 aa12.48□□□□□ -0.41
SMARCE1-203ENST00000377808 EPS15L1Q9UBC2 864 aa12.48□□□□□ -0.41
SMARCE1-203ENST00000377808 ITGA11Q9UKX5 1188 aa12.48□□□□□ -0.41
SMARCE1-203ENST00000377808 A0A1W2PQ27 194 aa12.47□□□□□ -0.41
SMARCE1-203ENST00000377808 A0A1W2PQ64 194 aa12.47□□□□□ -0.41
SMARCE1-203ENST00000377808 A0A1W2PQD8 194 aa12.47□□□□□ -0.41
SMARCE1-203ENST00000377808 TGFB1I1O43294 461 aa12.47□□□□□ -0.41
SMARCE1-203ENST00000377808 KLRC4O43908 158 aa12.47□□□□□ -0.41
SMARCE1-203ENST00000377808 EXOC3O60645 756 aa12.47□□□□□ -0.41
SMARCE1-203ENST00000377808 RPN1P04843 607 aaKnown RBP12.47□□□□□ -0.41
SMARCE1-203ENST00000377808 PRR29P0C7W0 189 aa12.47□□□□□ -0.41
SMARCE1-203ENST00000377808 LAMP2P13473 410 aa12.47□□□□□ -0.41
SMARCE1-203ENST00000377808 PTPN2P17706 415 aa12.47□□□□□ -0.41
SMARCE1-203ENST00000377808 TNNI1P19237 187 aa12.47□□□□□ -0.41
SMARCE1-203ENST00000377808 RBP5P82980 135 aa12.47□□□□□ -0.41
SMARCE1-203ENST00000377808 STK4Q13043 487 aa12.47□□□□□ -0.41
SMARCE1-203ENST00000377808 MYBPC2Q14324 1141 aa12.47□□□□□ -0.41
SMARCE1-203ENST00000377808 SURF1Q15526 300 aa12.47□□□□□ -0.41
SMARCE1-203ENST00000377808 SNRNP35Q16560 246 aaKnown RBP12.47□□□□□ -0.41
SMARCE1-203ENST00000377808 KNOP1Q1ED39 458 aaKnown RBP12.47□□□□□ -0.41
SMARCE1-203ENST00000377808 SLC39A12Q504Y0 691 aa12.47□□□□□ -0.41
SMARCE1-203ENST00000377808 WSCD1Q658N2 575 aa12.47□□□□□ -0.41
SMARCE1-203ENST00000377808 PDZD4Q76G19 769 aaPredicted RBP12.47□□□□□ -0.41
SMARCE1-203ENST00000377808 RTL10Q7L3V2 364 aa12.47□□□□□ -0.41
SMARCE1-203ENST00000377808 XXYLT1Q8NBI6 393 aa12.47□□□□□ -0.41
SMARCE1-203ENST00000377808 OR10T2Q8NGX3 314 aa12.47□□□□□ -0.41
SMARCE1-203ENST00000377808 FGF13Q92913 245 aa12.47□□□□□ -0.41
SMARCE1-203ENST00000377808 CCDC34Q96HJ3 373 aa12.47□□□□□ -0.41
SMARCE1-203ENST00000377808 ZNF512Q96ME7 567 aaPredicted RBP12.47□□□□□ -0.41
SMARCE1-203ENST00000377808 SEPT5Q99719 369 aaPredicted RBP12.47□□□□□ -0.41
SMARCE1-203ENST00000377808 KIAA1586Q9HCI6 787 aa12.47□□□□□ -0.41
SMARCE1-203ENST00000377808 CDH7Q9ULB5 785 aa12.47□□□□□ -0.41
SMARCE1-203ENST00000377808 SLC27A5Q9Y2P5 690 aa12.47□□□□□ -0.41
SMARCE1-203ENST00000377808 YIPF1Q9Y548 306 aa12.47□□□□□ -0.41
SMARCE1-203ENST00000377808 NUMBLQ9Y6R0 609 aa12.47□□□□□ -0.41
SMARCE1-203ENST00000377808 TCHHQ07283 1943 aa12.47□□□□□ -0.41
SMARCE1-203ENST00000377808 SCN1AP35498 2009 aa12.46□□□□□ -0.41
SMARCE1-203ENST00000377808 MTMR11A4FU01 709 aa12.46□□□□□ -0.41
SMARCE1-203ENST00000377808 NARSO43776 548 aaKnown RBP12.46□□□□□ -0.41
SMARCE1-203ENST00000377808 HUS1O60921 280 aa12.46□□□□□ -0.41
SMARCE1-203ENST00000377808 PAPLNO95428 1278 aa12.46□□□□□ -0.41
SMARCE1-203ENST00000377808 PDGFBP01127 241 aaPredicted RBP12.46□□□□□ -0.41
SMARCE1-203ENST00000377808 MYL1P05976 194 aa12.46□□□□□ -0.41
SMARCE1-203ENST00000377808 CFHP08603 1231 aa12.46□□□□□ -0.41
SMARCE1-203ENST00000377808 POU2F2P09086 479 aa12.46□□□□□ -0.41
SMARCE1-203ENST00000377808 MYL4P12829 197 aa12.46□□□□□ -0.41
SMARCE1-203ENST00000377808 RFX1P22670 979 aa12.46□□□□□ -0.41
SMARCE1-203ENST00000377808 ALDH1A3P47895 512 aa12.46□□□□□ -0.41
SMARCE1-203ENST00000377808 MYO1EQ12965 1108 aa12.46□□□□□ -0.41
SMARCE1-203ENST00000377808 DUSP4Q13115 394 aa12.46□□□□□ -0.41
SMARCE1-203ENST00000377808 PLD1Q13393 1074 aa12.46□□□□□ -0.41
SMARCE1-203ENST00000377808 DUOXA2Q1HG44 320 aa12.46□□□□□ -0.41
SMARCE1-203ENST00000377808 BMT2Q1RMZ1 405 aa12.46□□□□□ -0.41
SMARCE1-203ENST00000377808 CYP4A22Q5TCH4 519 aa12.46□□□□□ -0.41
SMARCE1-203ENST00000377808 KRBA2Q6ZNG9 492 aa12.46□□□□□ -0.41
SMARCE1-203ENST00000377808 ATAD1Q8NBU5 361 aa12.46□□□□□ -0.41
SMARCE1-203ENST00000377808 KIAA0895Q8NCT3 520 aa12.46□□□□□ -0.41
SMARCE1-203ENST00000377808 OR5B17Q8NGF7 314 aa12.46□□□□□ -0.41
SMARCE1-203ENST00000377808 FAM200AQ8TCP9 573 aa12.46□□□□□ -0.41
SMARCE1-203ENST00000377808 ASIC4Q96FT7 647 aa12.46□□□□□ -0.41
SMARCE1-203ENST00000377808 ASAH2Q9NR71 780 aa12.46□□□□□ -0.41
SMARCE1-203ENST00000377808 INTS13Q9NVM9 706 aa12.46□□□□□ -0.41
SMARCE1-203ENST00000377808 DUSP12Q9UNI6 340 aa12.46□□□□□ -0.41
SMARCE1-203ENST00000377808 SNX9Q9Y5X1 595 aa12.46□□□□□ -0.41
SMARCE1-203ENST00000377808 TECTAO75443 2155 aa12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms