RNA–Protein interactions for RNA: ENST00000377199.3

TRIM27-202, Transcript of tripartite motif containing 27, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM27, Length 2,967 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-202ENST00000377199 NXF1Q9UBU9 619 aaKnown RBP17.22■□□□□ 0.35
TRIM27-202ENST00000377199 RASA4BC9J798 803 aa17.21■□□□□ 0.35
TRIM27-202ENST00000377199 RASA4O43374 803 aa17.21■□□□□ 0.35
TRIM27-202ENST00000377199 ZC3H11AO75152 810 aaKnown RBP eCLIP17.21■□□□□ 0.351e-11■■■■□ 21.9
TRIM27-202ENST00000377199 UBOX5O94941 541 aa17.21■□□□□ 0.35
TRIM27-202ENST00000377199 ARSEP51690 589 aa17.21■□□□□ 0.35
TRIM27-202ENST00000377199 MYL6P60660 151 aa17.21■□□□□ 0.35
TRIM27-202ENST00000377199 GPS1Q13098 491 aa17.21■□□□□ 0.35
TRIM27-202ENST00000377199 KLF1Q13351 362 aaPredicted RBP17.21■□□□□ 0.35
TRIM27-202ENST00000377199 SNCBQ16143 134 aa17.21■□□□□ 0.35
TRIM27-202ENST00000377199 SYCP2LQ5T4T6 812 aa17.21■□□□□ 0.35
TRIM27-202ENST00000377199 PIGWQ7Z7B1 504 aa17.21■□□□□ 0.35
TRIM27-202ENST00000377199 CROCCP2Q86T23 111 aa17.21■□□□□ 0.35
TRIM27-202ENST00000377199 FEZF2Q8TBJ5 459 aa17.21■□□□□ 0.35
TRIM27-202ENST00000377199 MAIP1Q8WWC4 291 aa17.21■□□□□ 0.35
TRIM27-202ENST00000377199 SERPINB12Q96P63 405 aa17.21■□□□□ 0.35
TRIM27-202ENST00000377199 TMEM121Q9BTD3 319 aa17.21■□□□□ 0.35
TRIM27-202ENST00000377199 ROPN1BQ9BZX4 212 aaPredicted RBP17.21■□□□□ 0.35
TRIM27-202ENST00000377199 ZWILCHQ9H900 591 aa17.21■□□□□ 0.35
TRIM27-202ENST00000377199 VPS37BQ9H9H4 285 aa17.21■□□□□ 0.35
TRIM27-202ENST00000377199 ROPN1Q9HAT0 212 aaPredicted RBP17.21■□□□□ 0.35
TRIM27-202ENST00000377199 KIAA1217Q5T5P2 1943 aa17.21■□□□□ 0.35
TRIM27-202ENST00000377199 MAFGO15525 162 aa17.21■□□□□ 0.35
TRIM27-202ENST00000377199 ASAP2O43150 1006 aa17.21■□□□□ 0.35
TRIM27-202ENST00000377199 GJB1P08034 283 aa17.21■□□□□ 0.35
TRIM27-202ENST00000377199 MFSD5Q6N075 450 aa17.21■□□□□ 0.35
TRIM27-202ENST00000377199 THNSL1Q8IYQ7 743 aa17.21■□□□□ 0.35
TRIM27-202ENST00000377199 REPS2Q8NFH8 660 aa17.21■□□□□ 0.35
TRIM27-202ENST00000377199 CAMKK2Q96RR4 588 aa17.21■□□□□ 0.35
TRIM27-202ENST00000377199 SENP7Q9BQF6 1050 aa17.21■□□□□ 0.35
TRIM27-202ENST00000377199 PORCNQ9H237 461 aa17.21■□□□□ 0.35
TRIM27-202ENST00000377199 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.21■□□□□ 0.35
TRIM27-202ENST00000377199 AGAP1Q9UPQ3 857 aa17.21■□□□□ 0.35
TRIM27-202ENST00000377199 EXOC1LA0A1B0GW35 172 aa17.2■□□□□ 0.34
TRIM27-202ENST00000377199 SNX3O60493 162 aa17.2■□□□□ 0.34
TRIM27-202ENST00000377199 KRT19P08727 400 aa17.2■□□□□ 0.34
TRIM27-202ENST00000377199 CD19P15391 556 aa17.2■□□□□ 0.34
TRIM27-202ENST00000377199 STXBP2Q15833 593 aa17.2■□□□□ 0.34
TRIM27-202ENST00000377199 DNAJC24Q6P3W2 148 aa17.2■□□□□ 0.34
TRIM27-202ENST00000377199 ZNF677Q86XU0 584 aa17.2■□□□□ 0.34
TRIM27-202ENST00000377199 ANKMY2Q8IV38 441 aa17.2■□□□□ 0.34
TRIM27-202ENST00000377199 C4orf33Q8N1A6 199 aa17.2■□□□□ 0.34
TRIM27-202ENST00000377199 SGSM3Q96HU1 749 aa17.2■□□□□ 0.34
TRIM27-202ENST00000377199 TMEM109Q9BVC6 243 aa17.2■□□□□ 0.34
TRIM27-202ENST00000377199 KDM4CQ9H3R0 1056 aa17.2■□□□□ 0.34
TRIM27-202ENST00000377199 AS3MTQ9HBK9 375 aa17.2■□□□□ 0.34
TRIM27-202ENST00000377199 KIAA1586Q9HCI6 787 aa17.2■□□□□ 0.34
TRIM27-202ENST00000377199 PARVAQ9NVD7 372 aa17.2■□□□□ 0.34
TRIM27-202ENST00000377199 TPX2Q9ULW0 747 aaKnown RBP17.2■□□□□ 0.34
TRIM27-202ENST00000377199 SPATA31C2B4DYI2 1134 aa17.2■□□□□ 0.34
TRIM27-202ENST00000377199 SGK1O00141 431 aa17.2■□□□□ 0.34
TRIM27-202ENST00000377199 MAGEA4P43358 317 aa17.2■□□□□ 0.34
TRIM27-202ENST00000377199 HIRAP54198 1017 aaPredicted RBP17.2■□□□□ 0.34
TRIM27-202ENST00000377199 CAPSQ13938 189 aa17.2■□□□□ 0.34
TRIM27-202ENST00000377199 CCNG2Q16589 344 aa17.2■□□□□ 0.34
TRIM27-202ENST00000377199 CCDC63Q8NA47 563 aa17.2■□□□□ 0.34
TRIM27-202ENST00000377199 CDHR1Q96JP9 859 aa17.2■□□□□ 0.34
TRIM27-202ENST00000377199 NKIRAS1Q9NYS0 192 aa17.2■□□□□ 0.34
TRIM27-202ENST00000377199 TJP2Q9UDY2 1190 aa17.2■□□□□ 0.34
TRIM27-202ENST00000377199 STK38LQ9Y2H1 464 aa17.2■□□□□ 0.34
TRIM27-202ENST00000377199 CSDE1O75534 798 aaKnown RBP17.19■□□□□ 0.34
TRIM27-202ENST00000377199 MAN1A1P33908 653 aa17.19■□□□□ 0.34
TRIM27-202ENST00000377199 PLCB4Q15147 1175 aa17.19■□□□□ 0.34
TRIM27-202ENST00000377199 GPAT2Q6NUI2 795 aa17.19■□□□□ 0.34
TRIM27-202ENST00000377199 PRPF31Q8WWY3 499 aaKnown RBP17.19■□□□□ 0.34
TRIM27-202ENST00000377199 SPOCK2Q92563 424 aa17.19■□□□□ 0.34
TRIM27-202ENST00000377199 PNMA3Q9UL41 463 aa17.19■□□□□ 0.34
TRIM27-202ENST00000377199 NEU2Q9Y3R4 380 aa17.19■□□□□ 0.34
TRIM27-202ENST00000377199 PSTPIP1O43586 416 aa17.19■□□□□ 0.34
TRIM27-202ENST00000377199 KRT15P19012 456 aa17.19■□□□□ 0.34
TRIM27-202ENST00000377199 RAP1GAPP47736 663 aa17.19■□□□□ 0.34
TRIM27-202ENST00000377199 OGDHQ02218 1023 aa17.19■□□□□ 0.34
TRIM27-202ENST00000377199 DALRD3Q5D0E6 543 aaKnown RBP17.19■□□□□ 0.34
TRIM27-202ENST00000377199 DCAF15Q66K64 600 aa17.19■□□□□ 0.34
TRIM27-202ENST00000377199 ZBED8Q8IZ13 594 aa17.19■□□□□ 0.34
TRIM27-202ENST00000377199 SLCO2A1Q92959 643 aa17.19■□□□□ 0.34
TRIM27-202ENST00000377199 USP15Q9Y4E8 981 aaPredicted RBP17.19■□□□□ 0.34
TRIM27-202ENST00000377199 SCINQ9Y6U3 715 aa17.19■□□□□ 0.34
TRIM27-202ENST00000377199 PECAM1P16284 738 aaPredicted RBP17.19■□□□□ 0.34
TRIM27-202ENST00000377199 ATP5DP30049 168 aa17.19■□□□□ 0.34
TRIM27-202ENST00000377199 CETN2P41208 172 aa17.19■□□□□ 0.34
TRIM27-202ENST00000377199 NAMPTP43490 491 aa17.19■□□□□ 0.34
TRIM27-202ENST00000377199 XRRA1Q6P2D8 792 aa17.19■□□□□ 0.34
TRIM27-202ENST00000377199 CEP120Q8N960 986 aa17.19■□□□□ 0.34
TRIM27-202ENST00000377199 CNKSR2Q8WXI2 1034 aa17.19■□□□□ 0.34
TRIM27-202ENST00000377199 CGRRF1Q99675 332 aa17.19■□□□□ 0.34
TRIM27-202ENST00000377199 AGTPBP1Q9UPW5 1226 aa17.19■□□□□ 0.34
TRIM27-202ENST00000377199 CENPFP49454 3210 aa17.18■□□□□ 0.34
TRIM27-202ENST00000377199 A0A0B4J269 797 aa17.18■□□□□ 0.34
TRIM27-202ENST00000377199 SPDYE16A6NNV3 312 aaPredicted RBP17.18■□□□□ 0.34
TRIM27-202ENST00000377199 H0YCG3 227 aa17.18■□□□□ 0.34
TRIM27-202ENST00000377199 NFKBIEO00221 500 aa17.18■□□□□ 0.34
TRIM27-202ENST00000377199 PIK3R2O00459 728 aa17.18■□□□□ 0.34
TRIM27-202ENST00000377199 KCNJ2P63252 427 aa17.18■□□□□ 0.34
TRIM27-202ENST00000377199 TRPC3Q13507 836 aa17.18■□□□□ 0.34
TRIM27-202ENST00000377199 LY6KQ17RY6 165 aa17.18■□□□□ 0.34
TRIM27-202ENST00000377199 TNFAIP8L3Q5GJ75 292 aa17.18■□□□□ 0.34
TRIM27-202ENST00000377199 PLEKHA7Q6IQ23 1121 aa17.18■□□□□ 0.34
TRIM27-202ENST00000377199 KATNAL2Q8IYT4 538 aa17.18■□□□□ 0.34
TRIM27-202ENST00000377199 CCDC77Q9BR77 488 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms