RNA–Protein interactions for RNA: ENST00000376643.6

HDAC6-204, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-204ENST00000376643 LILRA4P59901 499 aa15.98■□□□□ 0.15
HDAC6-204ENST00000376643 SPAG1Q07617 926 aa15.98■□□□□ 0.15
HDAC6-204ENST00000376643 ALCAMQ13740 583 aa15.98■□□□□ 0.15
HDAC6-204ENST00000376643 PDCD11Q14690 1871 aaKnown RBP15.98■□□□□ 0.15
HDAC6-204ENST00000376643 KARSQ15046 597 aaKnown RBP15.98■□□□□ 0.15
HDAC6-204ENST00000376643 JADE1Q6IE81 842 aa15.98■□□□□ 0.15
HDAC6-204ENST00000376643 MFSD6LQ8IWD5 586 aa15.98■□□□□ 0.15
HDAC6-204ENST00000376643 CSGALNACT1Q8TDX6 532 aa15.98■□□□□ 0.15
HDAC6-204ENST00000376643 TCEAL4Q96EI5 215 aa15.98■□□□□ 0.15
HDAC6-204ENST00000376643 ZNF560Q96MR9 790 aa15.98■□□□□ 0.15
HDAC6-204ENST00000376643 BLOC1S4Q9NUP1 217 aa15.98■□□□□ 0.15
HDAC6-204ENST00000376643 ZSCAN32Q9NX65 697 aa15.98■□□□□ 0.15
HDAC6-204ENST00000376643 CEP72Q9P209 647 aa15.98■□□□□ 0.15
HDAC6-204ENST00000376643 DOCK6Q96HP0 2047 aa15.97■□□□□ 0.15
HDAC6-204ENST00000376643 VPS37CA5D8V6 355 aaPredicted RBP15.97■□□□□ 0.15
HDAC6-204ENST00000376643 DPYSL4O14531 572 aa15.97■□□□□ 0.15
HDAC6-204ENST00000376643 IL18RAPO95256 599 aa15.97■□□□□ 0.15
HDAC6-204ENST00000376643 CYP11A1P05108 521 aa15.97■□□□□ 0.15
HDAC6-204ENST00000376643 SDHBP21912 280 aa15.97■□□□□ 0.15
HDAC6-204ENST00000376643 TARSP26639 723 aaKnown RBP15.97■□□□□ 0.15
HDAC6-204ENST00000376643 GDI1P31150 447 aa15.97■□□□□ 0.15
HDAC6-204ENST00000376643 PNPLA4P41247 253 aa15.97■□□□□ 0.15
HDAC6-204ENST00000376643 TAF6P49848 677 aa15.97■□□□□ 0.15
HDAC6-204ENST00000376643 CSTF1Q05048 431 aaKnown RBP15.97■□□□□ 0.15
HDAC6-204ENST00000376643 DUSP4Q13115 394 aa15.97■□□□□ 0.15
HDAC6-204ENST00000376643 GRM2Q14416 872 aa15.97■□□□□ 0.15
HDAC6-204ENST00000376643 C9orf57Q5W0N0 161 aa15.97■□□□□ 0.15
HDAC6-204ENST00000376643 CENPPQ6IPU0 288 aa15.97■□□□□ 0.15
HDAC6-204ENST00000376643 MAMSTRQ6ZN01 415 aa15.97■□□□□ 0.15
HDAC6-204ENST00000376643 FAM3CQ92520 227 aa15.97■□□□□ 0.15
HDAC6-204ENST00000376643 SENP8Q96LD8 212 aa15.97■□□□□ 0.15
HDAC6-204ENST00000376643 PGLYRP2Q96PD5 576 aa15.97■□□□□ 0.15
HDAC6-204ENST00000376643 HAPLN2Q9GZV7 340 aa15.97■□□□□ 0.15
HDAC6-204ENST00000376643 C8orf33Q9H7E9 229 aaPredicted RBP15.97■□□□□ 0.15
HDAC6-204ENST00000376643 ZNF334Q9HCZ1 680 aaPredicted RBP15.97■□□□□ 0.15
HDAC6-204ENST00000376643 OBP2AQ9NY56 170 aa15.97■□□□□ 0.15
HDAC6-204ENST00000376643 AGO2Q9UKV8 859 aaKnown RBP15.97■□□□□ 0.15
HDAC6-204ENST00000376643 TIMM13Q9Y5L4 95 aaPredicted RBP15.97■□□□□ 0.15
HDAC6-204ENST00000376643 STYXL1Q9Y6J8 313 aa15.97■□□□□ 0.15
HDAC6-204ENST00000376643 NOTCH4Q99466 2003 aa15.97■□□□□ 0.15
HDAC6-204ENST00000376643 GVINP1Q7Z2Y8 2422 aa15.96■□□□□ 0.15
HDAC6-204ENST00000376643 MTMR11A4FU01 709 aa15.96■□□□□ 0.15
HDAC6-204ENST00000376643 PIRO00625 290 aa15.96■□□□□ 0.15
HDAC6-204ENST00000376643 CHADO15335 359 aa15.96■□□□□ 0.15
HDAC6-204ENST00000376643 LDHAP00338 332 aaKnown RBP15.96■□□□□ 0.15
HDAC6-204ENST00000376643 CDC25CP30307 473 aa15.96■□□□□ 0.15
HDAC6-204ENST00000376643 CCR2P41597 374 aa15.96■□□□□ 0.15
HDAC6-204ENST00000376643 CCR3P51677 355 aa15.96■□□□□ 0.15
HDAC6-204ENST00000376643 LRRC32Q14392 662 aa15.96■□□□□ 0.15
HDAC6-204ENST00000376643 TEAD2Q15562 447 aa15.96■□□□□ 0.15
HDAC6-204ENST00000376643 TAF12Q16514 161 aa15.96■□□□□ 0.15
HDAC6-204ENST00000376643 SV2CQ496J9 727 aa15.96■□□□□ 0.15
HDAC6-204ENST00000376643 VITQ6UXI7 678 aa15.96■□□□□ 0.15
HDAC6-204ENST00000376643 CCDC73Q6ZRK6 1079 aa15.96■□□□□ 0.15
HDAC6-204ENST00000376643 SV2BQ7L1I2 683 aa15.96■□□□□ 0.15
HDAC6-204ENST00000376643 HS6ST3Q8IZP7 471 aa15.96■□□□□ 0.15
HDAC6-204ENST00000376643 FAM200AQ8TCP9 573 aa15.96■□□□□ 0.15
HDAC6-204ENST00000376643 SPPL2BQ8TCT7 592 aa15.96■□□□□ 0.15
HDAC6-204ENST00000376643 POMGNT1Q8WZA1 660 aa15.96■□□□□ 0.15
HDAC6-204ENST00000376643 PSMG2Q969U7 264 aa15.96■□□□□ 0.15
HDAC6-204ENST00000376643 PLA2G2FQ9BZM2 168 aa15.96■□□□□ 0.15
HDAC6-204ENST00000376643 CHRDQ9H2X0 955 aa15.96■□□□□ 0.15
HDAC6-204ENST00000376643 PRMT8Q9NR22 394 aaPredicted RBP15.96■□□□□ 0.15
HDAC6-204ENST00000376643 NCDNQ9UBB6 729 aa15.96■□□□□ 0.15
HDAC6-204ENST00000376643 PIAS3Q9Y6X2 628 aa15.96■□□□□ 0.15
HDAC6-204ENST00000376643 A0A1W2PRU2 124 aa15.95■□□□□ 0.14
HDAC6-204ENST00000376643 ANO9A1A5B4 782 aa15.95■□□□□ 0.14
HDAC6-204ENST00000376643 HEPACAM2A8MVW5 462 aa15.95■□□□□ 0.14
HDAC6-204ENST00000376643 LRRN2O75325 713 aa15.95■□□□□ 0.14
HDAC6-204ENST00000376643 CD2BP2O95400 341 aaKnown RBP15.95■□□□□ 0.14
HDAC6-204ENST00000376643 NFICP08651 508 aa15.95■□□□□ 0.14
HDAC6-204ENST00000376643 CD72P21854 359 aa15.95■□□□□ 0.14
HDAC6-204ENST00000376643 WEE1P30291 646 aa15.95■□□□□ 0.14
HDAC6-204ENST00000376643 NMT1P30419 496 aaKnown RBP15.95■□□□□ 0.14
HDAC6-204ENST00000376643 PLCB2Q00722 1185 aa15.95■□□□□ 0.14
HDAC6-204ENST00000376643 PTPAQ15257 358 aa15.95■□□□□ 0.14
HDAC6-204ENST00000376643 ARHGAP29Q52LW3 1261 aa15.95■□□□□ 0.14
HDAC6-204ENST00000376643 RRAGBQ5VZM2 374 aa15.95■□□□□ 0.14
HDAC6-204ENST00000376643 STXBP4Q6ZWJ1 553 aa15.95■□□□□ 0.14
HDAC6-204ENST00000376643 ZNF720Q7Z2F6 126 aa15.95■□□□□ 0.14
HDAC6-204ENST00000376643 DCP1BQ8IZD4 617 aaKnown RBP15.95■□□□□ 0.14
HDAC6-204ENST00000376643 MAML2Q8IZL2 1156 aaPredicted RBP15.95■□□□□ 0.14
HDAC6-204ENST00000376643 SHKBP1Q8TBC3 707 aa15.95■□□□□ 0.14
HDAC6-204ENST00000376643 CACTINQ8WUQ7 758 aaKnown RBP15.95■□□□□ 0.14
HDAC6-204ENST00000376643 LRRC27Q9C0I9 530 aa15.95■□□□□ 0.14
HDAC6-204ENST00000376643 MRPL44Q9H9J2 332 aaKnown RBP15.95■□□□□ 0.14
HDAC6-204ENST00000376643 MTF2Q9Y483 593 aaPredicted RBP15.95■□□□□ 0.14
HDAC6-204ENST00000376643 PCDHB13Q9Y5F0 798 aa15.95■□□□□ 0.14
HDAC6-204ENST00000376643 SRPRBQ9Y5M8 271 aaKnown RBP15.95■□□□□ 0.14
HDAC6-204ENST00000376643 MORC2Q9Y6X9 1032 aaPredicted RBP15.95■□□□□ 0.14
HDAC6-204ENST00000376643 CFAP54Q96N23 3096 aa15.94■□□□□ 0.14
HDAC6-204ENST00000376643 MYO15AQ9UKN7 3530 aa15.94■□□□□ 0.14
HDAC6-204ENST00000376643 CYB561D2O14569 222 aa15.94■□□□□ 0.14
HDAC6-204ENST00000376643 MOSPD3O75425 235 aa15.94■□□□□ 0.14
HDAC6-204ENST00000376643 OR4Q2P0C623 313 aa15.94■□□□□ 0.14
HDAC6-204ENST00000376643 ACOT2P49753 483 aa15.94■□□□□ 0.14
HDAC6-204ENST00000376643 CUL4AQ13619 759 aa15.94■□□□□ 0.14
HDAC6-204ENST00000376643 MGAT5BQ3V5L5 792 aa15.94■□□□□ 0.14
HDAC6-204ENST00000376643 DNAJB7Q7Z6W7 309 aaPredicted RBP15.94■□□□□ 0.14
HDAC6-204ENST00000376643 TMC8Q8IU68 726 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms