RNA–Protein interactions for RNA: ENST00000377575.2

HMGN4-201, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN4, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-201ENST00000377575 TMEM191BP0C7N4 346 aa18.16■□□□□ 0.5
HMGN4-201ENST00000377575 LAMP2P13473 410 aa18.16■□□□□ 0.5
HMGN4-201ENST00000377575 HOXD13P35453 343 aa18.16■□□□□ 0.5
HMGN4-201ENST00000377575 SYKP43405 635 aa18.16■□□□□ 0.5
HMGN4-201ENST00000377575 NTHL1P78549 312 aa18.16■□□□□ 0.5
HMGN4-201ENST00000377575 SURF1Q15526 300 aa18.16■□□□□ 0.5
HMGN4-201ENST00000377575 BMT2Q1RMZ1 405 aa18.16■□□□□ 0.5
HMGN4-201ENST00000377575 NELFCDQ8IXH7 590 aa18.16■□□□□ 0.5
HMGN4-201ENST00000377575 SCFD1Q8WVM8 642 aa18.16■□□□□ 0.5
HMGN4-201ENST00000377575 CHAMP1Q96JM3 812 aa18.16■□□□□ 0.5
HMGN4-201ENST00000377575 SLC39A2Q9NP94 309 aa18.16■□□□□ 0.5
HMGN4-201ENST00000377575 AGPAT3Q9NRZ7 376 aa18.16■□□□□ 0.5
HMGN4-201ENST00000377575 HCFC1R1Q9NWW0 138 aa18.16■□□□□ 0.5
HMGN4-201ENST00000377575 CGNQ9P2M7 1197 aaKnown RBP18.16■□□□□ 0.5
HMGN4-201ENST00000377575 DNMT3BQ9UBC3 853 aaKnown RBP18.16■□□□□ 0.5
HMGN4-201ENST00000377575 CDH7Q9ULB5 785 aa18.16■□□□□ 0.5
HMGN4-201ENST00000377575 A0A1W2PQ27 194 aa18.15■□□□□ 0.5
HMGN4-201ENST00000377575 A0A1W2PQ64 194 aa18.15■□□□□ 0.5
HMGN4-201ENST00000377575 A0A1W2PQD8 194 aa18.15■□□□□ 0.5
HMGN4-201ENST00000377575 CYB561D2O14569 222 aa18.15■□□□□ 0.5
HMGN4-201ENST00000377575 SEC24AO95486 1093 aa18.15■□□□□ 0.5
HMGN4-201ENST00000377575 ITGB3P05106 788 aa18.15■□□□□ 0.5
HMGN4-201ENST00000377575 RHOP08100 348 aa18.15■□□□□ 0.5
HMGN4-201ENST00000377575 POLR2BP30876 1174 aaKnown RBP18.15■□□□□ 0.5
HMGN4-201ENST00000377575 WNT7BP56706 349 aa18.15■□□□□ 0.5
HMGN4-201ENST00000377575 NUCB2P80303 420 aa18.15■□□□□ 0.5
HMGN4-201ENST00000377575 PLD1Q13393 1074 aa18.15■□□□□ 0.5
HMGN4-201ENST00000377575 RNF19BQ6ZMZ0 732 aa18.15■□□□□ 0.5
HMGN4-201ENST00000377575 FBXL6Q8N531 539 aa18.15■□□□□ 0.5
HMGN4-201ENST00000377575 ANKRD36BP1Q96IX9 119 aa18.15■□□□□ 0.5
HMGN4-201ENST00000377575 MTMR12Q9C0I1 747 aa18.15■□□□□ 0.5
HMGN4-201ENST00000377575 SMOC2Q9H3U7 446 aa18.15■□□□□ 0.5
HMGN4-201ENST00000377575 PDE11AQ9HCR9 933 aa18.15■□□□□ 0.5
HMGN4-201ENST00000377575 AVENQ9NQS1 362 aaPredicted RBP18.15■□□□□ 0.5
HMGN4-201ENST00000377575 R3HCC1Q9Y3T6 440 aaKnown RBP18.15■□□□□ 0.5
HMGN4-201ENST00000377575 FAM237AA0A1B0GTK4 181 aa18.14■□□□□ 0.49
HMGN4-201ENST00000377575 KPNA7A9QM74 516 aa18.14■□□□□ 0.49
HMGN4-201ENST00000377575 TGFB1I1O43294 461 aa18.14■□□□□ 0.49
HMGN4-201ENST00000377575 OR4Q2P0C623 313 aa18.14■□□□□ 0.49
HMGN4-201ENST00000377575 PTPN2P17706 415 aa18.14■□□□□ 0.49
HMGN4-201ENST00000377575 NDUFA8P51970 172 aa18.14■□□□□ 0.49
HMGN4-201ENST00000377575 PSMD2Q13200 908 aa18.14■□□□□ 0.49
HMGN4-201ENST00000377575 GPR17Q13304 367 aa18.14■□□□□ 0.49
HMGN4-201ENST00000377575 IQCEQ6IPM2 695 aa18.14■□□□□ 0.49
HMGN4-201ENST00000377575 MTSS1LQ765P7 747 aa18.14■□□□□ 0.49
HMGN4-201ENST00000377575 CBWD2Q8IUF1 395 aa18.14■□□□□ 0.49
HMGN4-201ENST00000377575 THEM5Q8N1Q8 247 aa18.14■□□□□ 0.49
HMGN4-201ENST00000377575 LRRC52Q8N7C0 313 aa18.14■□□□□ 0.49
HMGN4-201ENST00000377575 C1orf127Q8N9H9 656 aa18.14■□□□□ 0.49
HMGN4-201ENST00000377575 FSIP1Q8NA03 581 aa18.14■□□□□ 0.49
HMGN4-201ENST00000377575 GOLGA5Q8TBA6 731 aa18.14■□□□□ 0.49
HMGN4-201ENST00000377575 FGF13Q92913 245 aa18.14■□□□□ 0.49
HMGN4-201ENST00000377575 CCDC47Q96A33 483 aaKnown RBP18.14■□□□□ 0.49
HMGN4-201ENST00000377575 PGLYRP2Q96PD5 576 aa18.14■□□□□ 0.49
HMGN4-201ENST00000377575 KCNH6Q9H252 994 aa18.14■□□□□ 0.49
HMGN4-201ENST00000377575 AGAP1Q9UPQ3 857 aa18.14■□□□□ 0.49
HMGN4-201ENST00000377575 MRPS23Q9Y3D9 190 aaKnown RBP18.14■□□□□ 0.49
HMGN4-201ENST00000377575 ANHXE9PGG2 379 aa18.13■□□□□ 0.49
HMGN4-201ENST00000377575 KLRC4O43908 158 aa18.13■□□□□ 0.49
HMGN4-201ENST00000377575 TNNC2P02585 160 aa18.13■□□□□ 0.49
HMGN4-201ENST00000377575 KRT19P08727 400 aa18.13■□□□□ 0.49
HMGN4-201ENST00000377575 CYP2J2P51589 502 aa18.13■□□□□ 0.49
HMGN4-201ENST00000377575 TWF1Q12792 350 aa18.13■□□□□ 0.49
HMGN4-201ENST00000377575 HTR4Q13639 388 aa18.13■□□□□ 0.49
HMGN4-201ENST00000377575 SNRNP35Q16560 246 aaKnown RBP18.13■□□□□ 0.49
HMGN4-201ENST00000377575 KNOP1Q1ED39 458 aaKnown RBP18.13■□□□□ 0.49
HMGN4-201ENST00000377575 WDR49Q8IV35 697 aa18.13■□□□□ 0.49
HMGN4-201ENST00000377575 CSGALNACT2Q8N6G5 542 aa18.13■□□□□ 0.49
HMGN4-201ENST00000377575 XXYLT1Q8NBI6 393 aa18.13■□□□□ 0.49
HMGN4-201ENST00000377575 LEMD2Q8NC56 503 aa18.13■□□□□ 0.49
HMGN4-201ENST00000377575 ITFG1Q8TB96 612 aa18.13■□□□□ 0.49
HMGN4-201ENST00000377575 CCDC34Q96HJ3 373 aa18.13■□□□□ 0.49
HMGN4-201ENST00000377575 CORO1BQ9BR76 489 aa18.13■□□□□ 0.49
HMGN4-201ENST00000377575 INTS13Q9NVM9 706 aa18.13■□□□□ 0.49
HMGN4-201ENST00000377575 FBXL21Q9UKT6 434 aa18.13■□□□□ 0.49
HMGN4-201ENST00000377575 YIPF1Q9Y548 306 aa18.13■□□□□ 0.49
HMGN4-201ENST00000377575 ZDBF2Q9HCK1 2354 aa18.13■□□□□ 0.49
HMGN4-201ENST00000377575 MTMR11A4FU01 709 aa18.12■□□□□ 0.49
HMGN4-201ENST00000377575 ZNF197O14709 1029 aa18.12■□□□□ 0.49
HMGN4-201ENST00000377575 CLIC2O15247 247 aa18.12■□□□□ 0.49
HMGN4-201ENST00000377575 PRPF40AO75400 957 aaKnown RBP18.12■□□□□ 0.49
HMGN4-201ENST00000377575 RBP5P82980 135 aa18.12■□□□□ 0.49
HMGN4-201ENST00000377575 BFSP1Q12934 665 aa18.12■□□□□ 0.49
HMGN4-201ENST00000377575 MYO1EQ12965 1108 aa18.12■□□□□ 0.49
HMGN4-201ENST00000377575 KMT5BQ4FZB7 885 aa18.12■□□□□ 0.49
HMGN4-201ENST00000377575 WSCD1Q658N2 575 aa18.12■□□□□ 0.49
HMGN4-201ENST00000377575 PDZD4Q76G19 769 aaPredicted RBP18.12■□□□□ 0.49
HMGN4-201ENST00000377575 NPAS3Q8IXF0 933 aa18.12■□□□□ 0.49
HMGN4-201ENST00000377575 C12orf56Q8IXR9 622 aa18.12■□□□□ 0.49
HMGN4-201ENST00000377575 OR10T2Q8NGX3 314 aa18.12■□□□□ 0.49
HMGN4-201ENST00000377575 RSAD2Q8WXG1 361 aa18.12■□□□□ 0.49
HMGN4-201ENST00000377575 ZNF512Q96ME7 567 aaPredicted RBP18.12■□□□□ 0.49
HMGN4-201ENST00000377575 FNBP1Q96RU3 617 aa18.12■□□□□ 0.49
HMGN4-201ENST00000377575 MFSD1Q9H3U5 465 aa18.12■□□□□ 0.49
HMGN4-201ENST00000377575 ASAH2Q9NR71 780 aa18.12■□□□□ 0.49
HMGN4-201ENST00000377575 GDE1Q9NZC3 331 aa18.12■□□□□ 0.49
HMGN4-201ENST00000377575 HSFX1Q9UBD0 423 aa18.12■□□□□ 0.49
HMGN4-201ENST00000377575 NUMBLQ9Y6R0 609 aa18.12■□□□□ 0.49
HMGN4-201ENST00000377575 HUS1O60921 280 aa18.11■□□□□ 0.49
HMGN4-201ENST00000377575 VNN2O95498 520 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms